Nothobranchius furzeri (turquoise killifish): 107391933
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Entry
107391933 CDS
T05163
Symbol
smoc1
Name
(RefSeq) SPARC-related modular calcium-binding protein 1
KO
K24354
SPARC-related modular calcium-binding protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107391933 (smoc1)
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107391933 (smoc1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Thyroglobulin_1
Thyroglob_assoc
SPARC_Ca_bdg
Kazal_2
CFAI_KAZAL
EF-hand_7
Kazal_1
Fibrinogen_aC
Motif
Other DBs
NCBI-GeneID:
107391933
NCBI-ProteinID:
XP_015824932
UniProt:
A0A9D3BBF4
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Position
sgr16:complement(17463263..17507475)
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AA seq
504 aa
AA seq
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MMLLSGVLVLTFSCFLAPLLLCYLPEVSAQKSGSRWLIGDRDSHCGISCSRTLGKSVCGS
DGRSYETGCELQKARCRDKTLTLAHRGRCRAKSFQHPVAPAPTSSLEGRDVESKDASQSK
CRLERNAALELSRRPQEAIFIPECNEDGTYAQVQCHTLTGYCWCVTNDGKPVSGSSVHNR
TPVCSGNLSEYMGTHAGKSGLSESVTDKPPGTPTTGKRDEGSKPTPTMETHISPEGEEIT
APTLWKKQLVSQENKQNSSTVRRQGSFTLWSNACCWFQELSERQIALDEAGRSPHRDFFI
PDCGTGGLYKAVQCHQSTGYCWCVLVDTGRPIPGTSTRYKTPECDEAARSQISGAYDPFQ
DRPLTGCPEGKKVEFVTSLLDALTTDMVQAINSPAPSGGGRFVEPDPSHTLEERVVHWYF
AQLDNNSSHDINKKELKPFKRYLKKKAKPKKCARKFTDYCDLNKDRAISLQELKGCLGVS
KEGSSVSSGNLGALPGSHLFSRLA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctgtcaggcgtccttgttttgactttttcctgctttttggctcctctgctt
ctctgttacctacctgaagtctcagcacagaagtctggctcgcggtggctgattggagac
agagacagtcactgtgggatcagctgctcacggactcttggcaagtcggtgtgcggttcc
gatgggcggagctatgagacgggctgcgaacttcagaaggcacgctgcagagataagact
ctaacactggcacacagaggcaggtgtcgagctaaaagcttccagcatccggtggctcca
gctccaacgtccagcctcgaagggagggatgtcgaatctaaagatgcgagtcagtccaag
tgccgtttggagaggaacgccgctctggagctgtcacggaggcctcaggaggccattttt
atcccagaatgcaacgaggatggaacatatgcccaggttcagtgccatactctgacgggt
tattgctggtgtgtcaccaacgatggcaagccagtgagtggctcctctgtgcacaacagg
acaccagtgtgttcaggaaatctcagtgaatatatgggaactcatgctgggaagagtgga
ctgtcagagtcggtaactgataaaccacctgggacaccgaccaccggtaaaagagatgag
ggctccaagcccacacccaccatggagacccacatctcccctgagggtgaagagataacc
gctccaacactctggaaaaaacagctggtttctcaggagaataagcaaaacagctccact
gtcagaaggcaaggttccttcactctttggagcaatgcttgttgctggttccaagaactt
agtgagagacagatcgccctggacgaggctgggaggagtcctcacagagacttttttatt
ccagactgtgggaccggaggtctttacaaggcagtccagtgccaccagtccactggctac
tgctggtgtgttctggtggacacgggacggcccattccaggaacgtccaccaggtacaag
acgccggagtgtgacgaagctgcacgatcccaaatctcaggggcatatgatccatttcag
gacagaccgcttacaggctgcccggaggggaagaaagtggaattcgttacaagcttgtta
gatgccctcaccacagacatggtgcaggccataaactcaccagccccctctggtggcggg
aggtttgttgaacctgaccccagtcacactctggaggaacgagtggtgcactggtacttt
gcccagctggacaacaacagcagccacgacatcaacaagaaagaattaaaacctttcaag
aggtacctgaagaagaaagccaaacctaagaaatgtgcccgcaagtttaccgactactgt
gacctgaataaggacagggcaatttccctgcaggagctgaagggctgcctcggcgttagc
aaagagggtagctcagtgtcaagtggcaacctaggggcattgccagggtcacatttattc
agtcgcctggcgtaa
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