Nothobranchius furzeri (turquoise killifish): 107392087
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Entry
107392087 CDS
T05163
Name
(RefSeq) spectrin beta chain, erythrocytic-like
KO
K27409
spectrin beta, erythrocytic
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nfu04812
]
107392087
Cytoskeleton proteins [BR:
nfu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107392087
Intermediate filaments
Intermediate filament-binding proteins
107392087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Gag_p17
Motif
Other DBs
NCBI-GeneID:
107392087
NCBI-ProteinID:
XP_015825146
UniProt:
A0A8C6Q8K0
LinkDB
All DBs
Position
sgr16:complement(22757103..22802051)
Genome browser
AA seq
2359 aa
AA seq
DB search
MTSTTTSTTDFDNVEITQQYSHINTRFDLSEEELDNDNSSARLFERSRIKALADEREAVQ
KKTFTKWVNSILSRVGCRISDLYLDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENV
DKALQFLKEQRVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIIVETGQADQKETHS
AKDALLLWCQMKTAGYPSVNITNFTTSWKDGMAFNALIHKHRPDVVDYNKLKRSNPTHNL
QNAFNVAEQKLGVTKLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKQLAVEGKRVGKVL
DQAIETEKMIDKYETLASDLLVWIEQTIVVLNNRKLANSLSGVQQQLQAFNTYRTVEKPP
KFQEKGNLEVLLFSIQSRMRANNQRVYTPKEGALVSDINKAWERLERAEHERERVLRDEL
IRQEKLEQMARRFDRKAAMRETWLMENQRLVAQDNFGYDLSAVEAAKKKHDAIETDIAAY
EERVQALVNISKELESERYHDAKRIDVRKDNILRLWDYLQELLKARRGRLDMNLTLQRIF
QEMLHIISWMDEMKARLLSPDFGKHLLEVEDLLQKHALLEKDIALQAERVQSTSAAALKF
ANGDSYKPCDPQVIRDRVQHLDLCYQELCSLAAQRRARLEQSRRFWNLLWEVTELESWIR
EKEQIFSTLDYGKDLTSVQVLQSKHSAFEDELGARRANLEQVLAEGEKMIQAKHFGSPKI
QECMNDIRRQWQQLEELAAFRKQNLQDTQTFFQFQGDADELKAWLLDAKRQMSSDDVGHD
EYTTQRQLKNHNSLRNEAIKNGGTIDALSKQANALPEELQNTPDVQRRLKDIKDLYMELL
TLADLRQSKLDDTMSLYTIFSETDSCELWMSQKETWLVGLEVPEKLEDLEVVQNRLSILA
QDMANVQSRVDNVNKAVKQLEDSRHPRTREIKECQTRLNKRWDAFKAMVEEKKRKVDSAV
SLHNYGLECDETEAWIKEKTRIIESTQDLGNDLAAVMTIQRKLFGIERDLAAIDAKLSFL
RKEADRLAQDHPENAGDILARRGELDAAWDRLKKTLKDREDSLGEVSKLQTFLQEMDDFQ
SWLFKTQKAVASEEMPTSLQEAEDLLSTHSAVREDINNHEEDYQRVRDTGAQVTRGQEDD
PQYQQLEQRLKGLDRGWYELQKMWDSRKNFLDQGLGFQQFMRDSKAVEAILNNQEYTLAH
IDKPDTLAGAEKALKKHEDFVSTMEANEDKVDGARQGGRRLVDNNNLYSGKVQEKMDSIQ
DRRDKNKRRAKDVSEKLRDNRDLQHFLQNTQDLTVWINEKMLTAQDTSYDEARNLHSKWL
KHQAFMAELASNKDWLNKVDQEGQELMESKPEFEPIVMERLAKLHELWDKLESTTQEKAR
LLFDANRSELFDQSLADMKKWLGQLQQHLQSGDEDVKDLTNANILLKKHQMTENQVRDRA
RELEELQEAVRKHGGGKEDQPELEAEQQALQREFQQLLTPLSQRRGKLEAAKSIHQFYRD
LADELLWIEERMPLAMSQEHGNNLQTVQMLLNRNQTLQREIEGHQPRVDEVVERGRRMAA
AAGAEDRPEAERITDQLNELEEAWTRLQQEMAKWRERLNGSNLAQQYYNDADEAEAWIWE
QELYMIADEKAKDEQSAMLMLKRHLILKQAVDDYSASIRRLADRAQRMFAEDHPDGEEII
RRQGQVDKQYAGLRELAEDRRKKLNLTYHHFLLSREVEDLEHWIAERDVVASSQEMGQDL
DHVTLLRDKFRDFARETGMVGQERVDMVNQTIDELIEGGHSEAAALAEWKDGINESWADL
