Nothobranchius furzeri (turquoise killifish): 107392381
Help
Entry
107392381 CDS
T05163
Symbol
atg2b
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04136
Autophagy - other
nfu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107392381 (atg2b)
04136 Autophagy - other
107392381 (atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107392381 (atg2b)
03029 Mitochondrial biogenesis [BR:
nfu03029
]
107392381 (atg2b)
Membrane trafficking [BR:
nfu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
107392381 (atg2b)
Mitochondrial biogenesis [BR:
nfu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107392381 (atg2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
DUF7278
Motif
Other DBs
NCBI-GeneID:
107392381
NCBI-ProteinID:
XP_015825634
UniProt:
A0A1A8U2L1
LinkDB
All DBs
Position
sgr16:complement(32721949..32737968)
Genome browser
AA seq
2067 aa
AA seq
DB search
MPWPFSESIKKRACRYLLHRYLGNFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWSLNELL
ETSDAPFEVITGFIQTISLTVPWAALLQENCALEVKGLEMVLRPRPRAASGVEPMYWSSF
MTSSMQLAKECLSQKLTDDMGESFQPFEGLEKFAETIETVLRRVKVTFLDTVLRVEHVPE
NSKTGFVLEVRISRIVYCDETGEESPSVNVHQPTSFAHKKMQMEGITVFWDEFSDASHGC
RSSPTPSETEPKLSPSWNPKIICEPHPQFMEPPSSSAPFEPVQVGSLSGKIELSLTLKNN
LALSGAKLDVVGHIDMLLVLLSPRQVHLLLDMFGAFSGRGAQDWSKDRKSRPIQQEDEYR
LHLELNRCLKKDTAVADADLFDSQTTRTVSSRDDVFFSMADMDMSHSLSSLPPLGEPPTV
DLDLSLNSNYSASPGESPSANTTAVWEDYMDVPRQRVKQTSEAPVQSRDHLPQMLLRQTS
HPSKTHGDESRPELVLRLSLSCFALSVLHIDPLPPPHAAPSPFGPISVHFFSWEGPGQLS
PDSFLQSRTVFDQACPHDHLRFVGQSLTINYSHCQGSNLRTFKTDISLNQMEFVECLFPS
EAPIGRSQPGIQYTELLTFDAPTGTDAPLPICLHLLYKLAERRGPQGGQVRLSTIPRKAD
IQVELGPVRSELDISIVDRLNSLLQPQKLATTEMMASHMYTSYNKHFSLHKAFAEVFLDD
THTPSNCHISLTINAPLLGVAVRFPIPDLRSDQERGPWFKKSLQKEILHLELEKMELKTE
FMGGSSPGQTKMELTFKELTGKFQEEADQPAAYFLRVSHNMEGDMMTSESVKFDWPRVVL
KMNPTAVHSILERVTAEDDEGAEDHSLEEEEEEGAAHSLKDVCDFGKPEPSPFSSRRVMY
ENEEMVIPGDVAEMTEFQEKTMNTSRFVLELCFPNVQLTLPSKAFYEKLHNRINNDLLLW
EPTAPSPVETVESMPYGVGLSVASQLINTYSKDSFSQFRSTGPDEDSSGSEEENMLYYSP
SSDLGFRSRKKKKPKTHSKTSQSLFSVILSVSHGLVSLQTNAKGEDKTVLKNKYGEFWLE
VKNGVLFSVAQYEGYKDQHYICFHTSSVCMYHQGLLERGGSAADISLPCRTHPHWLEPTI
YQSETSPEKSSTPSEGIGLEARSMVSVAVKISSQSPECNIKEFLVAVGVRGATLQHRVVP
PNLGWYEQIVDFLNVSDEPVLGYAPPMSVTTLHLHLWSCSLDYRPLYLPLRSVVVVETFS
ISSSVSLDNLSSTLRIILDEAALFLSDKNNAVSVNLVRDYVQVVDMGTLELRITAVKPGA
DGKLSEPRFELRCSSDAIHIRTCSDSCAALMNLIQYVASYGDLLPPEEPEATHKSKTEAS
SRPTSQTPLLAETEQQMLQDLMSEAMEEMDGQLAPGPQQNGSHEEPILDLDPPRSDLFLF
