Nothobranchius furzeri (turquoise killifish): 107392872
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Entry
107392872 CDS
T05163
Symbol
tpr
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107392872 (tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107392872 (tpr)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107392872 (tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
107392872
NCBI-ProteinID:
XP_015826414
LinkDB
All DBs
Position
sgr17:12894485..12920888
Genome browser
AA seq
2364 aa
AA seq
DB search
MAALLEQELEASEISKLPKTVQSKLEKILSDRLYEIDSLKAQHELYRVNSEQQFFEKAEQ
LSQRQTELLSQTQELLKLKEEISKLGEELKDARERNSEFESVQERLSSEQTLLTKVKEDL
EAEKLELVRTLERRSLEVEHLNDDLRQLNDKLVDVSTSKMALQMKLDELEAAEINIKYKE
RRMEQEKELLHGQMTWLKEELKAKTEELLSLSRKKGNEILELKYSLESKVDELNKLRDQV
TSLKTSNEQLQKQSEDMINKLKEAKDQHASMEEKFRNELNANIKLSNLYKEEAADAETKS
EELSRAVDELQKLLKDAGEANKFLEEKLQETNSATEKTVGDLKERIQSLEKELDNANELL
SSAKIRGPAGTAVLTEEQMTTMSPTAAAVSKIKPGMKLTELYTAYLESQEQLQLERLENK
RVNKYLDDIVQEVEAKAPVLKRQRDEYERMQKSVSSLSAKLEQAEKEVLRLQNEADESNK
RASLLERDNQRFELQQADLAQQVRVLLIELEEARGNHVLHEEDVSSADVSSTSEVISKHL
VTFRSVEELQTQNQRLLVALRELGDAQEREEAETSGVRRVELEQSLERLQADLESLKEQR
NQQLKMAESLVRQRDMYRVLLAQATGVAFSHQGTPPDEFSLTTTPRRSPAATPTTGTPTA
LVSMAAESAEVIEAKAALRQLQEMFSAYKKERLESEKLMTQQNEKLQEQLSDLRSQNAKI
STQLEFASKRYEMLQDNVEGYRKEIALLRDRKSKSIAAMQKLEQAVHTLNEDLKTAKEKL
SMAEGDAENLRKERDMLKLVESRLKQEKETILSQNQNQNLLLSNLQTIQSTLERSETETR
QCLSSQIEKQEQLISQLQKKLEEEVEQHHLFSRNQELMEVKRQLETQIASHQKTKELLTA
AELELNTLKMQQGSAETRYTLSSPSTPVIRGQQGLDQDQEELRGRLQVAETQVEELTESL
KAATSSMEQYRAMAQSLEESLETEKQVTEQARSSIAVHLNEAEEQRRGLEAKLLESEKEK
QNFEEQKRKAVASLEEQINDLRRSLSEVQADYQAVQEQLAVCKTQQQQALQDSQEQATRV
AEAQDKYEQEMLLHAADMEALQAAKAQAQQATEFKQHLEEKVQRLSAELLEARVSWEEQE
KILKEEMSKMESRYEELQRQNTLLHEQVQTMSGRLAASIQSVAGESSLNVSLTEEGKSQE
QLLEILRFVRREKEIAESRFEVAQGESLRCRLRVEHLERELKEVQDTLSAARERMQVTAK
TLAQHDELMKKTETMNILMETNKMLREEKEKLEQELQQAKAKVQTLESDALPLQQVNTEL
SEKSGMLQSEKVLLEEEVKRWKARTQHLVSQQKDSDPDEFKRLHTEREGHLKRIQQLTED
NARLKAELTKSNNLTTAIQSQMQNLRDNMSKVNEERNALKKEIETKNEELLDKMRTINQV
KKIGRRYKTQFDELKSEHDRLLAEAAAGPSQDEEARQASVQELQRVKDSLNQAETRTKEL
EGQLENTNKVTVEREAEVRSSQEQCSRLQTELTRLRQELQDKASQEDSLKQQMAEKEEKT
RKALVIAKQRITHLTGTKDQLQKENEELKQQRDELKTQREELEMRVSALKSQYESRLSKQ
ERGLRELRSQQERQDQRDEQPEAGPSKIQEQQRSAEQRQISLKTTSSADRSSASTSDPPP
TANIKPTPVVATPSKQTNNPGSKPTPRASIRPMITPAPVPTPTPTATVMPTTQVETQEAM
QSTESPPVEHVTVYGSASGSVRSASPNVQTTLASPMLTVQQTQTQATAFVQPTQQQSVTH
SEPASQDPLPVVIEATPSSQVEWPSTSSTSSVFGTVSATPGTSALSKRPREEEESSVVTA
ETETTQEDTSRTPIAKKLRMIQRVGPEEEVLVEESGEAEGVVPSDSQDGAEPSQTEEFSN
LEEMEDDVATQSIMEHGVTPTQSETQDPLPQEVIVILTDSESEDEQDDDDEEEEEEQDYV
