Nothobranchius furzeri (turquoise killifish): 107393130
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Entry
107393130 CDS
T05163
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K23213
paired amphipathic helix protein Sin3b
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107393130 (sin3b)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
107393130 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
At4g15545_C
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
107393130
NCBI-ProteinID:
XP_015826799
UniProt:
A0A1A7ZG18
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Position
sgr17:24011990..24041379
Genome browser
AA seq
1273 aa
AA seq
DB search
MAKIQAHSAAKQINQIQDKPYVITQKQVQQQHFQKLKVEDALSYLDQVKIRFANDPGIYN
KFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEVPKNGMAFLQSP
FSTQVSPGQQGKSLTPSVAATSSTASVVHAEAGPAQTSEVKAASSDSISSTPTGPPEPPS
RLSLPLTSRESQNQATSSSVSPPASETSPVEFDSAISYVNKIKNRFLDHPEIYRSFLEIL
HTYQKEQLEVKESRSSRGSSGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKRSLFTGS
SLTGGKEQVKKSEDEDMINKQNKKRPRPTLMHMSPLLKKKMRYSCTKDQSFASVGKHGVL
REFSFFDKVRRLFKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSF
LGDKELSHAVSGLSDRYMEGGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTALCKEV
LNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKL
SRLSPEDQDRFRLDDCLGGTSEVIQRRAVYRIYGDKAPEIIEGLKRSPATAVPVVLKRLK
AKEEEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIESIYDER
QEQSTEEGGVGHQGRNSSGSTSSSEPHMMFTYEDKQILEDAASLIIYHVKRQPTIHKDDK
DHIKRIIQHFVPDLFFARRGELSDTEEWTDEEAELEEGGERGGAAPSVAVGAAAGGNGNS
DNSSGGVVATGSQTQPQVALTHPLQQQQLQQQLNGEPRRRRCSPSQPGETEPSAIPGDMS
QPAGTTAPTPGSLPMETGSGVAGEKVDLRDPEAEHQKELDGVYNLFFVNNNWYFFLRLHQ
TLCSRLLRVYRQAEQQLLEHRAEQSRERLLMAEGRREKACDLAMELRLKQPSEVELEEYY
PAFLDMVRSLLDGNLDSTQYEDTLREMFTIHAYIGFTIDKVIHNIIRQLQHLVSDEVCLQ
VVDIYLGERKRGAAGGNLSSRCVRAAWETSYQWKSERIMAEENCFKVMFIQNKGQVTMTV
ELLDTEESQADDPLDVQCLSSYMEQFVGTESSLCSQAEGYFFKPVFLPRNLRRFRRWQVR
QVEAMRCRREWHRQLAVENAGSLDCRFKLNTHKMVFVMNSEDYMYRRGALVKARKSQHRV
ASNQHERFDKWHQGWLSTHVTASAERSVQNWLMGEEEEDFIPCKTTCMSTEVKGQTVNRY
QVHYSSSKAPSSP
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattcaggcgcacagcgccgcgaagcaaataaaccaaattcaagacaagcct
tacgttataacacaaaagcaagtgcagcagcagcacttccagaagctgaaggttgaagat
gccttgtcgtatctggatcaagtcaaaattcgttttgcaaatgacccaggaatatacaac
aagtttctcgacatcatgaaagagttcaagtctcagagcattgacacaccaggggttata
aaccgtgtgtctcaactctttcatggacaccctgacctggtcttgggcttcaatgccttc
ctgccacccggttatcggatagaggtcccaaagaatgggatggccttccttcagtctccg
ttctccacacaagtgtccccaggacagcagggcaagagcctgactccttcagttgcagca
acctccagtactgcttctgttgtccatgctgaagctggaccggcccagaccagtgaagtc
aaggcagcctcatcagattctatatcttcaactccaactggacctccagaaccccccagc
agactttctcttcccctgacgagcagagagagccagaatcaggccacctcctcatccgtt
tctccacctgcttcagagacgagtcctgttgagtttgacagtgccatcagctacgtaaac
aagattaaaaaccgtttcctcgaccacccagagatttataggtctttcctcgaaatactt
catacataccagaaagagcagcttgaggtgaaggagagtcgaagcagtcgaggcagcagt
gggatgaccgaggatgaggtcttttccaaagttgccagtctcttcaagggacaagaggac
ctacttgctgagtttggacagttcctgcctgatgccaagaggtcactgttcacagggagt
