Nothobranchius furzeri (turquoise killifish): 107392523
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Entry
107392523 CDS
T05163
Symbol
syf2
Name
(RefSeq) pre-mRNA-splicing factor SYF2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107392523 (syf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107392523 (syf2)
Spliceosome [BR:
nfu03041
]
Complex B
Other components
Prp19-related factors
107392523 (syf2)
Complex C
107392523 (syf2)
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Gene cluster
GFIT
Motif
Pfam:
SYF2
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
107392523
NCBI-ProteinID:
XP_015825862
UniProt:
A0A1A8UHT1
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Position
sgr16:complement(36327987..36335042)
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AA seq
238 aa
AA seq
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MASCDEGTATATEAEPAETLASEKREARLRKFRELHFKRNEARKLNQQEVVEEDKRLKLP
ANWEAKKARLEWEIAESEKKKECAASGKDYDRVKLLEVTADEAERWERKKKKKNPDQGFA
GYAEAQFRQYQRLTKQIRPDLESYSKLRDESGEDFYPTTNSLIYGTHTPSKEGIDRMVED
VEKQIEKRAKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctgtgacgagggaaccgccacggctactgaagcagaaccggccgaaactttg
gcttccgagaagagagaagcgagacttcgtaaattcagagagttacatttcaaacggaac
gaagcacgaaagctgaatcagcaggaggttgtggaggaggataagagactgaaacttcct
gccaactgggaagctaaaaaagcccgactggagtgggaaattgctgagagtgaaaagaag
aaggaatgtgccgcctctggcaaggattatgacagagtgaagctactggaagtcacagct
gatgaggctgaacgatgggagaggaagaaaaagaagaagaatccagaccagggttttgca
ggttatgccgaggcccaattccgacagtaccagagactcaccaagcaaatcaggcctgac
ctggaaagctacagcaagctacgggatgaaagcggtgaggacttctaccccacaacgaat
agcctgatctatgggacccataccccatcaaaggagggcattgaccgcatggtggaagac
gtggagaaacagatcgagaagcgtgccaagtacagccggcgcagagcctacaacgacgac
gcagacatcgactacatcaacgagaggaatgccaagttcaacaagaaggcggagcgcttc
tatggcaaatacacagccgagatcaaacagaacttggagagaggaacggccgtctag
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