Nothobranchius furzeri (turquoise killifish): 107392625
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Entry
107392625 CDS
T05163
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu02010
ABC transporters
nfu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107392625
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107392625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfu02000
]
107392625
Transporters [BR:
nfu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107392625
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_23
Tmemb_40
DUF1424
Motif
Other DBs
NCBI-GeneID:
107392625
NCBI-ProteinID:
XP_015826007
UniProt:
A0A9D2XJ40
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Position
sgr17:complement(15177685..15194864)
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AA seq
1257 aa
AA seq
DB search
MGFFTQLYLLLWKNFTYRRRNKIQLIVELLWPLFLFLILISVRRSHPPYKQSQCHFPNKA
LPSVGTLPWIQGIICNINNPCFHSQTPGETPGQISNFDNSLLSRLFVDAQTLLSHDGHQS
LSTFQDLMGSVRLLGERLESFPTLPVKECLRPNETFSNFLLTSGNLSSSTVDLLMNAHLN
FQAVLTGFQTPLKVLVCNESLMAELLSVDGGAANMSVLHTELCGLPADVLQEAEGIFLSQ
LEFARFFTGNRLMGSTEELRGTSLAIASVSQELAVLIDDLSSFTSFAELSAALTLLSPKN
YAAEPRESLRAFSRIMCGHPEIGGKRIPSLNWYEDTNIQSFLGEDGTEEVNIDIDNNTTP
FCRNLIYSLESNPLSRIMWRGIKPLFKGKLLYTPDTPVTQRVMKELNRTFEDLQILQDLH
EAWKEVGPEIKNYMETSVEIRMLQDLLRRPEIAVLVNMRLENSTWTASQIAHFLSTPSPD
NPKKREAPPTWTDVYNDTENTIVTLAQITKCFNLDKLEGMDTEGQLINRALELLEDKKFW
AGVVFQLPNTSTSELPPHVAYKIRMDIDDVTRTNKLKDKFWDPGPSADPFNDMRYIRGGF
VYIQDLVERAVNYVLTGVKQTTGIYIQQMPYPCYVDDIFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVHEKEARLKETMRIMGLGTGTLWLSWFISSIVPFMVSASLLIGVLKWGDILPYS
NPAVVFFFLVAFATATIMQCFLISTFFSKANLSAACGGLIYFSLYLPYVLCVAWRDYLNS
THRILFSLLSPVAFGFGCEYFAQYEEQGVGIQWYNLRGSPVEGDKYNFFVSIIMLYVDAF
IYAVAAWYIEAVFPGEYGIPRPWYFIFQLNYWGGVPLEAGMPIPPAPTDQDEDHIEPDPN
SLNLGVNIRNLVKIYKKGGKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYIKGMDIRYDMDIIRKTLGVCPQHNVLFDMLTVEEHVWFYGCLKGLSEETVKAELG
ILLQDVGLLHKRHDLTKNLSGGMQRKLSVAIAFIGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAEMLGDRIAIISKGKLCCCGSPLFLKSRLGSGYYLTVVKRE
GMSSSNPSNSSLSTNTSKQPSFVKDSESSLSEDTGLGSEDSSTDLAALLALVQQHIPGAR
LVEESRREAVINLPQTAAKDGSLAIFLSKLDQKLPDLGLLSYGLSDSTLEEVRHEAN
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggggtttttcacgcagctctacctcctgctctggaaaaatttcacataccgcagacgc
aacaagatccagctgatcgtcgagcttctctggccgctcttcctctttttaattctcatc
tctgtccgtcggtcgcaccctccgtacaaacaaagccaatgtcattttccaaacaaagcc
ttgccgtcagtaggcaccttaccctggattcagggcatcatctgcaacatcaacaacccc
tgtttccacagccaaacaccaggagaaacacccggacaaattagcaactttgacaactca
ttactgtctcgtctctttgtggatgcccagactcttctgtcccacgatggacaccagagt
ttgtccacctttcaggacctgatgggcagtgttcggcttctgggagaaaggcttgaatca
tttccaactctcccagttaaagagtgcctgagacccaatgagactttctccaactttctt
ctgaccagtggcaacctgtcgtcttcaaccgtggacctgctgatgaatgcacatctcaat
tttcaggctgtattgactggattccagacgccactgaaagtgttggtgtgcaacgagagc
ttgatggccgaactgctgtcggtggatggaggagcagccaacatgagtgttcttcatact
gagctgtgtggccttccagctgatgtcctgcaggaggctgagggcatttttttatcccaa
ctggagtttgccaggttcttcacgggaaaccgactgatgggtagcactgaagagctgaga
ggcacgagtctggctattgcttctgtgtcccaggaacttgctgttctcatagatgatctc