LELIDTRSQLLTASYELLKYFDDGKELVTQIQEKQKELPEDVGEDFSKAESFHRMHAAFE
RDITALGKQVQLFQETAARLHAQYAGDRADAIQATEREVVEAWKGLLDASDGRRTQLVDT
AEKFRFFSMVRDLMAWMESIIQQIETQEKPRDVSSVELLQKYHQGIRSEIEARGAKFTDC
IDLGKALLNRKHRDPAEIKEKLVQLIEKRKEMMFKWDDRWDWLRLLLEVCQFARDASVAE
AWLVAQEPYVTSRDLGHTVDEVEKLLKRHENFEKSTASWEERFSALERLTTLELLALRKQ
QQEMEQFMKDEQRSERESRREDTGFAEESSQLYTIEEQTLSGAADPSSGQQEGTAGDSTV
PIESEMRESASLELEPSFSLVLPKEPERAATMPTEPLSSLAVLQEGTLCRKQDLEGSGKK
ASNRSWNNLYCVLKSGQLSVYKDHKSFGHGTTYHGEDPLPLRDAGWEILTSYKKKKHVAK
LHLADGSEYLFQCKDDEELQRWSEAMEKAVQTLEAEEELGPSGAKTHSLPAPPSSATPPE
TSSAKKDKEKKFNRFAKKK
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgacttccaccacaacttccaccacagattttgacaacgtggagatcacgcagcagtac
agccacatcaacacccgcttcgacctctctgaagaggaactagacaatgacaacagctcc
gccaggctgtttgagcgctcgcgcatcaaggccctcgcagatgagcgcgaggcagttcag
aagaagacctttacaaaatgggtcaactccatcctttcccgagtgggctgtcgcatttct
gacctttacctggacctgcgcgacggacgcatgctcattaaactgctggaggtgttgtca
ggagaacgactgccaaaacccactaaaggccggatgcggatccactgtttggaaaatgtg
gacaaggccctgcagttcctcaaagagcagcgggttcacctggagaacatgggctcacac
gacatagttgatggaaaccatcgcctcatcctcggcctcatctggaccatcatcctgcgt
ttccagatccaggatatcatcgtggaaacgggccaggccgaccagaaggagacacactct
gctaaagatgctcttcttctgtggtgtcagatgaaaactgcaggataccccagtgtcaac
atcaccaactttaccaccagctggaaagacgggatggccttcaacgctctcatacacaaa
catcggccagatgtggtggactacaacaaactcaagaggtccaatcctacccacaacctc
cagaacgcgttcaatgtggcagagcagaagcttggtgtcaccaaactcttagacccagaa
gatgttttcacagagaacccagatgagaaatccatcatcacatatgttgtggctttttat
cactacttctccaagatgaagcagctggcagtggagggaaagagagttggaaaggttctg
gatcaggctattgagacagagaagatgattgataagtacgagacgttggcgtcagacttg
ctggtgtggatcgagcagaccatcgttgtgctgaacaacaggaaacttgccaattctcta
tcaggagtccagcagcagcttcaggccttcaacacctaccgtactgttgagaagccgccc
aaattccaggagaaagggaacctcgaggttttgctcttcagcatccagagtcgtatgagg
gccaacaaccagagggtctacacgcctaaagagggagcgctcgtctcagatatcaacaag
gcctgggagcgtctggagagggcggagcacgagcgggagcgcgtcctgagagacgagctg
atcaggcaggagaagctggaacagatggcgagaagattcgacaggaaggctgccatgagg
gagacctggctcatggagaaccagagactagtggctcaggataactttggttacgacctg
tcagcagtagaagcagcaaagaagaagcacgacgccattgagacggacatcgctgcatac
gaagaacgcgtccaggccttggtgaacatctccaaggagctggagtctgagcgttaccat
gacgccaagcggatcgacgtaagaaaagacaatatcctccgtctgtgggactacctgcag
gagctgttgaaggctcgaagggggcgtctggatatgaacctgaccctgcagaggatcttc
caggagatgttgcacatcatcagctggatggatgaaatgaaggctaggctgctgtcccca
gactttgggaaacacctgctggaggtggaggacttgctacaaaaacacgctttgttagag
aaggacatcgctctgcaggcagagagggtacagagtaccagcgctgctgctctgaagttt
gcaaatggagacagctataagccatgtgatcctcaggtgatccgggacagggtgcagcat
ctggacctgtgctaccaggagctttgttctctcgctgcgcagcgaagagctcgactggag
cagtctcgccgcttctggaacctcctgtgggaggtgacagagctggagagctggatcagg