PDESGNITQDSSPTYPVLPSPLITPAPNLAQEMDDFCILESPGSKGEDRDQEPVVKRLTS
DPVEIKDDHFSQPLEGSDSSRGAVNFPIPEVRYLIKEISIIWHLYGGKDFGSIACTASPA
RSRGSTLHSSPSHTPVRQVKTLGRAGGGRGRNPDVLMEIQLSKVRFQHEVYPHPTLASRP
TVDQPVSRQVFIVQDLEIRDRLATSQMNKFLYLYSSKEMPRKAHSNMLTVKALHTCPESG
QAPPECCLRVSLMPLRLNIDQDALFFLKDFFSSLATEVEFFSPPAQDAVCVSTKKAAAPE
ISCSFTKHTPGSQDPAPIISLPAQRHTSLNGFTTSATEEVNDSDASACLFTDQPIFFREF
RFTSDVPIRLDYHGKHVTMDQGTFAGIIFGLTQLNCSELKLRQLCYRQGLLGMDKLFSYA
INEWLNDIKTNQLQGLLSGVTPIHTLVKLVHGLRDLVWLPIEQYRKDGRIVRGFQRGTAS
FGTSTAMAALELTNRMVRTVQAAAETAYDMVSPVPDERDAKRVIRYSHYGLAHQPVDLRE
GVAKAYTVVKEGITDTALTIYDTATREHEQRGMTGAVGGVLRQLPPAVVKPLIMATEATS
NVLGGMRNQIHPDARQEESQKWRHGEE
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgccttggccgttttcggaatcgatcaagaaacgggcttgtaggtacctcctgcaccgg
tacctaggaaacttcctgcaggaaaaactgagcttggaacaactcagtcttgatctttat
caaggcactgggtctcttgcgcaagttcctttggacaaatggtcccttaatgagctgctg
gagacctcagatgctccttttgaagtcatcacaggcttcatccagacaatttctctgacc
gtcccatgggcagcactgctgcaagaaaactgtgccctagaggtcaaaggtttggagatg
gtgctcagaccaagaccaagagcagcatctggtgttgagcccatgtactggtctagtttc
atgaccagcagcatgcagctcgccaaggagtgtctcagtcagaagctcaccgatgatatg
ggggaaagctttcagccgtttgagggattagaaaagttcgcagagacaatagaaactgtt
ctgagaagagtcaaagtgacatttttggacacggttctcagagtcgaacacgttccagaa
aactctaaaaccggatttgttcttgaggttcgaatcagcaggattgtgtactgcgatgaa
acgggtgaagagagtccgagtgttaacgtgcatcagccgacctccttcgcacataaaaag
atgcaaatggaaggaatcactgtattctgggacgagttttctgacgcttcacatggttgc
agatcctcacccactccttcggaaactgaaccaaaactctcaccgagctggaatccaaaa
ataatatgtgagccccaccctcagtttatggagcctccgtcctcctcagctccctttgag
cctgtgcaggttgggagtctcagtggtaaaatcgagttgtctctaactctgaaaaacaac
cttgctctgtctggagcaaagctggatgtcgtcggacacatcgatatgctacttgtcctt
ctgtccccacggcaagttcacctcctcttggacatgtttggagctttctctggcagaggt
gcacaggattggagtaaagaccgaaaaagtcgtcccatccagcaggaggatgagtatcgt
ctccatttggagctgaaccggtgtctgaagaaggacactgctgttgcagacgctgacctt
tttgacagtcagaccaccagaacagtgtcaagtcgagatgatgtgttcttctccatggcg
gacatggacatgtctcacagtttatcatccctccctcctctgggtgaaccacccaccgtg
gacctggacttgtcactgaacagtaactactccgcttctccaggagagtctccttctgca
aacacaacagctgtgtgggaagattacatggatgtgccgcgtcaacgagtgaagcagact
agtgaagctccagtccaatcccgggatcacctccctcagatgctgttgagacaaacctct
catccatctaaaacccacggggacgagtcaaggccagagttggtgttgaggttgtctctg
agctgctttgctctttctgtgcttcatatcgacccactgccacctccacatgctgctcca
agccccttcggaccaatatctgtacatttctttagctgggagggcccaggccagctttct
