Nothobranchius furzeri (turquoise killifish): 107392152
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Entry
107392152 CDS
T05163
Name
(RefSeq) collagen alpha-1(X) chain-like isoform X1
KO
K19479
collagen type X alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
107392152
NCBI-ProteinID:
XP_015825256
UniProt:
A0A1A8AR80
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Position
sgr16:complement(24994097..24998189)
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AA seq
651 aa
AA seq
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MLIRPCEMDLRVASILLLVVASAAATGKGYVVKKVVPYNVKSQVVPMAGEPGAPGEPGPE
GPPGPPGENGIGLPGPQGPPGPPGHPGRSIAGKPGTPGGPGKPGVPGEPGERGDTGATGP
QGPRGAPGPSGIPGPAGLSATGKPGPSGLPGAMGPRGEPGLKGHPGVPGLPGAKGDRGIG
VQGPQGETGPQGPVGAPGAPGEAGIGRPGKPGAPGESGKSGSPGRDGAPGPMGPQGPKGH
TGAPGIGVPGKSGENGAPGLPGPVGPKGHQGPAGAPGAPGVPGYGKPGANGEKGERGATG
SPGALGAKGEQGPTGYTGATGATGPTGPIGPQGARGFPGEPGAVGPKGDTGATGPQGLKG
HKGDQGAQGFQGKQGYPGAAGPPGPRGATGPSGDKGHTGAPGTPGAPGIPGPAGPKGHPG
RAGENGASGSDGAPGPRGPAGPQGPAGAPGLKGHPGLPGAPGPAGLAAKGLTGPQGPPGE
PGENGVDGEPGPAGPPGPPGPPGEVVFEKGIGMSEVMVKSPMSAFTATLATAYPPAGSPI
KFNQIVYNAENHYDPESGIFTCQVPGVYYFSYSIHVNGAHALVALYKNDHPVMFTYDEYN
KGFVDQMSGSAVLLLDEHDTVYVQIPDEEANGVFAAENVHCSFSGFLIAST
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgctgattagaccttgcgagatggatttgcgagtggcgagcatcctgctcctcgtcgtg
gcctctgcagcagccactggaaaggggtatgtggtgaagaaagtggtgccctacaacgtt
aagagccaggtagttccaatggcaggtgagcctggtgctccaggtgagcctggccccgag
ggacctcctggccctccaggtgagaatggaattggtctgcccggaccccaaggaccacct
ggacctcccggacatcctggccgatcaattgctggtaaacctggaactccaggcggacct
ggcaaacccggtgtccctggagaacccggcgagaggggagacactggagccactggccct
cagggacctaggggagcccctggaccttctggaattccaggacctgctggcctgtctgct
actggtaaacctggaccctctggtcttcctggagcaatgggaccaagaggagagcctggc
ctgaagggacacccaggtgtgcccggacttccaggtgcaaagggagatagaggaattgga
gtgcaaggacctcaaggtgaaactggacctcaaggacctgtgggagcacctggagctcca
ggtgaagctggaattggtagaccaggcaagccaggtgccccaggcgagtcaggaaagtca
ggtagtccaggtagagatggtgctcctggccccatgggaccacagggacctaagggacac
actggtgccccaggtattggtgttccaggtaaatcaggtgagaatggtgccccaggtctg
cctggtccagttggacctaaaggccaccagggccctgctggagcccccggtgctccagga
gttccaggatatggaaagccaggtgcaaatggtgagaagggagagaggggagctactggt
agtccaggtgccctaggtgcaaagggtgagcaaggtccaacaggatacactggtgctact
ggagccactggtcccactggtcctattggacctcagggtgcaagaggattcccaggtgag
cctggtgctgttggtcctaagggagacacaggtgcaactggacctcagggacttaaggga
cacaagggagatcagggagctcagggcttccaaggcaagcagggctatccaggtgcagct
ggtcctccaggacccagaggtgccactggcccttcaggtgacaaaggtcatactggtgcc
ccaggtactccaggtgccccaggtattccaggtcctgctggacccaaaggtcatcctgga
cgtgcaggtgagaatggtgcctctggatctgatggtgcccccggtcccagaggacctgcc
ggtccacaaggtcccgctggtgctcctggtcttaagggacacccaggtctgcctggtgct
cctggccctgctggtttggccgctaagggtctaacaggacctcagggcccccctggtgag
cctggtgaaaatggtgttgatggggaacctggcccagctggtcccccaggtcctcctgga
cctcctggtgaggttgtgtttgagaaaggcattggaatgagtgaggttatggtcaagtcc
ccaatgtctgcattcactgcaactctggccactgcctacccccctgctggttctcccatt
aagtttaaccagattgtttacaacgctgagaaccactatgaccctgagtctggcatcttc
acctgtcaggttcctggagtttactacttctcctacagcatccatgttaatggagctcat
gccctggtggctctgtacaagaatgatcatcctgttatgttcacttatgacgagtacaac
aagggattcgtggaccagatgtccggcagtgctgtcctcctgctcgatgagcatgacaca
gtctacgtccagattccagacgaggaggccaatggtgtctttgctgctgagaatgtccac
tgctctttctctgggttcctcattgcctcaacgtga
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