gagaaggagcagattttctcgacccttgattacggcaaggacctgacgagcgtgcaggtg
ctccagagcaaacacagcgcctttgaggatgagctaggagcccgacgtgccaatctggag
caggtcctggctgaaggggagaagatgatccaagccaagcatttcggctccccaaagatt
caagagtgcatgaacgacatcaggaggcagtggcagcagctggaggagctggctgcgttt
agaaagcagaacctccaggacacccagactttcttccagtttcagggtgacgctgatgaa
cttaaagcctggctgctggacgccaagaggcagatgagcagcgatgacgtgggccacgac
gagtacacaactcagcggcaacttaaaaatcacaacagcttgagaaacgaagctatcaaa
aatggaggcaccattgacgctctgtccaaacaggccaacgctctaccagaggagctacaa
aacactcctgatgttcagagacgtctgaaggatatcaaggacctttacatggagctcctg
actctggctgacctgaggcagtccaagttggatgacaccatgtctctgtacacgatcttc
agcgagacggattcgtgtgagctctggatgagccagaaagagacgtggttagtgggctta
gaagtgcctgagaagctggaggatctggaagtagtccaaaacaggttaagcattttagct
caagatatggcaaacgttcagtcgagagtcgacaacgtcaacaaagctgtgaaacagctt
gaggatagcagacacccacgaaccagagagatcaaagagtgccagacacgactgaataaa
agatgggatgccttcaaggccatggtggaggagaagaagaggaaagtagattctgctgtt
agtttgcacaactacgggttggagtgtgacgagacggaggcctggataaaagaaaagact
cggatcattgaatccacgcaggacttgggcaacgacctggcggctgtcatgacaatccag
aggaaactgtttggcatagagagagatctggccgccatcgacgccaagctttccttcctg
aggaaagaggctgaccggctggctcaggaccatccggaaaatgctggagatatcttggcc
cgcagaggagagctggatgcagcctgggacaggctgaagaagacactgaaggacagggag
gactctttaggtgaggttagtaagttacagaccttcctccaagaaatggacgacttccag
tcctggctattcaagacccagaaggctgtggcatcggaggaaatgcccacctcgctgcaa
gaggctgaggacctgctgagcactcacagcgctgtgcgtgaagacatcaacaaccatgaa
gaggactatcagcgtgtgagggacactggagctcaggtcacacggggtcaggaggacgat
cctcagtaccagcagctggagcagaggctgaagggcttggatcgaggctggtatgagctc
cagaagatgtgggacagtcgcaaaaacttcctggaccagggtctgggctttcagcagttc
atgagggacagcaaggctgtagaggccattctgaacaaccaggagtacacccttgctcac
atagacaagcctgacaccttggctggagcagagaaggctctgaagaagcatgaggacttt
gtgagcaccatggaggccaacgaggacaaggtcgacggtgctcggcagggcgggcggcgg
ctggtggacaacaacaacctgtactctggaaaggttcaggagaaaatggattccatccag
gacaggcgtgacaagaataagagaagagctaaagacgtgtcagaaaagctcagagataac
cgtgacctgcaacacttcctgcaaaacactcaagatctgactgtgtggatcaatgagaag
atgctgactgctcaggacacctcgtatgatgaggccaggaacctccacagcaaatggctc
aaacaccaggccttcatggctgagctggcctccaacaaggactggctcaacaaagtagac
caggaaggtcaggagctgatggagtccaagcctgagtttgagcccattgtgatggagcgt
ctggccaagcttcatgagctgtgggacaaactggagtccaccactcaggagaaggctcgg
ctgctgtttgacgccaaccgctcggagctgttcgaccagagcctggctgatatgaagaag
tggttgggccagcttcagcagcacctacagagtggagacgaggatgtaaaggacctgacg
aatgccaatattctgcttaaaaagcaccagatgacagagaaccaggttcgtgaccgtgcc
cgggagctggaggagctccaggaagccgtcaggaagcacggcggcgggaaggaagaccag
ccggagctggaggcggagcagcaagccctgcagagggagttccagcagctcctcacacct
ctgtcccagcgccggggcaagctggaggctgccaaatccatccatcagttctacagagac
ctggccgatgagcttctctggattgaggagaggatgcccctggcaatgtcacaagagcac
