Nothobranchius furzeri (turquoise killifish): 107392424
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Entry
107392424 CDS
T05163
Symbol
exd1
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107392424 (exd1)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107392424 (exd1)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
SM-ATX
LSM
Vir_act_alpha_C
LSM14
Motif
Other DBs
NCBI-GeneID:
107392424
NCBI-ProteinID:
XP_015825709
UniProt:
A0A9D3BB87
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Position
sgr16:33402469..33408862
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AA seq
556 aa
AA seq
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MVVDDVEFMTLLKGKRIKLTLKGGSCFEGIIQRINPNKTLVLADVRISDGRRISGTKLFF
GREISNVEVADETRLDTGNIDLVESEEKLINVEKFQPYRKTFPFDDDDEEKFINFEVIDE
YHQKFGPAVMTIKKQRVIGVGGEGVEVHKSGRLCWLQIATKNKVYLFDILLLGARAFKNG
LSMILESKRILKVIHDCRALAGCLFAHFGVKLNNVFDTQVADVMCFYSETGGFLPDRVST
LQEVVSLHLKVPASGLSSLQKKSQLSQEAMEMWYKRPCSVPLLKVMAVSVIHLQPLRLVL
LDTLMHDYVALVDSYLTSSHFEPHGLEHVDMESVLVLPNELRRLLEQHRERHEQAAAHYP
VTEQGLLVRFKPYSHSDYQRSSAAEDYINDSFEPAAVELSPPRTDPLVNQQRSSCVPSVG
VHALCDSLDESPSSAAVSNQEKGKSAARPPSEFHIDVAGRGRPFVKEEATLPILPSLGRG
LLLQTLKECVGSLRSPNSLEVATKVANSTLTQEESPQPGGHDDDVLREMCGSGEQFPPTR
QCIRSSLIQSFHSFRY
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggttgtggacgacgtcgaatttatgactcttttaaaaggaaaacgcattaagctaacg
ctgaaggggggttcctgtttcgagggcatcatacaacgcatcaatcccaacaaaaccttg
gttttggcagatgttaggatcagcgatggacgcagaatttctggaaccaaactgttcttt
ggacgtgagatttcaaatgttgaagttgctgatgaaacaagacttgacacgggcaatatc
gatctggttgaatctgaggagaagcttatcaacgtggaaaagtttcagccatacaggaag
acgttcccatttgatgacgatgatgaagaaaagttcatcaatttcgaagttattgatgag
tatcaccagaaatttggtccagccgtaatgaccatcaaaaagcagcgtgtaattggtgtg
ggaggtgaaggggtggaggtgcacaagagtggacgattgtgctggttgcagatcgcaact
aaaaacaaggtgtacttgtttgatatcctgctacttggagcgcgtgcatttaaaaacggt
ctttctatgatcctggaaagtaaacgcatattaaaggtcatacatgactgcagagccctt
gctggatgtctctttgctcattttggagtaaaacttaacaacgtttttgacactcaggtg
gcagatgtgatgtgcttctactcagagacaggaggcttccttcctgaccgagtcagtact
ctccaggaggtggtaagtcttcatctgaaggttcctgcctcggggctctcatctcttcag
aagaagtcacagctcagtcaggaagcaatggagatgtggtacaagcggccatgctctgta
cccctgctgaaggtgatggctgtgtcagtgattcatctgcagccgctcagactggtgctg
ctagacacactcatgcatgactatgtggctctagtggattcttaccttaccagcagccac
tttgaaccccatggattggaacatgtcgacatggaaagtgtactggtcttgcccaacgag
ctcagacgactgcttgagcagcaccgtgaacggcatgagcaggctgctgctcactatcct
gtcacagaacaaggtctgcttgttcgcttcaaaccttattctcactcagactaccagaga
tcctctgctgcagaggattacatcaatgactcgtttgagcctgcggctgtggagctttca
ccaccacgtacggatcccctcgttaaccaacaaagatccagctgtgtgccttctgtgggt
gtccatgccttatgtgattctctggacgaatcaccatcctcggccgcagtgtccaaccag
gagaaaggaaagtctgcggctagacctccatctgagtttcatattgatgtggcaggaaga
ggaaggccgtttgtgaaagaggaggcaactttaccgatcttaccatccttgggacgaggt
ttacttcttcagacactcaaagagtgtgttggctccctcagaagtccgaatagtctggag
gtggctacaaaagttgcaaacagcactctgacccaagaagaaagcccacagcccggaggt
catgatgatgatgttttaagggagatgtgtggttcaggggaacaatttcccccaactcgc
cagtgcatcagatcctctctgatccagtcattccattctttcagatattaa
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