Nothobranchius furzeri (turquoise killifish): 107392317
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Entry
107392317 CDS
T05163
Symbol
rtn1
Name
(RefSeq) reticulon-1 isoform X1
KO
K20721
reticulon-1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107392317 (rtn1)
03036 Chromosome and associated proteins [BR:
nfu03036
]
107392317 (rtn1)
Membrane trafficking [BR:
nfu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
107392317 (rtn1)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107392317 (rtn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
DUF4736
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
107392317
NCBI-ProteinID:
XP_015825542
UniProt:
A0A1A8AN96
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All DBs
Position
sgr16:31415604..31439899
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AA seq
712 aa
AA seq
DB search
MSAQPGEELGSDGKWFGDERNGLFGNAPPRFGEEFKPRGNDAAGDLDKQFHLYQDDGKRP
PVAMETASTDDPMSGLFRKPLSDDGDVYTSLLSNQSFTNSREASYLSDDLKPSSCSSGSS
GLDHFSSDAYSFNSKSKMTSNLSDDTPKSLLSSDKTESYNYMDISHGEERQVAPPSIFDK
GSGDHDLLGSYMDNNPGIDEDDEEEKENLGPALGSHSFPYVEDPSDEELTDYRSYRNLGG
TPQMASPVKITLTESKLPGSKTMPEQLPAPACMSERENVLSVGQQGVPTVTLSEPEDDSP
SSTPNASPTRKGFSSQDMFKTESGKPAASKSTKSNNCDPDGSSAESGDSEIELVSEEPPK
PSSNPFAEPPKSKGTFSQANNPFDNPPIAKGGFGLSGGPALPTAYSILREEREAELDSDL
IIESASEESPKREQGVTSLPTAIPPSNTSEAVPFQPLVAEKVKNPVKTEEDRFSKPKPPT
AAVPPEVRSEKPHQDDTHKPTNEGKGGLEKPAVSFFLEGFNKEKAIDLLYWRNVKQSGAV
FSSVLLLLFSLTQFSVVSVGAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAYLEME
IALSQDQISKYADKILLCSNTCMKELRRLFLVQDLIDSLKFAVLMWLLTYVGALFNGLTL
LILAVVSMFTLPVVYEKHQAQIDQYVGLIRTQVNSVMGKIQAKIPGAKRKEE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctcagcccggtgaggagctcggctcggatgggaagtggttcggagacgagagg
aacggcctctttgggaacgcgccgcctcggttcggtgaggaattcaagccgagaggcaac
gacgcggcgggcgacctggataaacaatttcatctttaccaggacgacgggaaaaggcct
cccgttgctatggaaactgcatctacagatgatcccatgtctggcctgtttaggaagcct
ctgagtgatgatggcgatgtgtatacctccctgctgtccaatcagagcttcacaaacagc
cgggaagcttcttacctgtcagacgacctgaagccctccagctgctcctctggctcttct
ggcctggatcacttctcaagtgatgcctacagcttcaactctaaaagcaagatgacttcc
aacttatcagatgacacacctaagtctctgctgagctcggacaagacagaatcctacaac
tacatggatatcagccacggggaagagcgtcaggtggcccctcccagtatttttgacaaa
ggctcaggtgatcatgatttactggggagctacatggataataaccctggcatagatgag
gacgatgaggaggaaaaggaaaacctaggcccagcacttggctctcactcgttcccttat
gtggaggatccatctgatgaggagctgacagattaccgctcctaccggaacctgggcggg
accccgcagatggccagcccagtgaagatcactctgaccgagtctaagcttccaggatcc
aagaccatgccggagcagcttcctgctccagcctgcatgtctgagcgtgaaaacgtcctg
agcgtgggccagcagggggttcccacggtgactctttcagagccagaggatgacagtccc
tcttccactccgaatgcttctccgacacgtaaaggtttctcttctcaagacatgttcaag
actgagtcagggaagcctgcagcttctaaaagcaccaagtccaacaactgtgaccctgac
ggcagcagcgccgagtctggagactcagagatcgagcttgtatctgaggagcctcccaaa
cccagcagtaacccatttgctgagcctcctaaaagcaagggcactttcagccaggctaac
aacccctttgacaatcccccgatagccaagggtggctttggtctctctggtggccccgct
ctacccacagcctacagcatcctgagggaggagagagaggcagagctcgacagtgacctc
atcattgagtctgcatctgaagaaagcccaaagagagagcagggagtcacctctctcccc
accgccatccctcccagcaatacctctgaggcggtgccattccaacctctggttgctgaa
aaggtcaagaaccctgtgaaaacagaggaggatcgtttcagcaagcctaagcccccgact
gctgctgtgcctccggaggtgagatcagaaaaaccccaccaggatgacacgcataaacca
accaacgagggcaaaggaggtcttgagaagcccgctgtatcgttctttttggagggcttc
aacaaagaaaaagcgattgacctcctgtactggaggaacgtgaagcagtcgggcgccgtg
ttcagcagcgtgctcctgctcctgttctctctgacccagttcagcgtggtcagtgtggga
gcgtacttggccctggcggccctctcagccaccatcagcttcaggatctacaagtccgtg
ctgcaggctgtgcagaagactgatgagggacacccattcaaagcttatctggagatggag
atcgctctgtctcaggaccagattagtaaatacgcagacaaaatcctgctgtgcagcaac
acctgcatgaaggagctccgccggctgttccttgtacaagacctgattgactccttgaag
tttgcagttctgatgtggctgctgacctacgtgggtgctctcttcaacggcctgacactg
ctcatcctagctgtggtctccatgttcaccctgcctgtggtttatgagaaacatcaggca
caaattgatcaatacgtgggactaatacggacccaggtcaactccgtgatggggaagatc
caggcaaagatccccggggccaagaggaaggaggagtag
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