Nothobranchius furzeri (turquoise killifish): 107392672
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Entry
107392672 CDS
T05163
Symbol
ccdc50
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107392672 (ccdc50)
Membrane trafficking [BR:
nfu04131
]
Autophagy
Other autophagy associated proteins
Others
107392672 (ccdc50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
107392672
NCBI-ProteinID:
XP_015826059
UniProt:
A0A8C6Q8V8
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Position
sgr17:22259480..22275870
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AA seq
600 aa
AA seq
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MADCNVSIDQKRLPGVKEVCKDFAVLEDHCLAYNLQEQEIESHLASNVHKNRLVQKDLQV
AKRLQEEEDERAKVQSQKQHDYIERQDNEIAQEIQEELVRQAERQRLMEEEDAAIARKLQ
EKEKIRDERRRQKQLEATSKDDYYEDHGAPRPLDVDKFTCQKTRSLDAYSPGRSHHDHSP
DYYSAEPKWSWYPKQDSAAPRGPSRYPEHHSVGERGRSRHADPYPEHLHPRGKHEDRCPE
FEPSHTARVRDEDREVRKKDRPGRPPPPKTAVERDRHDRERDHNWDKHVDRDYWRDKELD
LWPAREREKSRDRFPSGDRLGERDGVRQKDRERRQARSRDRGFEEEPGRRREQLRESRDS
WEDEEVGGKRRARSQQRVHSNPVDAFDGFMNDRGGGDSRELWESLQGDALGREHTETGHL
VHRGSGSVIAETAYGLNEATRELIKLDLREQELKDMEVARKLQQEELKAINLQARAAQMA
KDEELARRMMERDKKEYRKNREREKEKEKERERMAMERMAVNRRRPEGNYRPNSEEVVRP
RTRDEYEYHRQRNGNNSARSPQPHHDYENVNPSYGYPEHLGVSHPSTRHEVPYKGAYHKR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctgattgtaacgttagcatcgaccagaaaagactaccgggagtgaaagaggtgtgt
aaagactttgctgtgcttgaagaccactgtctggcctacaacctccaggaacaagagatt
gagagccacttggcttctaacgtccataagaaccgcctggtgcagaaggacctgcaggtg
gccaagaggctgcaggaggaggaggacgagagggccaaggtccagagccagaaacaacat
gattacatcgagcgacaagataatgagatcgcacaggagattcaggaagaactggtccga
caagcggagcggcagcggctgatggaggaggaggacgcagccatcgctcgtaagctgcag
gagaaggagaagatcagggacgagaggaggagacagaaacagctggaagctacctctaaa
gatgattactacgaggatcacggagctccacgacccctggatgtggacaaattcacctgt
cagaaaacccggtctcttgatgcgtactctccagggcgctcgcatcacgatcactctcca
gattattactcagccgagccaaaatggagctggtaccccaaacaggactctgctgcaccc
cgtggtccctccaggtacccggagcaccactctgtaggagaacgagggcgtagcaggcac
gcagacccgtatcccgagcacctgcaccccagaggaaagcatgaggacaggtgtccagag
tttgaaccttcacacacggcaagagtcagagatgaagatagagaggtgaggaagaaagac
agaccaggtagaccccctccaccaaagactgctgtagagagggacagacatgacagggag
agagaccataactgggacaaacatgtggacagagactactggagagacaaggagttggac
ttgtggccggccagagagagggaaaaatcccgagatcgattccccagtggggacagactt
ggagagagagacggagtgagacaaaaagacagagagagacgacaagcccggagcagggac
agaggatttgaagaggaacctggacgcagacgggagcagctgagagagagccgggactcc
tgggaggacgaagaggtcggtggtaagaggagggccaggagccagcagcgcgtccattcc
aaccccgtggacgcgtttgacgggttcatgaatgatagaggaggaggagacagcagggag
ctgtgggagtccctgcagggggacgcactcggaagggagcacacggagacaggtcatctt
gtgcacagagggagtggatctgtcatagcagaaacggcgtacgggctgaacgaggccact
agagagctgatcaagctggatctccgagagcaggagctgaaggacatggaggtggcaaga
aaacttcagcaggaggagctgaaggcgatcaacttgcaggcccgtgcagcccagatggcg
aaggacgaggaactggcccgacgcatgatggaacgtgacaagaaagagtaccgaaagaat
cgagagcgggagaaggagaaggagaaggaacgagagaggatggccatggagaggatggcg
gtgaataggagacggccagaagggaactataggccaaactctgaggaagttgtgcgtccc
cgaactcgagatgagtacgaatatcacaggcagcgaaacggcaacaattctgccaggtct
cctcagcctcatcatgactatgagaatgtaaaccccagctatggctacccagaacatctt
ggtgtctctcacccctccaccagacacgaagtcccctacaaaggtgcctaccacaagcgg
tga
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