tcgctgactggagggaaagagcaagtgaaaaaatcagaggacgaggacatgattaacaaa
cagaacaaaaaaaggcccaggccaacactcatgcacatgtccccactgctaaagaaaaaa
atgaggtattcttgtaccaaagatcagtcctttgcttccgttggcaaacatggtgtctta
agagaattctccttctttgataaggttcgtcgcctgtttaaaagccaggaagtgtatgag
aactttctgcgctgcatcgccttgttcaaccaggaagtagtttcaggggccgagttgctg
caactagtgactccttttctggggaagtttcctgagctgtacacacagttcaagtcattt
ctgggggacaaagagctctctcatgctgtgtcagggctgtcggatcgttacatggaaggg
ggaggaggcagggaggtggattatgcttcttgcaagcgcctggggtccagctatagagca
ttgcccaaaacctatcagcagccaaaatgcagtgggcgcactgccctttgcaaagaagta
ttgaatgacacctgggtgtcattcccctcttggtcagaggactccacttttgttagctcc
aagaaaactccatacgaggaacagctgcatcgttgtgaggatgaaagatttgagttggat
gttgttctggagacaaacttggccaccatcagggtgttggagagcgtacagaagaagctg
tctcgcctgtcaccagaggaccaggacagattcagattagacgactgcctgggcggcacc
tccgaggtcatccagcgccgtgctgtgtatcgtatctatggcgacaaagctcctgagatc
attgagggactgaaaaggagtcccgccacggctgtgcctgtggtgctgaagagattaaaa
gccaaggaggaggagtggcgagaggcccagcagggtttcaataagatatggagagagcag
tatgagaaggcctacctgaagtccctcgaccaccaaggggtcaacttcaaacagaatgac
atgaaggccctgaggtccaagagtctcctcaatgagattgaaagcatctatgatgagcgt
caggagcagagcacagaagaaggtggtgttggccatcaaggtcgtaacagctctggctct
acctcatccagtgaacctcacatgatgtttacatatgaagacaagcagatccttgaagac
gctgcctccctcatcatctaccatgtcaaacgtcagcctaccatccataaggatgacaaa
gaccacatcaagcgtatcattcaacactttgttccggatctgttcttcgctcgccgcggt
gagctcagtgacacagaagaatggacagatgaggaggctgagctggaggaaggaggtgaa
agaggaggagctgcaccatctgtagctgtaggagcagcagcaggaggaaatggtaattca
gacaattcatctggaggagtagtggccacaggaagtcaaactcaaccacaggtggccctg
acccacccattgcagcagcaacaactacagcagcaactcaatggtgagcccagaagacga
cgctgcagcccatcacagcctggagaaaccgaaccctctgccatccctggtgacatgagc
cagcctgcagggactaccgcacccacaccaggctctttacccatggagactggctccggt
gtggctggggagaaagtggacctccgtgaccctgaagcagaacaccaaaaggagctggat
ggagtctacaaccttttttttgtcaacaacaactggtatttctttttgcggttgcaccaa
actctttgttcacgattgctgcgcgtttaccgacaagctgagcagcagctgctggagcac
cgagcagagcagagcagagagaggctgctgatggcagaaggaaggagggagaaggcgtgt
gacctggccatggagcttcgcctcaagcagcccagtgaggtggagctggaggagtactac
ccagccttcctggacatggtgcgcagtctcctggatggcaacctggactctacacagtat
gaagacacgctgagagaaatgttcaccatccacgcctacatcggattcactattgacaaa
gtcatccacaacattatcagacagctgcagcacctggtgagcgacgaggtgtgtctgcag
gtggttgatatttacctgggtgagagaaagcgaggggcagcaggtgggaacttgtcgtct
cggtgtgtcagagcggcatgggagacgagttaccagtggaaatctgaaaggatcatggct
gaagagaactgcttcaaagtgatgtttatccaaaacaaaggtcaggtgacaatgacggtt
gaactgctggacactgaggaatctcaggctgatgacccactagatgttcagtgcctgtcg
agctacatggagcagtttgtgggaacagagtccagtttgtgctcccaagcagagggttac
ttcttcaaacctgtgtttctgcccaggaacctgcgtcgcttccgtcgctggcaggtgcgg
caggtggaggcaatgcgctgcaggagggagtggcaccgacagctggctgtggaaaacgcc
ggcagtctggactgtcggtttaagctcaacacccataagatggtgtttgtcatgaactct
gaggactacatgtaccgccgaggcgcgctggttaaagcccgtaagtctcagcacagagtg
gcatcgaatcaacatgagcgctttgataaatggcatcaaggctggctgagcacccatgtc
acagcttcagctgaacgctctgtgcagaactggctgatgggtgaagaggaggaggacttc
atcccctgcaagactacctgcatgtccactgaggtgaaaggacaaacggtcaacagatac
caagttcattacagcagtagcaaagctccgtcctcgccgtaa
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