Nothobranchius furzeri (turquoise killifish): 107393000
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Entry
107393000 CDS
T05163
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107393000 (hps3)
Membrane trafficking [BR:
nfu04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
107393000 (hps3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
107393000
NCBI-ProteinID:
XP_015826603
UniProt:
A0A8C6MAH5
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Position
sgr17:6472584..6497187
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AA seq
1062 aa
AA seq
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MVHVYNCHPFTSQQIVQVEQEPGLVCCGGGALIVVATGGCKVEAYSLEEEGCPLICRFAT
MGAVRKIQHSKIGDYLVTIEEKNSAIYLRAYTNWRCQAEEKARIGVRLLGHLLRGASAWG
GVQTEIIEIPLSDHPVAVACCSVTGDLLVGCENTLVLFTLKRQNEENLNPNQQNPLSFWS
SAQQSCSPVAGQTSSSCQKDSFLDFERSVILHLSKMTPKQVALCGGFVAVQAELEVLVLK
LEVTSEPTMQESSDAHPSGDYLEDQSDFLLIPRHQELLGNRAEDCDVVVGVENTGLEDGR
RYTRTYVLFRRFSPEFFQGCSVEEMQLHSLQLYPLFTSNQSPLLDEPACVFCFFSLPNAG
YLYSLRGGVELLSTYQYPEKVQEAVLTDHLLHVITKSALQSFTVRCAAVAARIEDPYIDT
TIKACPPSSLETCALRMQLFIGLRSICVYGRHVVLFSAADSEAPEETERHTQRRGLELQE
HNMLTGIFLAVGIDPATSPALKSLLSRPFLTRRWIITSPKETRTAGHGWNLYVVDMVSPL
TLYQEMAEYSQNYAENNPQSQSLRHLLSEAHLLVRTALLQTSKRHQDSTGDPDEKMATLT
EKQELEEVFRQNCSQLGDSFSRGSPKDCHLALPYYRMSGLSVTDVMSRNRPLPGSPHSYG
PGFLFYLKHYLFEETDETLSTETADEVIDIFSQSEPSLLVTVCASPCMKNVNPARTLQIL
QCLEDTAGVSVSLTITMATMMLHLGNLPQYTELMERHAEMLLVYGFIEEPRLLLHDGGGG
GKKEQVCTTALARQLANSQPGLLVAAMVALHENSKVQLEQADFIFKELSCDNSLQVDFWE
AMLMASSQDAVIQELLFRLASVYIDRLTNTISNTTSKQKSLKSAEDLISSCSHFGALHPW
LTVLNPAQMSSSQHQEALHKLQALLCGPSLSVGTVVPLLERLSEETTWGFSLHLLCATRR
EQYDWSIEKLLDRCPQAIIAYANHHLQDKHMALWWTKLLPELCDRTRAAADGSILLSVLN
ETLVVVAMETSPLEFLELVPDDGTASYFLPYLLTCSQRNVKA
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgtgtacaactgccatcccttcacctcccagcagattgttcaggtggagcag
gaacctggattggtttgctgtggaggcggagcgctgattgtggtggcgacgggaggatgc
aaggtggaggcctacagcctggaggaggagggctgccctctcatctgtcgctttgccacc
atgggagctgtgaggaaaatccagcacagtaaaataggagactacttggtaactattgag
gaaaagaatagcgccatctacctgagagcctacacaaactggcgctgtcaggcggaggag
aaggcccgcattggggtgcgtttactgggccacttgctgcgtggagcgtcggcgtggggc
ggcgtgcagacggagattatcgagatcccgctgtctgatcatcctgtcgccgtggcctgt
tgctctgtgaccggagatcttctggtcggctgtgagaacactttggttctttttaccttg
aagagacagaacgaggagaatttgaatccgaaccagcagaaccctctgagtttctggtcc
agtgctcagcagagctgcagtccagtcgcaggtcagacctccagttcttgtcagaaagat
tccttcctggattttgaacgctcagtcatcctgcatctttcaaaaatgactcctaagcag
gtggcgctgtgtggagggtttgtggctgtgcaggcagagctggaggtgctggtgctgaag
ctggaggtgacatctgagccaaccatgcaagaatcctcggatgcacacccgagcggcgat
