Nothobranchius furzeri (turquoise killifish): 107392654
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Entry
107392654 CDS
T05163
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M-like isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107392654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107392654
Spliceosome [BR:
nfu03041
]
Common components
Common spliceosomal components
hnRNP proteins
107392654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RBD_DEAH11
RRM_MARF1
HnRNP_M_NLS
DUF7552
Motif
Other DBs
NCBI-GeneID:
107392654
NCBI-ProteinID:
XP_015826031
LinkDB
All DBs
Position
sgr17:22646280..22654704
Genome browser
AA seq
757 aa
AA seq
DB search
MSNEQSENTTETETQPQQQGEMNGKSKLESNNSRKERPQKRGGGRFEPYANKRYRVFVSN
IPYDVKWQALKDLMKEKVGEVTYVEHLMDAEGKSRGCALVEFRTEELMKKAVEKVNKHSL
NGRPLKVKEDPDGIIAQREMSKSLGGGPLGGHAGVGGMGGMGGMDRMSGMDRIGGMGGMD
RIGGMGGMDRIGGMGGMDRIGGMGGMDRMGGMAGMGGMGGMGGMDRMGGMDRMGGMDRMG
GMDRMGGMDRMGPGPSGPMVNIPPSLMNNPNIPSEVIQGLQNGRIGSTIFVANLDYKVGW
KKLKEVFGMAGVVVRTDILEDKEGKSRGMGTVTFEMPIEAVQAVSMFNGQVLFNRTMHVK
LDEKSLPKEFGQPDRSAALPRGLSGVGLGLGPGGQPIDTQMLNRGSGGMGNVGPGGMDGM
GFNNMGGRMGGGGGGGAGMDNFGGMNSMDRFGSSGMGRVNDMDRGVGGAFDRDFGRNEMG
MSRNNFGDSFDRGMGNTLGMDRMNTGGDRLGGNIGGMDRMGADRIDRGSDLDRLGSGFDR
AGSGMDRLGPTMDRLGPGVDRMGSNMDRLGPGGFDRLGPSNLDRISTSMDFGSQMSMDRM
GNTGLDRMGSSFDRMASSGGLDRFPSGGLDRMGSAMDRIGSGGVGGQFDRSGDLDRGFGG
NSFGGAGGPGIGGGNIRKGCQIFVRNLPFDFTWKMLKDTFNTCGMVQYADIKMENGKSKG
CGVVRFDNPETAERACRTMNGYRLNGREIDVRIDRNA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgagcagtcagaaaatacaaccgagacggaaacccagccccagcagcaggga
gaaatgaatggaaaatccaagttggagtccaataacagcaggaaagagagaccccagaag
agaggtggaggtcgcttcgaaccttatgcaaacaagagatacagagtgtttgtcagtaac
atcccttatgatgtgaaatggcaagccctgaaagacctgatgaaagaaaaagtgggtgag
gtaacatacgtggaacacttaatggacgcagaaggcaaatcgaggggttgtgctcttgtt
gagtttaggactgaagagctgatgaaaaaagctgtggaaaaggtcaacaagcattccctc
aatgggcggcccctcaaagtgaaagaggaccctgatggcatcattgcccagagagaaatg
agcaagtctcttggtggaggtcccctaggaggccatgctggagtgggaggaatgggtggc
atgggtggaatggatcggatgagtggaatggatcgcattggtggcatgggcggaatggat
cgcattggtggcatgggcggaatggatcgcattggtggcatgggcggaatggatcgcatt
ggtggcatgggcggaatggatcggatgggtggcatggcgggaatgggtggcatgggcgga
atgggaggaatggatcggatgggtggaatggatcggatgggtggaatggatcggatgggc
ggaatggatcggatgggcggaatggatcgcatgggcccaggaccatctggccctatggtc
aacatcccccccagcttgatgaataacccaaacatccctagtgaggtcattcagggtctc
caaaatggcagaattggaagcaccatctttgtggcaaatcttgattacaaagtggggtgg
aaaaaactgaaggaggtattcggcatggcgggtgtggttgtaaggacggacattctggaa
gacaaggaggggaaaagcagaggcatgggcacagtaacatttgaaatgcccattgaagca
gttcaagctgtctctatgttcaacgggcaggtcctattcaacagaaccatgcatgtcaag
ctggatgagaagtccctccccaaagagtttggacaaccagatagatctgctgctcttccc
cgaggtctaagtggtgttggtttgggacttggaccgggtggtcagcctattgacacacaa
atgctcaataggggaagtggagggatgggaaacgtgggcccaggaggaatggatggaatg
ggatttaacaacatgggaggtcgaatgggaggcggaggaggtggaggagctggtatggat
aactttggcggaatgaacagcatggatcgttttggctcttctgggatgggacgggtaaat
gatatggaccgtggggttggtggtgcttttgacagagactttgggcgaaatgaaatggga
atgtctcgcaataattttggagattcgtttgatagaggaatgggaaatacccttgggatg
gatcgaatgaacactggaggggatcgcctaggaggcaacattggaggaatggaccgtatg
ggtgcggacaggattgatcgtgggtctgacctggacaggctgggatctgggtttgatcgt
gctggctctggcatggaccggcttgggcccaccatggacaggcttggaccaggtgtagac
cgcatgggttctaacatggatcgccttggtcctggtgggtttgatcgtctgggcccatct
aatttggatcgtataagtaccagcatggactttggctcccagatgagcatggatcgcatg
ggcaacactggacttgacagaatggggagcagctttgatcgcatggcgtcttctggagga
cttgaccgctttccttctggtggccttgaccgcatgggctctgccatggaccggatcgga
tctggaggtgttggtgggcagtttgatcgctccggtgatttagatcgtggatttggtggg
aattcctttggaggagctggaggacctggaatcgggggaggcaacatcagaaagggatgt
caaatctttgttagaaatttgccatttgacttcacctggaagatgctgaaggataccttc
aatacatgtggtatggtccagtatgctgatataaagatggaaaatggcaaatccaagggt
tgtggtgtggtacgttttgacaaccctgaaactgctgagcgagcctgccggaccatgaac
ggctatcgtctgaatgggagagagattgatgttaggattgatagaaatgcataa
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