EEEEEDEEEEEEEDEEEEEDDGEMAEEGDDSNEGSGDGNEAYEGDDTEGADVTDPGTETE
ESLGASDSTQRPADSQTPSFEGSSMEAVSSDQPITSSGTRMPPSPRRPVHQLPPRLNIHP
ALTSELGPPRVPVRRQSVGRLTPGMSSTAQQQHFYEEDDRMVPSTPTLVPPRSDAFDQAI
HSPQVAGVPRFRFGPSEDLPQTSSSSHSDLGQLASQGGLGMYESPLFLATHEEEAGGRSV
PTTPLQVTAPVVFSEVAQSDTTEHASQSVPMVSTSTPSLVVPGTAGPGEERDIFLEPDTD
RPSVEVSMDPVVSQGDAEDPSQPSDRSNLPSTSQEPSSSSAASHVSADTSSAPPKLYRPG
PSRQLQRRGQAFPSRGVPGRRFLR
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactcctggagcaggagttggaggcgtcagagatttcaaaattacccaaaaca
gttcaaagtaaactagagaaaattctttccgatcgtctgtatgaaatcgattcattgaaa
gcacagcatgaactgtaccgggttaatagcgaacaacagttttttgagaaggctgaacag
ctcagccagaggcaaacagaacttttgtcccaaacacaagaactcctcaaactgaaagag
gagatctccaaactcggtgaagagctcaaagatgcccgggagaggaatagtgagtttgag
tctgtgcaggagagattgtcatcggagcagactttgctcacaaaagtcaaagaagacctg
gaggcagaaaaacttgaacttgtgcgaacgctggagaggaggtccttggaagtggaacat
ttaaatgatgacttgagacagctcaatgataagttagtggatgtcagcacctctaagatg
gctctgcagatgaagttagatgagcttgaagctgcagaaatcaacattaagtacaaggag
aggcgtatggagcaagagaaggagctgctacacggacaaatgacttggttgaaagaggag
ttgaaggccaagaccgaagaactgctgtctttgtctcggaaaaaggggaatgaaatcctg
gagctaaaatactctctggaaagtaaagtggacgagttaaataaactccgagatcaagtg
accagtctgaagacttcaaacgagcaacttcagaaacaaagcgaggacatgatcaacaaa
ctgaaagaagctaaggaccaacatgccagcatggaggagaagtttcgaaatgagctgaat
gcaaacattaagctttctaatctgtacaaggaagaagctgcggacgccgaaacaaaaagc
gaggagctgagtcgggcggtggatgaactgcagaaactgctcaaagatgctggtgaagcc
aacaagtttcttgaagaaaagctgcaggaaacaaacagtgcaacagaaaaaactgttggt
gatttgaaggaaaggattcagagcctcgagaaagagctggacaacgccaacgaactgctg
tcaagtgcaaagatcagaggccccgctggtacagctgtgttgacagaagagcaaatgaca
accatgtctccaacagcagcagctgtctccaaaatcaaacctggcatgaaactgactgag
ctgtacacggcgtacctggagagccaggagcagctgcagctggagcgactggagaataaa
cgagtcaacaaatatttagatgacattgtgcaggaagttgaagccaaagccccagtcctc
aaacggcaaagggatgagtatgagcgcatgcagaagtctgtgtccagcctttctgccaag
ctggagcaggctgagaaggaggtgcttcgtctgcagaatgaagctgacgagtccaacaag
cgggcgtccctcctggaacgggacaaccagcggtttgaactccagcaggctgatttggct
caacaggttcgtgtgctactgatcgagctggaagaagctcgtggaaaccacgtgcttcat
gaagaggatgtgagctcagctgatgtcagcagcacttcagaggtcatcagcaaacaccta
gttacctttcgcagcgtggaggagcttcagacccaaaaccagcgacttctggtggcgctc
agggagctcggtgatgcccaagagagagaggaggccgagacctcaggagttaggcgtgtg
gagctggagcaaagtttggagagactccaggctgatttggagtctctgaaagagcaacgc
aatcagcaactaaagatggccgagtcgctcgtaaggcagagggacatgtaccgcgtgctg
ctggctcaggcaacaggagttgctttctcccaccagggcacaccgcctgatgagttttct
ctgacgacaacccctcgacgttcaccagcagccacccccaccacaggaactcccaccgca
ctcgtctctatggctgctgagtccgctgaggtcattgaggccaaagctgctctgcgacag
ttacaggaaatgttctctgcctacaagaaggagcggctggagagtgaaaagttgatgact
