Nothobranchius furzeri (turquoise killifish): 107392648
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Entry
107392648 CDS
T05163
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03018
RNA degradation
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107392648 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
107392648 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107392648 (lsm7)
03041 Spliceosome [BR:
nfu03041
]
107392648 (lsm7)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107392648 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
107392648 (lsm7)
Spliceosome [BR:
nfu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107392648 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
InhA-like_MAM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
107392648
NCBI-ProteinID:
XP_015826025
UniProt:
A0A9D2XHF0
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Position
sgr17:22930770..22933052
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AA seq
103 aa
AA seq
DB search
MADKEKKKKESIFDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QLKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaaaagaaaaagaaggagagcatcttcgacttgtccaagtatatcgac
aagacgattcgggtgaagtttcaaggtggacgagaggcaagcggcgttttgaaaggattt
gatcctctgttgaacctggtgctggacggcacgatcgaatacatgcgtgatccagacgac
cagctgaagctgacagaagacacccgacagctggggctggtggtctgcagaggaacctct
gtggtgctgatctgtcctcaggatggcatggaggccattcctaacccattcatccagcag
caagatggataa
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integrated database retrieval system
