Nothobranchius furzeri (turquoise killifish): 107392924
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Entry
107392924 CDS
T05163
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04136
Autophagy - other
nfu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107392924 (atg4c)
04136 Autophagy - other
107392924 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nfu01002
]
107392924 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107392924 (atg4c)
03029 Mitochondrial biogenesis [BR:
nfu03029
]
107392924 (atg4c)
Peptidases and inhibitors [BR:
nfu01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
107392924 (atg4c)
Membrane trafficking [BR:
nfu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
107392924 (atg4c)
Mitochondrial biogenesis [BR:
nfu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107392924 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
107392924
NCBI-ProteinID:
XP_015826483
UniProt:
A0A1A7ZER3
LinkDB
All DBs
Position
sgr17:10648781..10665293
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AA seq
475 aa
AA seq
DB search
MENKGSDEVEKLKTKFMSAWHNVKYSWALKLKTSFSRDSPVFLLGKCYHFKAEDDDCFSQ
TSCEASGEDCATGNVEAFRKDFASRVWLTYREDFAPLPGSTLTSDCGWGCMLRAGQMMLA
QALVLHFLGREWTWSEALTLQPLDTETWTATAAKRLVTSLEASLQGAMRTSDSKPSPAPS
GQNPGSAEEADAHLKEMNHRTLVSWFGDTSSAPLGLHRFVYLGQTMGKQAGDWYGPSVVA
HILKKAVKKAMDPGLAGITAYVSQDCTVYSADVLDCHKAPRAGETPDDTPRNGPAPQPTP
PNNRAVVILVPVRLGGERTNPVYFEFAKSVLSLEYCIGIIGGKPKQACYFVGFQDDSLIY
MDPHYCQSFVNVSSSDFSLQSFHCPSPKKMPFSKMDPSCTIGFYSRSAEDYERISEELSK
LLQPSAKEKYPAFTFMQGHSRDYDLSAGLNPGKREWPFIRDKPRIVTTAGDFVLL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaagggagcgacgaggtggaaaaactgaagactaaattcatgtcagcgtgg
cacaatgtgaaatacagttgggctctcaaactcaagacatcattcagtagagattctcca
gtgttccttctggggaagtgttaccatttcaaagctgaagatgacgactgcttttctcaa
accagctgtgaagcttctggtgaggactgtgccacggggaacgtagaggcttttcgaaag
gattttgcgtcccgagtgtggctgacctaccgggaagatttcgctcctctcccaggcagc
accctgacctctgactgtgggtggggctgcatgctgagggctggacaaatgatgctggct
caagctcttgtgctgcactttttgggcagagaatggacgtggtcagaggcgctcaccctt
cagcctttagacacagaaacatggaccgccactgcagcaaagcgtctcgtcacctctctg
gaggcttctctgcagggtgccatgaggacctctgacagcaaaccatctcctgcaccttca
ggccaaaatccaggatcagcggaggaggcggatgcacatctgaaggagatgaaccaccgc
actctggtctcctggttcggggacacctcctcagctccactgggtctgcaccgatttgtg
tatttaggacaaacaatgggaaagcaggcaggggactggtatggcccatccgtggtggct
cacatcctcaagaaagccgtcaaaaaagcgatggaccctggcttggcgggtataactgcc
tacgtctcccaggactgcacagtttacagtgctgatgtgctggactgccacaaggcgccc
agagcaggagagactcccgatgacacgccaagaaacggaccagcgccgcagcccacgccg
ccaaacaaccgcgccgtcgtcatcctcgttcctgtgaggctgggaggagagaggacaaat
ccggtgtattttgagtttgcaaagagcgtactgagtctggagtactgcataggcatcatc
ggaggaaagcccaaacaggcctgctacttcgtgggatttcaagacgacagcttgatttac
atggatcctcattactgtcagtcttttgtgaatgtcagcagcagcgacttctctctgcag
tcgtttcattgcccctcaccaaagaagatgccttttagcaaaatggatccaagttgcact
attggcttttattccagaagtgctgaagactacgagagaatcagtgaggagctgtccaag
ttgctgcagccgtccgcaaaggagaaatacccagcgttcactttcatgcaaggtcacagc
agagattacgacctgtcggcgggcctgaacccggggaagcgagagtggcccttcatccga
gacaagccgaggatcgtcaccaccgcaggggacttcgtgctgctctga
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