cagcagaacgagaagctccaggagcagctgtctgacctccgctctcagaatgcaaagata
tcaacccagctggagtttgcctccaagaggtacgagatgctgcaggacaacgttgaaggc
tacaggaaagagattgccttgcttagagatcggaagagcaagtcgatcgccgccatgcag
aagttggagcaggccgttcacactttgaatgaagatttgaaaaccgccaaggagaaactc
tccatggctgagggcgatgctgagaaccttcgcaaggagagagacatgctaaagctggtg
gaatcccgcttgaagcaggagaaggagacaatcctgagccaaaaccagaaccagaacctg
ctactgagcaatcttcagactattcagtccactcttgagcgttcagagactgaaacccgt
cagtgtctcagcagccagatagaaaagcaggaacagctgatctcccagctgcagaaaaag
ctcgaggaagaagtggaacagcaccacctgttcagcagaaatcaggagttgatggaggtg
aagaggcaattggagactcagattgcttcacatcagaaaaccaaggagctgctgactgct
gcagagttggagctaaacaccctgaagatgcagcagggcagcgctgagacccgctacacc
ctgagctccccatctacaccagtcatcagaggtcaacagggtttggatcaggaccaggag
gagctccggggccgcctgcaggtggccgaaacccaggtggaggagctgacggagagcctg
aaggctgctacctccagcatggagcaatacagagcaatggctcaaagcctggaggaatct
ctggagacagagaaacaggtaacagagcaggctcgctcatccattgcggtccatttgaat
gaggctgaggagcagcggcgtgggctggaggcgaagctcctggaatcggagaaagaaaag
cagaactttgaggagcagaagaggaaagctgttgcttctcttgaggagcagataaatgac
ctgaggaggagcctcagcgaggtgcaggctgattaccaggctgtgcaggagcagctggct
gtgtgtaaaactcagcagcagcaggctctgcaagacagccaggagcaggctacgcgggtt
gctgaggctcaagataaatatgagcaagagatgttgctgcacgcagctgatatggaggct
ctgcaggctgccaaggcccaggctcagcaggctactgagttcaaacaacatctggaggag
aaagtccagaggctcagtgctgagttactggaggccagagtctcctgggaggagcaggag
aagatcctcaaggaagagatgtctaaaatggagagccgctatgaggagctgcagaggcag
aacactctcctgcatgagcaggtccagacgatgagcggcaggctagctgctagcatacag
agtgtggccggtgagagttcactgaacgtgtctctgactgaagagggcaaatctcaagaa
cagcttctagagatcctccggtttgtgcgtcgagaaaaggagatagcagaatcccgtttc
gaggtcgcccagggggagagtttacgttgccgactgagagtggagcacctggaacgtgag
ctcaaagaggtgcaggacaccttaagtgctgcaagagaaaggatgcaggtcactgcaaag
acgctcgctcaacatgatgagctaatgaagaagactgaaacgatgaacatcctaatggag
accaacaagatgttgagagaggagaaagagaagctggagcaagaactgcagcaggctaaa
gcgaaggtgcagacgttggagtcggacgccttgccgctgcagcaggttaacactgagctg
agtgagaagagcgggatgctgcagtcggagaaggtgctgctggaggaggaagtcaagcgc
tggaaggctcgaactcagcatttggtgagtcagcagaaagattcggatcctgacgagttt
aagcgcctacatacggagagggagggccatctgaaacgcatccagcagctcaccgaggac
aacgctagactcaaagcagagttgaccaaatcaaataatctcacaaccgccattcagagt
caaatgcagaacttacgtgacaatatgagtaaggtgaacgaggagaggaacgcgctgaag
aaggaaatagagaccaaaaacgaagaacttctggataagatgcgaactattaaccaggtt
aagaagatcggacgccgctacaagactcagtttgacgagctgaagtcagagcatgatagg
ctgttggcggaggcagcagcgggcccgtcccaagacgaggaggcacgccaagcttcggtt
caagaactgcagagggtgaaagactctttgaaccaggctgaaaccaggaccaaagagctg
gaaggacagctggagaacaccaacaaggtgactgtggagcgagaggctgaagtacgcagt
agccaggaacagtgttccaggctgcagacggagctgaccaggctgaggcaggagctgcag
