Nothobranchius furzeri (turquoise killifish): 107392995
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Entry
107392995 CDS
T05163
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107392995 (fxr1)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107392995 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
107392995 (fxr1)
mRNA cycle factors
Stress granule specific factors
107392995 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
107392995
NCBI-ProteinID:
XP_015826590
UniProt:
A0A9D3BC21
LinkDB
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Position
sgr17:6578879..6596488
Genome browser
AA seq
736 aa
AA seq
DB search
MNTCRPGILCVSNMEELAVEVRGSNGAYYKGFVKDVHGDSLTIAFENNWQPERQVPFSDV
RLPPPADAKKEIGEGEEVEIFSRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIV
TFDRLRPVNPNKAITKNSFHKCTVPVPQDLQEACQGENAHKDFKKAVGACRITYCPETSE
LVIVSTNDSTVKRVSLLSDMHLRGLRTKLLLMSRNQEATKHLETSRQLVSSFQQEFTVRP
DLMGLAIGSHGSNIQQARKVPGVSAIELDEETGTFRIYGETEEAVKQARNFLEFVEDSVQ
VPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNDNKQPRQETQGMVPFTFVGTKESIG
NVQVLLEYHISYLNAMGELLAEGQQLEEELRQIVDYTQGSSLASFRMKSSRRTGCDVDEV
EQLRLERMQIDEQLRQVTQGYRPADRERGDRGERGGFNTENSVGTPSSSLRGSRSYNGRG
RGRRGHSYSTGYGTNSEQSNASETDSERKDELSDWSLAGEDQDGERERGARPQRDGRRRP
GPGRGRGGPGGRGRGGRGGYNYSSAPRDHDNYQPYGTLEANTETDQTADTDASESNLPAN
RRRRSRRRRTDEDATLMDGMSESDNASLSENGLDVKPQRRNRSRRRRAHLPEERQPVTVA
DYISRAESQSRQTNTKDTKKPKDVGQVEAIAEHSPQSAPPTTNGSSNGATKSPPEKPAKA
SHTEDSNPEPVVNGLS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctgtcgtcccggcatcctttgcgtgtccaatatggaagaactggcggtggag
gtccgtggctccaacggcgcttattataagggctttgtcaaagatgtccacggtgactct
ctcaccattgcctttgagaacaattggcagccagaacgccaggtgcccttcagtgatgtc
agattgccaccgcctgctgatgccaagaaggagatcggagagggcgaggaggtggagata
ttctccagagccaatgaacaggagccttgtggttggtggctagctaaagttcgcatgatg
aagggagatttctatgtgattgagtatgcagcttgtgacgccacttacaacgaaattgtt
acctttgatcgtctgcgaccagtcaaccctaacaaggccattaccaagaactcctttcac
aagtgcactgtccctgttcctcaggatctgcaagaagcgtgtcagggtgagaacgcacat
aaagactttaagaaagcggtgggagcctgtcgcatcacgtactgccctgagaccagtgag
ctagtgattgtgtccaccaatgactcaacggtgaagcgtgtatctttgctgagcgacatg
cacctacgcggcctcagaaccaagctgctgttgatgtcacgcaaccaggaggccacaaaa
cacctggagacctctaggcagctggtgtcatccttccaacaggagttcacagtgagacca
gacctgatggggctggctatcggcagtcacggaagcaacatccagcaagcgcgcaaggtt
ccaggtgtctctgccatcgagctggatgaggagactggtactttcaggatttatggagag
acagaggaggccgtaaagcaggccaggaacttcttggaatttgtggaagattcggtccag
gtgccaagaaaccttgttggtaaagtgattgggaagaacggtaaggtcatccaggagatt
gtggacaagtctggcgtggtgagagtcagaatagagggggacaatgacaacaagcagccc
cggcaggagacacagggaatggtcccatttacctttgtcggcactaaggagagcattggc
aacgttcaggtcttgctggagtaccacatctcatatctgaacgccatgggggagcttctt
gcagaaggccagcagctagaggaagaactgaggcagattgtggattacacgcagggaagc
agcctagcaagtttcagaatgaaaagctcaaggcgcactggatgtgatgtagatgaggtt
gagcaacttcgtctggagcggatgcagattgatgaacagttacgtcaggtcacccagggt
taccggccagctgaccgggagcgaggcgataggggagagagaggaggatttaacaccgag
aacagtgtcggtacgccttcatcttccttacgtggtagccgctcctacaacggccggggg
cgtggacgcagaggccatagctacagcaccggatacggcaccaactcggagcagtccaat
gcctctgagaccgattcagagcgcaaggatgagctcagcgattggtcccttgctggagag
gatcaggatggggagagagaacgaggcgctcggccacaaagagatggtcgtagaaggccg
ggacctggcagaggtcgagggggacctggaggaagggggagaggaggcagaggaggatac
aactacagttctgcgcctcgggaccatgacaactaccaaccctatggaaccttggaggca
aacactgagacggaccagacagctgacaccgatgccagcgagtccaacctgccagcaaac
cgccgccgaaggtcacggcgtcgcagaacagatgaagatgccactctgatggatggcatg
agcgagtctgacaacgcctcgctgagtgaaaatggcttagatgtaaaacctcagcgccgc
aaccgtagccggcgtcgccgcgcccacctgccagaggagaggcagccagtgaccgtggct
gactacatatccagggctgaatctcagagcaggcagacaaacaccaaggacacaaagaaa
cccaaggatgtgggtcaggtggaggctattgctgagcacagtccgcagtctgctccgcca
accaccaacggctcgagcaacggcgccaccaagtctccccctgagaagcccgccaaagcc
tctcacacggaggactcgaacccggaacctgtcgttaacggactctcctag
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