ggcaacaatctccaaaccgtgcagatgctgttaaataggaaccagactttgcagagagaa
atcgagggccaccagccccgcgttgatgaggtggttgagcgaggcaggaggatggcagct
gccgccggcgccgaggacagacccgaggcggagagaatcacggaccagctgaacgagctg
gaggaggcgtggacgcggctgcagcaggagatggccaagtggcgggagaggttgaatggc
tccaacttggcccagcagtattataatgatgctgatgaggccgaggcctggatctgggag
caggagctctacatgattgctgatgagaaggccaaggatgagcagagtgccatgctgatg
ctaaagcgccacttgatcctgaagcaggcagtagacgattattctgcctccattcggagg
ctggccgaccgagcccaaaggatgtttgcagaggaccatcctgacggcgaggagatcatt
aggcgacagggccaagtggataagcaatatgcaggtctgagagagctggcagaggaccgc
aggaagaagctgaacctcacctatcatcacttccttctgagcagagaggtggaggacctg
gaacactggattgcagagagagacgtggtggcctcctctcaggagatgggacaagacctg
gaccacgtcacgcttctcagggataaattcagagactttgcccgggagacgggcatggtg
ggccaggagcgagtggacatggtcaaccagacgatagacgagctaatcgaaggtggacat
agcgaggcagctgcgttggcagagtggaaggacggcatcaacgagagctgggcggacctg
ctggagctcatcgacacccgctctcagctcctcacggcttcctacgaacttctcaagtac
tttgatgatggaaaggagttggtgactcagatccaggagaagcagaaggagctgcctgaa
gacgtgggtgaagatttcagtaaagcagagtccttccacagaatgcacgctgcctttgag
agagacatcaccgccctgggcaaacaggttcaactgttccaggaaacagctgcaaggctt
cacgcccagtacgccggagaccgagcagatgccattcaggccaccgaaagggaggtggtg
gaggcctggaaaggtctgctcgatgcctcagacggtcgccggacgcagctggtggacacg
gctgagaagttccgcttcttcagcatggtccgagacctgatggcctggatggagagcatc
atccagcagatcgagactcaagagaagcccagggatgtctcgtccgtggagctgctgcag
aagtaccaccaggggattcgctcagagatcgaagccagaggagcaaagttcacagactgc
atcgacctgggcaaggccctactgaaccgcaagcaccgagaccctgctgagatcaaagag
aagctggttcagctgattgagaaaaggaaggaaatgatgttcaagtgggatgacagatgg
gactggctgcgactcttgctggaagtgtgtcagttcgcacgggacgcttccgtcgccgag
gcctggctggtcgctcaggagccctacgtgactagcagagacctgggtcacaccgtcgat
gaggtcgagaagctcctcaagaggcacgagaactttgagaaatccaccgccagctgggag
gaacgtttctctgcgctggagcgcctcaccacgctggagctgttggcgttgaggaagcag
caacaggagatggagcagttcatgaaagatgagcaacgctcagaaagggagagcaggagg
gaagacactggctttgcagaagaatcctcacaactctacaccatcgaggagcaaactctg
tctggggcagcagatcccagttcaggccagcaggaggggactgctggtgactccacggtg
cccatagagtcagagatgagagagagtgcatccctggagctggagccctccttctctcta
gtcttacctaaagagcccgagagggcggccaccatgcccacagaacctctcagcagcctg
gccgtgctgcaggagggcacgctgtgccgcaagcaagacttagagggctcggggaagaag
gcctccaacaggtcgtggaacaacctttactgtgtgctgaagtccggtcagctctcagtc
tacaaggaccataaaagttttggtcatgggacgacgtaccacggcgaggaccccctgcct
ctcagagacgccggctgggagatcctcaccagctacaagaagaagaagcacgttgctaag
ctgcatcttgcagatggaagtgaatatttgttccagtgtaaagacgacgaagagctccag
cgctggagcgaggccatggagaaggccgttcagaccctggaagcagaggaggaactaggg
ccctcgggggccaaaacccacagcctccccgcgcccccctcctcagctacaccccctgaa
accagctctgccaagaaagacaaggagaagaagttcaaccgctttgccaagaagaagtga
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integrated database retrieval system
