Nothobranchius furzeri (turquoise killifish): 107392746
Help
Entry
107392746 CDS
T05163
Name
(RefSeq) 5-hydroxytryptamine receptor 3C-like isoform X1
KO
K04819
5-hydroxytryptamine receptor 3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107392746
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107392746
Ion channels [BR:
nfu04040
]
Ligand-gated channels
Serotonin (5-HT3)
107392746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
107392746
NCBI-ProteinID:
XP_015826183
UniProt:
A0A9D2XJR4
LinkDB
All DBs
Position
sgr17:19067229..19078172
Genome browser
AA seq
572 aa
AA seq
DB search
MQRSTFRIMTSKDKASKVPLSSTMPAVVVSIIFMPALCSTADVTCSKPNQPSLLAALTPI
FNLSAIRPVLNQTTVTNVSVSFTLYGILGVDEKAQLLTTYIWLDYWWMNEFISWDQAQCG
AKKISLPKEKFWLPDIVINEFMEENKAPSVPYVYLYNDGAVHDAMPVRVVSSCNLNIYTF
PFDVQNCSLTFNSYIYYAFEIQVLLGSPAENITEDSKSVMTTMGEWELLDITALKTPNND
TMLYIDELAFYIRLRRRATMYVVNLLLPSCFLITVDLFSFLLPPQSVDRSSFKMTLILGY
TVFLLIMNDLLPITGNTIPLINVFFSLCLALMVASLLETILITNLFCNSAGFSPVPRWIR
VLILKIIGCLVCMPQKKPKDSVQRTSTVVARGESDGGPRETKGSSEDNKALQELRSLNKV
LLDIRVQVEQQQKGKQSSEDWIQCCLMKIKPSKHLCILVSLLMIASCSSAALNCSQPGPT
SLLSSLQTAFDLSAIRPVVNMSTPTTVSIGFTLYGILGVDEKAQVLTTYIWQNLEWQNEF
TTWNAEECGVEWVAIPRTLLWVPDVVINELHV
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgctccactttccgcatcatgacatccaaggataaagcatcaaaggtccccctt
tcatccaccatgccagctgtggttgtttccattatttttatgccagctttgtgcagcacc
gcggatgtgacctgctccaaacccaaccagcccagcctcctggcggctctgactcccatc
ttcaacctgagtgccattcgccccgtccttaaccaaacgaccgtcaccaacgtcagcgtt
tccttcactttgtatgggattttaggagtggatgaaaaagctcagctgctgaccacttac
atttggctagattattggtggatgaacgagttcatcagctgggatcaggcccagtgtggc
gcaaaaaagatctctcttcccaaagaaaaattctggctcccagatattgtcatcaacgag
tttatggaggaaaacaaagccccgtctgtcccgtatgtgtacctgtataatgatggcgct
gtgcacgacgccatgcctgtcagagtcgtcagctcctgcaacctcaacatctacaccttc
cccttcgatgtccaaaactgttctttgactttcaactcctacatctactacgcctttgaa
atacaagttctcctcgggagtcctgcagaaaacatcacagaggactccaagtctgtgatg
accaccatgggcgaatgggagctgctggatatcaccgccctgaagacaccgaataacgat
accatgctttacatagatgagcttgcattttatatcagactgcggcgccgtgccaccatg
tacgtggtgaacctcctgctccccagctgcttcctcatcaccgtggacctcttcagcttc
ctgctgcctcctcagagcgtggaccgctcctccttcaagatgaccctcatcctgggctac
accgtcttcctgctcatcatgaacgacctgctgcccatcacaggaaacactattcctctc
ataaatgtgttcttctctctgtgcctggctctgatggtggccagtctgctagagaccatc
cttatcaccaacctgttttgtaattcagctggcttttctcctgttcctcgatggattcgg
gtgctcattctgaaaattattggctgccttgtctgcatgccacaaaagaaaccaaaagac
tcagtgcagaggaccagcactgttgtggcaagaggtgaatctgacggaggacctcgagag
acaaaggggtcatctgaggataacaaagccctgcaggagctgaggagcctgaacaaagtc
ctcctggacatccgcgttcaggtggagcagcagcagaaagggaagcagagctccgaggac
tggatccagtgctgcctgatgaaaatcaagccttctaagcatctatgcatcctcgtctct
ctgctgatgatcgcttcatgcagctctgctgctctgaactgctctcagcctggtccaacg
tcgctgctgagttctctgcagacagccttcgacctcagcgccatccgacctgtcgtgaat
atgtccaccccgaccacggtttccattgggtttaccctatatggtattttgggagtggat
gagaaggcccaggtcctgacaacttacatctggcaaaacctagaatggcaaaacgaattc
accacatggaatgcggaggaatgtggagtggaatgggttgcaattccacgaactctgctc
tgggtgccagatgtcgtcatcaatgaattgcacgtctaa
DBGET
integrated database retrieval system
