Nothobranchius furzeri (turquoise killifish): 107392993
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Entry
107392993 CDS
T05163
Symbol
sox2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107392993 (sox2)
Transcription factors [BR:
nfu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107392993 (sox2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Cohesin
Motif
Other DBs
NCBI-GeneID:
107392993
NCBI-ProteinID:
XP_015826589
UniProt:
A0A1A8ATN4
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Position
sgr17:6803642..6805952
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AA seq
322 aa
AA seq
DB search
MYNMMETELKPPAPQTNTGGTGNTNTTGNGTNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLAPGGNGMGTGVGVGVGAGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQL
SYQHPGLNAHNPSQMQSMHRYDMSALQYNSMTSSQTYMNGSPTYSMSYSQQTTPGMTTLG
SMGPSSVVKSESSSSSPPVVTSSSHRAAPGCQSGDLRDMISMYLPGAEVSDQSAQTRLHM
SGHYQSAVPGTTINGTLPLTHM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagcccccagctccccagaccaacacggggggc
acgggaaacaccaacaccacggggaacggcaccaaccagaaaaacagtccggagcgggtc
aagagacccatgaacgcgttcatggtgtggtcccggggccagaggaggaagatggcgcaa
gaaaaccccaaaatgcacaactccgaaatcagcaagcggctgggagcagagtggaagctc
ctgtcggagagcgagaaaagacctttcatcgatgaagccaagaggctgagggccctgcac
atgaaggagcatccggattacaaataccggccccggcggaaaaccaagaccctcatgaag
aaggacaagtacaccttgcccggcgggctgctggctcctggaggaaacgggatgggcact
ggagtcggtgtcggggtgggggccggactgggcggtggagtgaaccagcgcatggacagt
tacgcagcgcacatgaacggctggaccaacggtggctacggcatgatgcaggaccagctg
agctaccagcacccgggtctgaacgcgcacaacccgagccagatgcagtccatgcaccgc
tacgacatgagcgccctgcagtacaactccatgaccagctcccagacctacatgaacggc
tcccccacctactccatgtcctactcccagcaaaccacgccggggatgaccaccctgggc
tccatggggccctcctcggtggtcaagtccgagtccagcagctccagtccgcccgttgtc
acctcctcgtcccaccgggccgctcctggctgccaaagcggggacctgagggacatgatc
agcatgtacctgcccggggccgaggtcagtgaccagagcgcccagaccaggctacacatg
tccggccactaccagagcgccgtgcccgggacgacgatcaacggcacgctgccgttaaca
cacatgtga
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