Nothobranchius furzeri (turquoise killifish): 107392302
Help
Entry
107392302 CDS
T05163
Symbol
hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04137
Mitophagy - animal
nfu04140
Autophagy - animal
nfu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107392302 (hif1a)
04137 Mitophagy - animal
107392302 (hif1a)
04148 Efferocytosis
107392302 (hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107392302 (hif1a)
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107392302 (hif1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
107392302
NCBI-ProteinID:
XP_015825519
UniProt:
A0A8C6NZ22
LinkDB
All DBs
Position
sgr16:complement(31179278..31192469)
Genome browser
AA seq
748 aa
AA seq
DB search
MDTGIVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAKQLPLPHSTSSSLDKASIMR
LTISYLRMRNLLCSDKPMEEGETELDVQLNGSYLKALEGFLMVLSEDGDMIYLSENVSKC
LGLAQFDLTGHSVFDFTHPCDQEELREMLLCRTGSKKSKEPNNERNFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHMCVHDHRAEQMEPLLPYLVLICDPIPHPSNIEVPLDTKTFLSR
HTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHHLFAKGQVTTGQY
RMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEDKLILSLGQTEDMKPVKE
EEQEEEELVVETTQLIPVKAEKTPELDVIKLFTEIVEPRSVGSLYEKLKDNSEALTLLAP
AAGDTFISLDFSSPGKESDTDLLEVPLYNDVMLPSTSDKLTLPLSPCESFAVPNTSSEET
KSKDFAPTPSTTPPLGPSEAGGSFGLPFSVGSDLNSDFKLDLVEKLLDPESKTLFNTQPM
EDFDLEMLAPYIPMDDDFQLNCLIPEEPLTCRPVKPVENPPVPVTKENHSYSSSMFSCNT
APPTPPVSTSPLATIIVNSAPKSEKAVSIRNLEAQNTQRKRKLSELKELIELGTLPSEQL
EKVKKQKVTDLGGAQAVLKVTDQGGAQAVLLLPSDLACRLLGTTSEGTGSLFTLPQLTRD
DCEVNAPLQGRQYLLQGEELLRALDHVI
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtacccgaaaagaaaagggtgagctcggagcgcaggaaggagaaa
tcaagggatgcagcaagatgccgccgtgggaaggagtcggaggtgttctatgagctggcc
aagcagctgcctctcccccacagcaccagctcaagcctggacaaggcctccatcatgagg
ctgaccatcagctacctgcgcatgaggaaccttctctgcagtgataagccaatggaagag
ggggaaactgagcttgatgttcagctgaacgggtcctacctgaaggcgttggagggcttc
ctcatggtgctgtctgaagacggcgatatgatttatctctcggagaatgtcagcaagtgt
cttgggctggcgcagtttgacctgactggccacagtgtgtttgacttcacacatccctgc
gaccaggaggagctgagagagatgctcctctgtagaacaggctccaaaaaaagcaaggaa
ccaaataatgaacggaatttctttctgaggatgaaatgcaccctcacaagcagaggtcgc
acggttaatgtcaagtcggctacatggaaggtccttcactgctcgggtcacatgtgtgtt
catgaccatcgagcagagcagatggagccactgctcccctacctggttctgatctgtgac
cccatcccccacccttccaacatcgaggtccctctggacaccaagacgttcctcagccgc
cacaccatggacatgaagttcacatattgtgatgagaggatcactgagctgatgggatac
gatccagaagacctgctgaatcgttctgtgtacgagtactatcacgctctggactctgac
cacctcacaaagactcaccaccacttgtttgcgaagggccaggtcaccacaggtcagtac
cggatgttggccaaaagaggaggctttgtctgggtggaaacgcaggccaccgttatctac
aacaacaagaactcacagccacagtgtgtcgtctgtgtcaactttgtcctcagtgggatc
caagaggacaaactaatcctgtctttggggcagactgaggacatgaagccagtgaaggag
gaagagcaggaggaagaggagctcgtagttgagaccacgcagcttatcccggtgaaggca
gagaagactccagagctcgatgtgatcaagctgttcacagagattgtagagcccaggtcg
gtgggcagcctgtatgaaaagctaaaggataactctgaggccctcaccctgctggctcca
gcagctggagacaccttcatctccctggactttagcagtcctggtaaagaatcagatacc
gacctgttggaggttcctctgtacaacgacgtgatgctgccctccacgagcgacaagctg
actctgcctctgtcgccctgcgagtcttttgctgtccccaacacgtcctctgaggagaca
aagtccaaagactttgctccgaccccgtccacaacaccccccctcgggccttcagaggca
ggcgggtcttttggccttcctttctccgtgggttcagacttgaactcagatttcaaactg
gacctggtggagaagcttttagacccagagtctaaaaccctgtttaacacacagccaatg
gaggactttgatctggagatgttggcgccctacattcccatggacgacgacttccagttg
aactgcctcatcccagaggagcctctaacctgtagaccagtcaaaccagttgagaacccc
ccagttcccgtgacaaaggaaaaccacagctactccagctccatgttcagctgcaacaca
gcccccccaacaccacctgtcagcacatcccctctagccaccatcattgtgaatagcgct
ccaaagtcggagaaggctgtgtccatcaggaatttggaagctcagaacactcagcgtaaa
agaaaactgagcgagctcaaagagcttattgaactgggaactttgccttcagaacaactg
gaaaaggtcaaaaaacagaaggtgacggatctgggaggggctcaggccgtgctgaaggtg
acggatcagggaggggctcaggctgtacttctgctgccttcagatttggcgtgccggctg
cttggcaccacatcagagggcaccggttctctcttcaccttgccacagctcacgagggac
gactgcgaggtgaacgcacccctacagggtcgtcagtacctgctacagggggaggagctg
ctgcgtgctctggaccatgtcatctga
DBGET
integrated database retrieval system