ccagattccttccttcagtctcggacagtgtttgatcaagcatgcccccacgatcatctc
aggtttgttggtcagagtctgacgataaactacagtcactgtcagggatccaacctgcgg
acgttcaagaccgacatctccctgaatcagatggagtttgtggagtgtttgttcccttct
gaagcacccattggtagatcccagccagggatccagtacacagaactcttgacatttgac
gccccgaccggcactgatgcaccacttcccatctgccttcacctgctttacaagctggct
gagcgtagaggccctcagggcggtcaggtgcgtctaagcacaattccaaggaaggcggat
atccaggtggagctgggaccggtgcgctcagagctggacatcagcatcgtggatcgtctc
aactcactgctgcagcctcagaagttagctaccacagagatgatggcctctcacatgtac
acgtcctacaacaaacacttcagcttgcacaaagcctttgcagaggttttcttggacgac
acccacacgcctagtaactgccacatatcgctgaccattaacgcccctttgctgggtgtt
gccgtgcgcttccccatccccgacctgcgttcagatcaggagagaggtccttggttcaag
aagtccctccagaaagaaatcctccatctggagctggaaaaaatggaattaaaaaccgag
ttcatgggtggcagctcacccggccaaaccaaaatggagctcacgtttaaggagcttact
gggaagttccaggaggaggcagaccaaccggccgcatatttcctcagagtgtctcacaac
atggaaggagacatgatgacatccgaaagtgtgaagttcgactggccgagggttgtgctg
aagatgaatcccacggcggtccattccatcctggaacgcgtgacggctgaggacgacgag
ggtgctgaggaccactctctagaggaggaagaagaggaaggagcggctcactcactgaag
gatgtgtgtgacttcgggaagccagagccgtcccccttttcttctcgtagggttatgtat
gaaaacgaagagatggtcattcctggtgatgttgctgagatgacagaattccaggagaaa
accatgaacacctctcggtttgtccttgagctttgcttccctaacgtgcagctaacgctc
cccagcaaagctttctatgaaaaactacacaacaggataaacaatgacctgttgctgtgg
gagcccaccgctccgtctccagtggagaccgtagagagcatgccttatggcgtcggactc
tccgtggccagtcagctgatcaacacttactccaaagacagttttagtcagtttcgctct
actggtcctgatgaggacagcagtggctctgaggaggagaatatgctctactactcacca
tcttctgacctgggcttcagatcccgaaagaagaaaaaacccaaaacccacagtaaaact
tctcagagtcttttttccgtcatcctgagtgttagtcatggtctggtgtctctccagaca
aatgccaagggcgaggataaaaccgtcctcaaaaacaaatacggcgagttctggctagag
gtgaagaatggtgttctgttcagcgtcgcccagtacgaaggctacaaagatcagcactac
atctgcttccacaccagcagcgtgtgcatgtaccatcaaggactcctagaaagaggcggc
tctgcggcagacatcagtttgccatgcagaacacatccacactggctggagccaaccatc
taccaatcagagacgtctcctgagaagtcttcaacaccctcagagggcatcggtctggaa
gctcgcagcatggtctcagtcgctgtcaaaatctcatcacagagcccagagtgcaacatc
aaggagtttttggttgctgtcggagtgagaggagccacgctgcagcaccgtgtcgtccct
cccaacctgggctggtatgaacagattgtcgactttctgaatgtttctgatgaacccgtg
ttgggttacgcccctcccatgtctgtcaccactctacatttacacctgtggagctgctcg
ttagactacagacccctttacctgcccctcagatcggtggtggttgttgaaactttcagc
atctccagcagcgtctctttagacaatttgtcgtcaacgttgaggatcattttggatgaa
gctgctctgttcctctcagacaagaataacgctgtttctgttaatctagtgcgagactat
gttcaggtggtggatatgggaacgctggagctgaggattacagctgtcaaacctggagca
