Nothobranchius furzeri (turquoise killifish): 107392835
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Entry
107392835 CDS
T05163
Symbol
uba52
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03010
Ribosome
nfu04120
Ubiquitin mediated proteolysis
nfu04137
Mitophagy - animal
nfu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
107392835 (uba52)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107392835 (uba52)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107392835 (uba52)
04137 Mitophagy - animal
107392835 (uba52)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
nfu03011
]
107392835 (uba52)
04121 Ubiquitin system [BR:
nfu04121
]
107392835 (uba52)
Ribosome [BR:
nfu03011
]
Ribosomal proteins
Eukaryotes
Large subunit
107392835 (uba52)
Archaea
107392835 (uba52)
Ubiquitin system [BR:
nfu04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
107392835 (uba52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
zf-C4pol
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
107392835
NCBI-ProteinID:
XP_015826353
UniProt:
A0A1A7Z7U5
LinkDB
All DBs
Position
sgr17:14422955..14424926
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagacattgacagggaagaccatcactcttgaggtcgagcccagt
gacactatcgaaaatgtcaaggccaagattcaagacaaagaaggaatcccccctgatcag
cagcgtctgatctttgctggaaaacagcttgaggatgggcgtaccctatcagactacaac
attcagaaagagtcaaccctccatctggttctccgtctgcgtggtggaatcatcgagccc
tccctgagacagctggcccagaaatacaactgtgacaagatgatctgccgcaagtgctac
gcccgtctgcaccctcgtgccgtcaactgccgcaagaagaagtgtggccacaccaacaac
cttcgccccaagaagaagctgaagtaa
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