tcctccttcaccagttttgcagagctgagtgcagctcttactcttctttcccctaaaaat
tacgcagcagagcccagagaaagtttgagagctttttctaggatcatgtgcggtcaccct
gagatcggcggcaagcgcatcccatcgctcaactggtacgaagacaccaacatccagtcc
tttctcggcgaagatggcacagaggaggtgaacatcgacattgacaacaacacaacacca
ttctgtaggaatttgatctacagtcttgagtccaacccgctgtctcgcattatgtggcga
ggaatcaagccgctgtttaaaggaaagctcctgtacacaccagacactcctgtcacacaa
cgagtcatgaaagagctgaacaggacatttgaagacctgcagattcttcaggatctgcat
gaagcttggaaggaggtgggaccagagattaagaactacatggagaccagtgtggagatc
agaatgctgcaggatctgttgcggcgtcctgaaattgctgttctggttaatatgcgtttg
gaaaactcaacctggacagcttcacagatcgctcatttcctgtcaactccctcaccagac
aatccaaagaaacgcgaagctccgcctacatggacagacgtctacaacgacacagagaac
acaatcgtgactctcgcacaaattaccaagtgtttcaatctggacaaactggaagggatg
gatacggagggtcagctgatcaacagagcattggagctgctggaggacaagaagttttgg
gctggtgtggttttccagcttcccaacacgtccacatctgagctacctcctcatgtcgcc
tacaagatccgaatggacattgatgatgtgacccgaaccaacaagctgaaggacaagttt
tgggatccgggcccatctgcagacccgttcaacgacatgcgctacattcggggtggtttt
gtttatattcaggacttggtggagagagctgtgaactatgttctaactggagttaaacag
accactggtatctacatccagcaaatgccgtacccctgttatgtggatgatatttttctt
cgtgtcttgaaccgctccctacctctcttcatgaccctggcctggatctactcggtggcc
atgatcatcaaaggcgtggtgcacgagaaggaggcgaggctgaaggaaacaatgaggatt
atgggtctcggtacgggaacgctgtggctcagctggttcatcagcagcattgttcctttc
atggtgtctgcgtctcttcttattggtgtgctgaagtggggtgatatattaccatacagc
aacccagctgttgtcttcttcttcctcgtggcgtttgccacagccaccatcatgcagtgt
ttcctcatcagcaccttcttctccaaggccaacctgtctgctgcctgtggagggctcatc
tacttcagcttgtacctgccttatgtactgtgtgtcgcctggagagactatctcaattcc
acacacagaatattatttagtttgctgtcccctgtggcctttgggtttggctgtgagtac
tttgctcagtatgaggagcaaggagtgggaatccagtggtacaacctgcgaggcagcccc
gttgaaggagacaaatacaacttcttcgtctctataatcatgctttacgtggatgccttc
atctatgctgtagcagcctggtacatcgaagcagtttttcctggagaatatgggatccca
aggccctggtacttcatctttcaactcaactactggggcggagttcctcttgaagcaggg
atgccaatcccgccagcacccacagaccaagatgaagatcacattgaaccagatcccaat
agcttgaacttgggagtgaacatcagaaatttggtgaaaatctacaagaaaggagggaaa
ctcgctgtcaaccatcttaacctgaagttctacgagggacagatcacctcttttctcggc
cacaacggagccgggaaaaccaccaccatatccgtcctgactggtctcttcccgcctacc
tctgggactgtgtacatcaaaggcatggatatccgttatgacatggacatcatcaggaag
acgctgggggtgtgtccacagcacaatgtcctgtttgacatgctcacagtagaggagcat
gtgtggttttacgggtgtctgaagggcctgtctgaagaaaccgtgaaagctgaactcggc
attttgcttcaggatgtcggtctactacacaaacggcacgatctgaccaaaaacctctct
ggtggcatgcagagaaagctgtctgtggcgatagcgttcatcggaggctctaaagtggtg
gttctggatgaacccactgctggtgttgacccctactcccgcagagggatctgggatctc
ctgcttaagtaccgcaaagaccgaaccatcattctgtctactcactacatggacgaggcg
gagatgttaggggaccggattgccataatctccaaggggaagctgtgctgctgtggatcg
ccactcttcctgaaatctcggctgggatctggctactacctgactgtggtgaagagggaa
ggaatgagctccagcaatcccagtaattccagtctcagcaccaacactagcaagcagcct
tcttttgtaaaagacagcgagtcctctctgagtgaagacactggactgggaagtgaagac
agcagcaccgatctggcagctttgctcgctctggttcagcagcacatccctggtgcgagg
ttagtggaagagtcgagaagagaagcagtgatcaaccttccacagacagctgctaaagac
ggcagcctggcgatcttcctgtccaaactggaccagaagcttcctgacctgggcctcctc
agctacggcctgtcagacagcacactggaagaggtgagacacgaagctaactga
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