gatggaaagttgtcggagcccagattcgagctgcgctgctccagtgatgcgattcacatc
cggacttgttcggactcctgcgccgctcttatgaacctgatccagtacgtggctagctat
ggagacctgctgcccccagaggagccagaggccacacataaaagcaagacggaggcttcc
agcagaccaacatctcagactcctctgctggctgaaacggagcagcagatgctgcaggac
ctgatgagtgaagctatggaggagatggatgggcagctggcaccaggaccacaacaaaac
ggttcccacgaggagccgattcttgacctagatccacctcgctcagacctgttcctgttc
cctgatgagagtgggaatattacccaggattcaagccccacctaccccgtgcttccatct
cccctcatcacacctgctcctaacctggcccaagagatggatgacttctgtattctggaa
tctcctggctccaaaggggaggaccgggatcaggagcctgtggtgaaacgacttacctcg
gatccagtggaaatcaaagacgatcacttcagtcagcctctggaagggagcgattccagt
cgtggagctgtgaattttcccatcccggaggttcgctacctcattaaagagatttccatc
atctggcatctttatggaggaaaagactttgggagcatagcttgcacagcgtctcccgcc
agaagcaggggatctactcttcatagctccccatctcacaccccagtcaggcaagtgaag
acgctggggcgggcaggaggaggaagaggaaggaaccctgatgttttaatggaaattcaa
ctcagcaaggtgaggtttcagcacgaggtgtacccacaccccactctggcatcacgtcca
acagtggaccagccagtgtcccggcaggtgtttatcgtacaagacctggagatccgggac
agactcgctacctcacagatgaacaagtttctctatttgtactccagcaaggaaatgccc
agaaaagcccactctaacatgttgacagttaaggctttacacacgtgtcccgagtcaggc
caggctcctcccgagtgctgcttacgagtctcccttatgcctcttcgcctcaatatagat
caggatgcattattcttcctgaaagacttcttcagcagtctcgccactgaagtagagttt
ttctcaccgcctgctcaagatgctgtttgcgttagcacaaagaaagcagcggctccagag
atctcctgcagcttcactaagcacactcctggcagccaggatccagccccaatcatttct
cttcctgctcagagacacacgagcctcaatggtttcaccacatctgccacagaagaagtg
aacgatagcgacgcctctgcttgtctctttacagatcagccaatcttctttagggagttt
cggtttacctctgacgttccaattcgtctggattaccatgggaaacatgtgacaatggac
cagggcacatttgcaggaatcatctttgggttgactcagctgaattgttcagaattgaaa
ctgaggcagttgtgctacagacaaggattgctgggcatggataagctcttttcctacgca
ataaacgagtggctaaatgacataaagaccaatcagcttcaaggacttctgagtggcgtg
acgcccattcacactctggtaaaactcgttcacggcctcagggacttggtctggctccct
attgagcagtacaggaaggatggtcggattgttcgggggtttcaacgcggcaccgcctcc
tttggaacttccacagccatggcggctctagagctcacaaacaggatggtccgcaccgtt
caggcagcagctgagacggcctacgacatggtgtctccagttcctgatgagagagacgca
aagagagtaatacgctactctcattatggtctggctcatcagcctgttgacctgagagaa
ggtgtagccaaagcctacactgttgtgaaagagggcatcacagacacagcgctgaccatc
tatgacacagcaacgcgggagcacgagcagcgtggaatgacaggagcagttggtggtgtt
ctccgccagctgccaccagcagtagtcaagccactcattatggccaccgaggcgacctct
aacgtcttgggtgggatgaggaaccagattcacccggatgcacggcaggaagagtcacag
aaatggaggcatggggaagagtaa
DBGET
integrated database retrieval system
