Nothobranchius furzeri (turquoise killifish): 107392063
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Entry
107392063 CDS
T05163
Symbol
stag1
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107392063 (stag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107392063 (stag1)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
107392063 (stag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
107392063
NCBI-ProteinID:
XP_015825111
UniProt:
A0A1A8UFQ6
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Position
sgr16:21562045..21613756
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AA seq
1260 aa
AA seq
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MITSELPVLQDSSNESGATEAVGLSMSMGEMEDPEMKGKKKRGRPGKQAQTFNKKPRKTP
AEKPMGMVRGRGKANGVAQHNGNAGDPVTLFEVVKLGKSAMQSVVDEWIESYKQDRDLAL
LDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPMWKKFRYN
FCEFICVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVA
LNLSIHQDNTQRQYEAERNKIVVKRANEKLELLLQKRKELQENQDEIENMMNSIFKGIFV
HRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNL
YTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSEDALSNEDCENVY
HLVYSAHRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRSSPNGNLIRMLVLFFLESEL
HEHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEMLSDRQESALIELMVCTIRQAA
EAHPPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIMALPMLLSKYQADAEKVANLLQIPQ
FFDLDVYSAGRMEKHLDALLKQIRLVVEKHIETDVLEACSKTYSILCSEEYTIMNRVDIA
RSQLIDEMADRFAHSVEELLQEGEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDLFGNCY
RLLKAGIEQGSMPEQIAVQALQCSHYSILWQLVKITEGVPSKDDLIALRRVVKSFLAVCQ
QCLSNVNTLVKEQAFMLLCDLLMIFSHQLTSGGREGLQPLVFNPDGTLQNELLNFVLDHV
FIDQDDENQSMEGDEEDEANKIEALHKRRNLLAAFCKLIIYDIVDMPAAADIFKHYMKYY
NDYGDIIKETLSKTRQTDKILCAKTLILSLQQLFNELLQDQGPNLDRTSSHVSGIKELAR
RFALTFGLDQIKTREAVATLHKDGIEFAFKYQNPRGPEFPPINLAFLEVLSEFSSKLIRQ
DKKTVHSYLEKFMSESMSERREDVWLPLISYRNSLLTGGDEDHMSVTSGSSSKTGSVRSK
KGRPPLHKKRIEEESSVESSWMMRNDTLQTPGALQTPQLTSTVLRENRPAEHLPDPDSEP
GSENDYVHNPQMQMSWLGQQKMEEVNRKDRTSMNYIKSRSNQGVRQTVRGLMEDDAEPIF
EDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFTMPMF
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcggagcttccagtcctccaggactcctccaatgagtctggagcaacagaa
gctgtgggtctgagcatgagcatgggtgagatggaagaccccgagatgaaagggaagaag
aaaagagggaggcccggaaaacaggcgcagacgttcaataagaagcctcggaagacgccg
gcagagaagcccatggggatggtcagaggccgggggaaggcaaacggcgtggctcagcac
aacgggaatgcaggagaccccgtcacgctctttgaagtcgtcaaacttggtaaaagtgca
atgcagtctgtagtggacgagtggatcgagtcctacaaacaagaccgggacctggcactc
ctggacctgatcaactttttcatccagtgctcgggttgcaaaggcactgtgaggatagag
atgttcaggaacatgcagaacgcagagatcatccgtaagatgacggaggagtttgatgag
gacagtggcgactatcctctgaccatgccaggccccatgtggaaaaagttccgctacaac
ttctgcgagttcatctgcgttctgatccgccagtgtcagtacagcatcatctatgacgag
tacatgatggacacggtgatctccctcctcactgggctgtcagactcacaggtccgagcc
ttcaggcacacgtccacgctcgcagcgatgaagctgatgacggcgctggtgaacgtggct
ctgaacctcagcattcaccaggacaacacccagagacagtacgaggccgagaggaacaag
atcgttgtcaagcgggccaacgagaagctggagctgctgctgcagaagaggaaggagctc
caggagaaccaagatgaaatcgagaacatgatgaactccatcttcaagggcatctttgtg
