Nothobranchius furzeri (turquoise killifish): 107392923
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Entry
107392923 CDS
T05163
Symbol
ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107392923 (ddx17)
Enzymes [BR:
nfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107392923 (ddx17)
Spliceosome [BR:
nfu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107392923 (ddx17)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107392923
NCBI-ProteinID:
XP_015826487
UniProt:
A0A8C6LCD4
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All DBs
Position
sgr02:complement(29692695..29702811)
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AA seq
641 aa
AA seq
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MRGGSSYGDRDRDRGRDRPRFGGGMGGRNGPPPMKFGNPGERLRKKRWNLDELPKFEKNF
YNEHPEVQRMSQYDIEEIRRKKEVTVRGSGCPKPLTAFHQAHFPQYVMDVLMHQNFKEPT
AIQSQGFPVALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRE
LAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLREYI
QINIGALELSANHNILQIVDVCMETEKDDKLIQLMEEIMAEKENKTIIFVETKKRCDDLT
RKMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDY
PNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVDSG
RGGGGGGRMRYRGSNANNPNLMYQDECDRRMRPGGGGGKDNRGNFNRDEDRSSSYRDRGR
DHRNNYNSGSDQYQSYNNNNSGGYNSRGPGHPGSVQDQSGQPQGQFSQGPPIAPPSGGPQ
PLMAQQFPPPQPPLMGFMGQPAYPFSSPPPAAQPPHKPGGP
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagagggggttcatcttatggagacagggacagagaccgtggacgagacaggccaagg
tttggagggggcatgggtggccgcaacggaccaccacccatgaagtttggtaaccccggt
gagcgtcttcgcaagaaaagatggaacctggatgagctgccaaagtttgaaaagaacttc
tacaacgaacacccagaggtccaacgaatgagtcagtatgacattgaagagattcgcagg
aagaaggaggtcaccgtcagaggctcaggctgcccaaagcctttaactgctttccaccag
gcacattttcctcagtatgtgatggatgttctgatgcatcagaacttcaaggagcccaca
gcgatccagtcccagggtttccctgtggccttgagcggcaaggacatggtgggaatcgct
cagacgggctctggaaagacactggcttaccttcttccagctattgttcacattaatcac
cagccctatctggaaaggggggatggtcctatatgtctggtcctcgctccaactagagag
ctggcccagcaggttcagcaggtcgctttcgactacggcaagtcatcccgcatcaaaagc
acctgcgtctatggtggagcaccaaaagggccccagattcgtgatcttgagcgtggtgtt
gagatctgcatcgccactcctggtcgtctgattgactttttggaggcggggaaaaccaac
ctgcgccgctgcacctacctggtgctggatgaagctgaccgcatgctggatatgggtttt
gaaccgcagattcgcaaaatagtcgaacaaatcaggcctgacagacagactctcatgtgg
agcgcaacttggccaaaggaggttcgtcagctggcggaggacttcctgagggagtacatt
cagattaatattggtgctctggagctcagtgccaaccacaacatcctgcagatcgttgac
gtctgtatggagactgagaaggacgacaaacttattcagctgatggaggagatcatggct
gagaaagagaacaaaaccatcatttttgtggagaccaaaaaacgatgtgacgatctcacc
cggaagatgaggcgtgacgggtggccagccatgtgtatccatggagacaagagccaacca
gaaagagactgggtacttacagagtttcgaagcggcaaagccccgattctgatcgctact
gacgtggcgtctcgtggtctggacgtggaagacgtgaagtttgtcatcaactatgactat
cccaattcctctgaggattacgtgcatcgtatcgggcgtacggctcgcagcaccaataag
ggcaccgcctacaccttcttcactccgggaaacctgcgacaggccagagaccttgtccgg
gtgctggaggaagcccggcaagccattaatcccaaactgctccagctggtggactcgggt
cgaggaggaggcggcggtggcaggatgcgctaccgtggcagcaacgccaacaaccctaac
ctcatgtaccaggatgagtgcgatcgacgcatgcgccccggcggaggcggcggcaaggac
aaccgtggcaacttcaaccgcgacgaagaccgctcctcttcctacagggacagaggccgg
gatcacaggaacaactacaactccggttcggaccagtaccagagctacaacaacaacaac
agtgggggctacaactctcgtggcccgggtcaccccggcagcgtccaggaccagtccgga
cagccacagggtcagttcagccagggtcctcccatagcgccaccctcaggcggccctcag
cctctgatggctcagcagttccccccacctcagcccccactcatgggcttcatggggcaa
cccgcttaccccttctcctctcctcctccggccgcgcagccgccccataaaccagggggt
ccttaa
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