Nothobranchius furzeri (turquoise killifish): 107392795
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Entry
107392795 CDS
T05163
Symbol
comp
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04145
Phagosome
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04518
Integrin signaling
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107392795 (comp)
04518 Integrin signaling
107392795 (comp)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107392795 (comp)
09144 Cellular community - eukaryotes
04510 Focal adhesion
107392795 (comp)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107392795 (comp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107392795 (comp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107392795 (comp)
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107392795 (comp)
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Phagocytosis
Opsonins
107392795 (comp)
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107392795 (comp)
Exosomal proteins of colorectal cancer cells
107392795 (comp)
Exosomal proteins of bladder cancer cells
107392795 (comp)
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107392795 (comp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
EGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
107392795
NCBI-ProteinID:
XP_015826287
UniProt:
A0A1A8AM36
LinkDB
All DBs
Position
sgr17:complement(15509055..>15521940)
Genome browser
AA seq
745 aa
AA seq
DB search
MMWCFCLTFALCMGGKLAAGQRDGEIISQIKTTNMVLAEIKELLKQQIREVVFLKNTVME
CEACGMGGIQPVSPCEPNPCHPGVKCVETPEGPECGPCPDGMKGNGTRCIDVDECTVMPC
HMGVRCINTSPGFRCGSCPAGYTGPQVQGVGLAYATNNKQVCKDIDECEGPNNGGCVENS
VCMNTPGSFRCGPCKTGYIGDQRRGCKPERACGNGQPNLCHTNADCIVHRDGTIDCQCKV
GWAGNGYLCGTDTDIDGFPDEKLNCPDRNCNKDNCLTVPNSGQEDADGDKIGDACDDDAD
GDGILNTQDNCKLVPNVDQRNIDEDDFGDACDNCRAVKNNDQKDTDLDKYGDECDEDIDG
DGIPNHLDNCKKVPNSDQKDRDGDKVGDACDSCPYVPNPDQTDVDDDLIGDPCDTNKDSD
GDGHQDSRDNCPAVINSSQLDTDKDGKGDECDDDDDDDGIPDLLPPGPDNCRLIPNPLQE
DLDGDGVGDVCQKDFDNDTIIDPIDVCPENAEVTLTDFREYQTVVLDPEGDAQIDPNWVV
LNQGREIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVM
WKQVEQIYWQANPFRAVAQQGIQLKAVKSNTGPGENLRNALWHTGDTNEQVKLLWKDPRN
VGWKDKTSYRWSLQHRPAEGYIRVRFFEGPQMVADTGVIIDATMRGGRLGVFCFSQENII
WADLSYRCNDTLPEDFDSYQAQLVA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggtgtttttgtctgacctttgcactttgcatgggaggaaaacttgctgcagga
cagagagatggagaaattatcagtcagattaaaacgacaaacatggtgttggctgagatt
aaagagctgctgaaacaacagatcagagaggtcgtgttcctgaagaatacggtgatggag
tgtgaagcctgtggaatgggggggatccaacctgtctccccctgtgagcccaacccctgt
caccccggggtgaagtgtgtggagactcctgagggcccagagtgtggaccttgtcctgat
ggcatgaagggaaacgggacccgatgcatcgatgtagatgagtgtaccgtgatgccctgt
cacatgggcgtccgttgtatcaacacctcccctggtttccgctgtggctcctgtcctgca
ggatacaccggaccccaggttcagggagtcgggcttgcctatgcaactaacaacaaacag
gtgtgtaaagatatcgatgagtgtgaaggtcccaacaatggaggctgtgtggaaaactct
gtgtgcatgaacactcctggctcgttcaggtgtggaccctgtaaaacaggttacattggg
gatcagcggcgtggctgtaagcccgagagagcgtgtgggaacggtcaaccaaatctgtgc
cacaccaacgccgactgcattgtccatcgagatggcacaatcgactgtcagtgtaaagtg
ggatgggccggcaatggctacctctgtgggactgatactgacattgacggtttccctgac
gaaaaactgaactgtcctgacagaaactgcaataaggataactgtctcaccgtaccaaac
tctggccaagaggatgctgatggcgataaaattggagatgcatgcgatgatgatgcagat
ggagatgggatcctcaatacacaggataactgcaagctggtgcccaacgtggaccagaga
aacattgatgaggacgactttggcgatgcctgcgataactgccgtgcagtcaaaaacaac
gaccagaaggacacagatttggacaaatatggtgatgaatgtgatgaagacatcgatggg
gatggaattcctaatcacctggataactgcaaaaaagttcccaactctgaccagaaagat
cgggatggagacaaagtgggggacgcctgtgacagctgtccttatgttcccaaccctgac
cagacggatgtggacgatgacctgattggtgacccctgtgacactaacaaggacagtgat
ggcgatggtcaccaggactcccgggacaactgcccagccgtcattaacagctctcagctg
gacacagacaaagacgggaagggagacgagtgtgatgatgatgacgacgacgatggtatc
ccagacctactgccacctggtccagacaactgccgtctgatccccaacccactgcaggag
gacttggatggtgacggtgttggtgatgtgtgccagaaggattttgataatgacaccatc
atcgatcccattgatgtttgtccagaaaacgctgaagtcaccctgaccgacttcagggag
taccagacagttgtgttagatcccgagggagatgcacagattgaccccaactgggtggtg
ctaaaccagggccgagaaattgtccaaactatgaacagtgaccctggactggctgttggt
tatactgcatttagcggagtggactttgagggtacgtttcacgtaaacacggtaacggat
gacgactacgctggcttcatctttgggtaccaggatagctccagtttctacgtggtgatg
tggaagcaggtggaacagatctactggcaggcaaacccgttcagagccgtggcacagcag
ggcatccagctcaaggcagtcaagtcgaacacaggtccaggtgagaatctgaggaatgcc
ctgtggcacacaggtgataccaacgaacaggtgaaacttctttggaaagatcctcgaaat
gtcggctggaaagacaagacttcctaccgctggtccctgcaacatcgaccggctgagggc
tacatcagggttcgttttttcgaaggtccccagatggtggcagacacaggcgtcatcata
gacgccacaatgagagggggcagactcggcgtcttctgcttctcccaggaaaacatcatc
tgggctgacctcagttatcgctgcaacgacactcttcctgaagactttgacagctaccaa
gcccagctggtggcctga
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