Nothobranchius furzeri (turquoise killifish): 107392299
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Entry
107392299 CDS
T05163
Symbol
tmc6
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfu02000
]
107392299 (tmc6)
03037 Cilium and associated proteins [BR:
nfu03037
]
107392299 (tmc6)
Transporters [BR:
nfu02000
]
Other transporters
Pores ion channels [TC:
1
]
107392299 (tmc6)
Cilium and associated proteins [BR:
nfu03037
]
Other cilia and associated proteins
Stereociliary proteins
107392299 (tmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
107392299
NCBI-ProteinID:
XP_015825520
UniProt:
A0A1A8UJG0
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Position
sgr02:31988671..32012446
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AA seq
819 aa
AA seq
DB search
MARNVNFDLNLIQMEAGIESPTDEEGVHDAFSQLIAEQSLNEDPSLFIELREEDEDDLDN
VANLSNARHRLGEEGMNHDDDGGCYLGRGQQPTDSLIKERWSSDTLKVLSSMPSRTIGRS
RGAIISQYYNKTMKLRRDRQSRPAVRDFSRSARPSIRCHGMEADTPDSWDMEETKRERLV
NNLQNLSVGDRERMIRGMPLSLKEKGDLRKLALQKDKHTHSSSKLHCCSQQKYYIIIALR
HSWYSCLSFLHSLHLWQMPLKRVSSRFGTGVLSYFLFLKTLFLFNIFLVLITGVFLVIPQ
ALHPPTPPANWSSFSGLELLTGAGYFSDSLMYYGYYSNYTLHRNGSSSSRLDLSYNMPLA
YFFTIGMAFFITCMILVYSMSKSFGQSFMIDKSHSILAIKAFSSWDFKVIKESSVKLMSE
NICTQLKELLAEVNQNNVSSTALQKCGRLMVHGLAWTICTAGTAGCAMSIYLFSDYMHNQ
SRAGTGAQGRLQKEASLLALPVLVSLINLLLPGLFNLASWFENYHSPSVRTYVSISRNLL
SKVSVLCVLCYHWLGRIATDSMDHIKCWESYVGQELYRFLIIDFIFTLLDTLCGELLWRF
FSDKVLKKRRRPGFDIAKNVLDLIYGQTLAWLGVLFTPLLPAMQILKLLLLFYIKMSSVM
MNCQAPRRPYRVTQMTTIFISLLCFPSFIGAAVCVTYTMWSTKPSVSCGPFRGLNKMIQA
GKIWMKQLEEENPNLSVLARAYAYLVENPLFLFMGAGIFLIVIYFHSEVVDGERKIINIL
QEQIENEGEDKKFLITELQSVHEQKRISRKRVAHQNSGC
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaatgtgaactttgacctgaacctgattcagatggaggctggaattgagagc
ccaacagacgaggaaggggttcatgacgcgttcagccagctgattgcagaacagagtctg
aatgaagacccaagtcttttcatagagttgcgggaagaggacgaggacgacttggacaat
gtggcaaatctgtccaatgcacggcatcgtttgggggaagaggggatgaatcacgacgac
gacggtggctgttacctgggacgtggtcaacaaccaactgattcccttatcaaggaacgc
tggtcctcagacaccttgaaggtcctttcctccatgcctagccgcaccattggtcgcagc
aggggagccattatttctcagtactacaacaaaacaatgaagctccggagagaccggcag
agcagaccagctgtccgagacttctcccgctcggccagacccagcatccgatgccatggc
atggaggcagacaccccagactcgtgggacatggaagaaacaaagagagaacgcctggtg
aacaacctgcagaacctgtcggtgggtgacagggagaggatgatcagagggatgccgctg
agtttaaaagagaaaggtgacctgaggaagttagcgttacaaaaagataaacacacacat
tccagcagcaagcttcactgttgcagtcagcagaaatattacatcatcatagccctgagg
cacagctggtacagctgcttgtccttcctgcactctctccatctgtggcaaatgccgctg
aagagagtgagcagccgttttggtactggagtcctctcctacttcttgttcctcaagact
ctcttcctttttaacatcttcctggtgctgattacgggtgtgttcttggtgataccccag
gcgttgcacccccccacaccacctgccaattggagctccttctctggactggagctcctc
accggggcgggttatttttctgactcactgatgtactatgggtactacagtaactacacg
ctccataggaacggcagcagctccagccgtctggacctttcttacaacatgccactggcg
tacttcttcaccataggaatggccttcttcatcacttgtatgatcctggtgtacagcatg
tcaaagtcgtttggtcagagcttcatgatcgacaagtctcacagcatcttggccattaaa
gctttttcttcctgggacttcaaggtcatcaaggagagctccgttaaactcatgtctgag
aacatctgcacgcagctcaaggagctgttagcagaggtgaaccaaaacaacgtttcaagc
acggcgttacagaagtgtgggaggttgatggttcacggcctggcatggacgatctgcacc
gctggcactgcaggctgcgcgatgagcatttacttgttttctgattacatgcacaaccaa
agcagagctggaaccggagcccagggccgcctgcagaaggaggccagccttttggcgctg
cctgtgctcgtctccctcatcaacctgctgcttcccggtctcttcaacctggcgtcctgg
tttgagaactatcactctccgtctgtgcgcacatatgtgtccatcagccggaacttgttg
tccaaagtgagcgtgctctgtgtcctgtgttaccattggttaggtcgaattgctacggac
tctatggatcacattaagtgctgggagagttacgtcggccaggagctctatcgcttcctc
atcatcgacttcatcttcactctgctggacaccttgtgtggggagttgctttggaggttt
ttttctgacaaagttctgaagaagaggagaagaccagggtttgacatcgccaagaacgtc
ctggatctcatctacggacagacactagcctggttgggcgttctcttcactccgctcctt
cctgcaatgcagattctcaaactgttgctgctcttttacattaaaatgagcagcgtgatg
atgaattgtcaggctcccaggagaccgtacagagtcacccagatgaccaccatcttcatc
tccctcctctgcttcccctccttcatcggcgctgcagtgtgtgtcacctacaccatgtgg
agtacaaaaccatccgtctcatgtgggccgttccgcggactcaacaagatgatccaagca
ggaaaaatctggatgaaacaactggaagaagaaaatcccaacctgtccgtcctggccagg
gcgtacgcctacctggtggaaaaccctctcttcctgtttatgggagcaggcatctttctg
atcgtgatctacttccacagtgaagttgttgatggtgaaaggaagatcatcaatattctg
caggagcagatagaaaatgagggagaagataaaaagttcttaatcactgagcttcagtct
gttcacgagcagaaacgaatctctagaaagagagtcgcccatcagaactctgggtgttaa
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