catcgctacagggatgccatcgctgagatccgagccatttgcatcgaggagatcggtgtg
tggatgaagatgtacagcgacgcgtttctcaacgacagttatctaaaatatgttggctgg
actctccacgaccggcaaggagaggtgcgtttgaaatgtttgaaggctctgcagaacctc
tacacaaaccgagagctgtttccaaagctggagcttttcaccaatcgcttcaaggaccga
atagtctcgatgacgctggataaggagtatgacgtggccgtggaggccatcagactggtt
acactcatcctgcagggcagtgaggacgccttgtcgaatgaagactgtgagaatgtttac
cacctggtttactctgctcaccgaccggtggctgttgctgctggagagttccttcacagg
aaattgttcagtcgccacgacccacaggcagaagaagccctggctaaacgccgagggagg
agcagtcccaacggaaacctcatccgcatgctggtcctcttcttcctggagagcgagctt
cacgagcacgcagcgtatctggttgactcgctgtgggaaagttcacaggagctgctgaag
gactgggagtgcatgactgaactactgctggaggagccagttcagggagaagagatgctt
tcagacagacaggagagcgcgctgatagagctgatggtgtgcaccatccgacaggcagcc
gaggcacatccacctgttggcagaggcactggcaaacgggttctgacagcaaaggagaga
aaaacccagatagatgataagaataagctgactgagcacttcatcatggctctgcccatg
ttgttatctaagtaccaggcagatgccgagaaggtcgccaatcttctgcagatcccgcag
ttctttgacctggacgtgtacagcgccgggcgcatggagaagcacctggatgccttactg
aagcagatccggctggtggtggaaaagcacattgagacggacgtgctggaggcctgcagc
aaaacctatagcatcctctgctcggaggagtacaccatcatgaaccgcgtggacatcgcc
cgctcacagctcatcgatgagatggccgaccggttcgcacactcggttgaggagctgctg
caggagggtgaggaagcggatgatgacgacatctacaacgttctgtctacccttaagaga
ctcacagccttccacaacgcccatgacttaacgcggtgggatttgtttggaaattgctac
cgcctccttaaggcgggcatcgagcagggctccatgccggagcagatcgccgtccaggcg
ctccagtgctcccactactccatcctctggcagctggtgaagatcactgagggcgttccc
agcaaggatgacctcatcgctctcaggagagtggtcaagtctttcttggccgtgtgccag
cagtgcctgtccaatgtcaacactttagtaaaagaacaggcgttcatgctgctctgcgac
ctgctgatgatcttcagccaccagctgacctctggggggagggagggcctccagccgctc
gtcttcaaccctgacggcactctgcaaaacgagcttctgaactttgtcctggatcacgtc
ttcatcgaccaggatgatgagaaccagagcatggaaggagacgaggaggacgaagccaac
aagatcgaagctcttcacaagaggaggaacctgctggcagctttctgtaaactcatcatc
tatgacatcgtagacatgcctgctgctgctgacattttcaaacactacatgaagtactac
aacgattacggtgacatcatcaaagaaacgctcagtaaaaccagacagactgataagatt
ctctgtgccaagactctcatcctcagtctgcagcagctgttcaacgagctgctgcaggac
cagggtcccaacttggaccgaacgtcgtctcacgtgagcggcatcaaggagctggctcgc
cgcttcgccctcacctttggcctggatcagatcaaaaccagagaagctgttgcgacgctt
cacaaggatggaatagagtttgccttcaagtatcagaatcctcgaggaccagagttccct
cccatcaacctggccttcctggaggttctgagcgaattttcctccaaactaattcgccaa
gacaaaaagacggttcactcctacctggagaagttcatgtcggagtcgatgtcggagcgt
cgggaggatgtgtggctgccactgatctcgtacaggaacagcctgctgacgggcggagac
gaggaccacatgtccgtcacgtcgggctccagcagcaagaccggctcagtccgcagcaag
aagggacgaccgccgctgcacaagaaacgcatcgaggaagagagcagtgtggagagctct
tggatgatgcgtaacgacaccctccagacaccgggggcgctgcagactccccagctcact
tcaacagtcctcagagagaacaggcctgcagaacacttgccagatccagactccgagccg
ggatcagagaacgactacgtccacaatcctcagatgcagatgtcgtggctcggccagcag
aaaatggaggaggtgaacaggaaggacagaacaagcatgaactacattaagtcgcgcagc
aatcagggcgtcaggcagaccgtgcgcggcctgatggaggatgatgctgagcccatcttt
gaagatgtgatgatgtcatcacgggggcagctagaggacatgaacgaggagtttgaggac
accatggtgatcgatctgccaccatcgaggaacagacgtgagcgagccgagctgagacca
gacttctttgactcagcggcaatgatagaagacgagtcggggttcaccatgcccatgttc
tga
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