tatctggaggaccagagtgattttctgctgattccgcgacaccaggagctgctcgggaat
cgagcagaagactgcgacgtcgtggtcggcgttgaaaacactggactggaggacgggaga
cggtacaccaggacctatgtccttttcaggcgtttctctcctgagttctttcaaggctgc
agcgtggaggagatgcagctccactcactgcagctctacccgctgttcaccagtaaccag
tcgccacttctggatgagccagcgtgcgtgttctgtttcttctctctccccaacgctggt
tacctgtacagtctgaggggcggagttgagctgctctccacctatcagtatccagagaag
gtgcaggaggcggtgctaacggatcacttgttgcatgtcataacaaagagcgctttgcag
tccttcactgtgcgttgtgctgcagtcgcagccaggatagaagacccctacatcgacacg
actataaaggcgtgtccacccagcagcctggagacttgtgcgctcagaatgcagttattc
attggcctgcggtccatctgtgtctacggccgccacgttgttcttttctctgctgctgac
tcagaagcaccagaggaaacggaacgccacacacagcgccgaggcctcgagttacaagag
cacaacatgctgactggtattttccttgcggtgggaatcgatcccgcaacctcaccagct
ctgaagagcctcctatcacgtcccttcttgaccagaaggtggataataacctccccgaaa
gaaaccagaacagccggacatggatggaacctctacgtcgtcgacatggtctcgcctctc
actctctaccaggagatggctgagtatagtcagaactacgctgaaaacaacccacagagc
caaagtcttcggcacctcctcagtgaagctcacctcctcgttcgcaccgccttactgcaa
acatcaaagcgtcatcaggacagcacaggcgaccctgatgagaagatggccacactgaca
gagaaacaggagctggaggaggtgttcaggcagaactgttcccagctgggagacagtttt
agcaggggaagtccaaaggattgccacctggctttgccatattacaggatgtctggtctg
tcggtcactgatgtcatgtccaggaaccgcccactcccaggcagccctcactcctacggc
cctggcttcctgttttatctaaaacattacctttttgaggaaacagatgagaccctcagc
acggaaacggctgatgaggtcattgatattttcagccaatcggagccctcactgcttgtg
actgtgtgtgccagcccatgcatgaagaacgttaatcctgctcggacactgcagatctta
caatgcctggaggacaccgccggagtttcagtatctctaaccatcaccatggcaaccatg
atgctgcacctgggcaacctaccccagtacacagagttaatggagcgacatgctgagatg
ctgctggtgtacgggttcatcgaggagccgaggctgctgctgcacgacggaggaggagga
ggcaagaaggagcaggtctgcaccacagcgctggctcgacagctggcaaactcccaacct
ggactgctcgtggccgccatggtggctttgcacgagaacagcaaagttcagctggaacag
gctgacttcatcttcaaggagctgagctgtgacaacagcttacaggtggatttttgggaa
gcgatgctgatggcctcttcccaggatgccgtcattcaggagcttcttttccgtctggcg
tctgtttacatcgaccgactaacaaacacaatcagcaacacaacatcaaagcaaaagtcc
ctgaaaagtgccgaggacctgatcagttcctgctctcattttggagctctccacccgtgg
ctcactgttctcaatccagctcaaatgtccagctcccaacaccaggaggcgctgcacaaa
ctacaagcgctgctgtgcggtccgtccctctctgttggaaccgtggttcctctgttggag
cgtctgtcagaggaaaccacatggggcttcagcctgcacctcctttgtgccaccagaagg
gagcagtatgactggagcattgagaagttgttggacagatgtcctcaagccattatagct
tatgccaaccaccacttacaagataagcacatggctctctggtggacgaagctgctgcct
gagctctgtgaccggacgcgagctgccgctgacggcagcatcctgctgagtgtcctcaac
gaaacactggtcgtggttgccatggagacgagcccgctggagttcttggagcttgttcct
gacgatggcacggcatcatacttcctgccttacctgttgacatgcagccagagaaacgtt
aaggcctga
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