gataaagcttctcaggaggactctctgaaacagcagatggccgagaaggaggagaagacc
aggaaggctcttgttattgccaagcagaggatcacccatctcactggtaccaaagatcag
ctgcagaaggaaaacgaggaactaaagcagcagcgagatgaattgaagacgcagcgggaa
gaactggagatgagagtgagtgctctcaagtctcagtacgagagtcggcttagcaaacag
gagagaggactccgagaactgcgaagtcaacaggagagacaagatcagagagatgagcag
cctgaggctggtcccagcaagattcaagagcagcagaggagtgccgaacagaggcagatc
agtctgaagactacttcatctgcagacaggagcagcgccagcacttctgaccctcctccg
actgccaacattaagccaacgcctgtagtcgccacacccagcaaacagaccaacaacccg
ggaagtaaacccactccacgagcaagcatcagacccatgattaccccggcccccgtgccc
acaccaacaccaactgctacagtcatgccaaccacacaggtggagacccaggaagccatg
cagtcgactgaaagcccaccggtggagcacgtgaccgtgtacggcagtgccagtggttct
gtgcgctccgccagcccaaatgtccagaccactttagctagtcccatgttgaccgtgcag
cagacccagacccaggccacggcatttgttcagccgacgcaacaacagagtgtgacccac
tcagaaccggccagtcaggaccctctgccagttgtgatcgaggcaacgcccagttctcag
gtggaatggccatcaacgtcttccacttcctctgtgtttggcactgtttcagcgacaccg
ggaacttctgctttgtccaagaggcctcgtgaggaggaggaaagcagcgtcgtgaccgct
gagaccgaaacaacccaggaggacacctccaggactcccatagccaaaaagctgcgcatg
atccagagagtgggcccagaggaggaggttctggttgaggagagtggcgaagctgaaggc
gtagttccatcggacagtcaggatggtgcagagccaagccagacggaggagttctctaac
ctggaggaaatggaggatgatgtcgctactcagtccatcatggagcacggggtcacccca
acccaaagtgagacccaagaccctctgccgcaggaggtcattgtcatcctgactgactct
gagagtgaagatgagcaagacgacgacgacgaggaagaagaggaagagcaggattatgtg
gaggaggaggaagaagatgaagaagaggaggaggaggaagatgaagaagaggaggaagac
gatggagagatggcagaggaaggagacgacagtaatgaggggagtggagatggcaatgag
gcctatgaaggggacgacacagagggagctgatgtcacagacccgggcacagagacagag
gagagtctgggggcgtccgactccacccagaggcctgcagattcccagactcccagcttt
gaggggagctccatggaggccgtctcctctgaccaaccaatcacaagttctggcacacgt
atgcctccgtcaccacggagacctgtgcatcagctgccgcctcgactgaacatccatccc
gctctgacatcagaacttggaccgcctcgcgttcctgtacgacgccagtcagtaggtaga
ctcacccctgggatgtcgagcacggctcagcagcaacatttctatgaggaagatgacaga
atggttcccagtactcccactctggtgcctcctcggtctgatgcttttgaccaggccatc
cattctccccaggttgcaggagtccctcggttcaggtttggcccttcagaagatctgcca
cagaccagctcctcctcacactctgacctgggacagctcgcttcacaaggaggtcttggg
atgtatgaaagtcctctgttcctggcaactcatgaagaggaagctggtggacgcagcgtt
cccaccactccgttacaagtcactgctccagtagtgttctcagaagtagcacagtctgac
acaacggagcacgcctcccagtccgttcccatggtgagcacatctacacccagcctagtt
gtaccaggaacggccggtccaggggaggagagagacattttcctggagccagacactgat
agacccagtgttgaggtgtccatggatcctgtagtgtctcagggagacgcagaagacccg
agtcaaccatctgacaggtccaaccttccctccaccagccaggagccctcttccagctct
gcagcgagtcacgtgtctgcagatacaagcagcgctccccctaaactctatcggcctgga
cccagtagacagctgcagcgcagaggtcaggccttcccgtcccggggtgtccctggaaga
cgatttctgagatga
DBGET
integrated database retrieval system
