Nothobranchius furzeri (turquoise killifish): 107392108
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Entry
107392108 CDS
T05163
Name
(RefSeq) transformer-2 protein homolog alpha-like
KO
K12897
transformer-2 protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107392108
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nfu01009
]
107392108
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107392108
Protein phosphatases and associated proteins [BR:
nfu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107392108
Spliceosome [BR:
nfu03041
]
Common components
Common spliceosomal components
SR proteins
107392108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Transformer
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107392108
NCBI-ProteinID:
XP_015825182
UniProt:
A0A1A8AX60
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Position
sgr16:23303867..23310438
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AA seq
282 aa
AA seq
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MSDNEKDFREQDSRAGSSPRGSAKSTSRSKDGSRHSRSRSRSRSKSKSRSRSHRSSRKRY
SRSRSHSRHRRSRSRSRSSGYRRRRSHSRSPMSNRRRHIGNRANPDPSACVGVFGLSLYT
TERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFQNSQDSKEAKEQANGMELDGRRI
RVDFSITKRAHTPTPGIYMGRPTYGGGGGSGGGSSGGSGGGSSRRVSRDYDRGYDRGYDR
GYDRDYDRYDDREYRSYRRRSPSPYYSRGYRSRSRSYSPRHY
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaacgagaaagatttcagggaacaggactcgcgggcaggctcgtcccctcgg
ggctctgcaaagtccaccagtcgctccaaagatgggtctcgccattccaggtcccggtca
cgttctcgatccaaatccaagtctagatctcgttcccatcgaagttcacgcaagcgctac
tcccggtcacgttcccactcccggcaccgccggtccaggagccgatctcgtagctcgggg
taccgccggcgtaggagccatagccgttcccccatgtcaaatcgacgcagacacattgga
aacagggccaacccagaccccagcgcctgtgtcggtgtgtttggtctgagcctctacacc
accgagagggacttgagggaggtgttttcgaaatatggcccgctggctgatgtcaacata
gtgtatgatcagcagtcgcgtcgctcaagaggtttcgcttttgtctattttcaaaatagc
caggactctaaagaggctaaggagcaagctaacggcatggagcttgatggacgcaggatc
agagtggacttttcaattaccaaaagagcccacacccccactcctggaatctacatggga
cgtcccacatatggcgggggtggaggaagtggtggcggcagcagcggaggaagtggtgga
ggttcatcacggcgcgtctcaagggattacgacaggggctacgaccgaggatatgacagg
ggttacgaccgcgactatgatcgttacgatgaccgagagtatcgatcatacagacgcaga
tctccgtccccgtactacagcagaggttaccgctctcggtctcgctcctactcaccacgt
cactactga
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