Nothobranchius furzeri (turquoise killifish): 107393220
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Entry
107393220 CDS
T05163
Name
(RefSeq) retinoic acid receptor RXR-gamma-B
KO
K08526
retinoid X receptor gamma
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03320
PPAR signaling pathway
nfu04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107393220
03320 PPAR signaling pathway
107393220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107393220
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
nfu03310
]
107393220
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
107393220
Nuclear receptors [BR:
nfu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
107393220
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
107393220
NCBI-ProteinID:
XP_015826922
UniProt:
A0A9D3BD65
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Position
sgr17:complement(27418456..27458484)
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AA seq
453 aa
AA seq
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MDSNDPYLHLNSAGPMSAGHTHHSSMGSMVGHPSVISTSRPLPSPMSTLGSPMNGLASPY
PVITSSLGSPSVPLQSTPNMNFGPLNSPQMNSMNSVSSSEDIKPPPGLQSLGNINYQCTS
PGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKECLIDKRQRNR
CQYCRYQKCLAMGMKREAVQEERQRGKERGENEVESTSSFNEDMPVDKILDAELAVEPRT
ETYSDGSPGNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELL
IASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGC
LRAIVLFNPDAKGLSNPSEVEALREKVYASLESYTKQKYPDQPGRFAKLLLRLPALRSIG
LKCLEHLFFFKLIGDTPIDTFLMEMLETPHQIT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaatgatccatatttacacctcaattcagcagggccaatgagtgcaggccac
actcatcattcctctatgggcagcatggtgggccacccctcagtcatcagcacttccagg
cccttaccgtcccccatgtccacccttggctcgccgatgaacggcctagcgtcaccgtat
cccgtcatcacctcatctctgggatcaccctctgtacctctgcagtctactcccaacatg
aactttggaccacttaacagtccacagatgaactctatgaacagcgtgagcagttcagag
gacatcaagcctccgccgggcctgcagtctctaggaaacatcaactaccaatgtacgagc
ccgggggggatgtccaaacacatatgtgctatatgtggcgatcgctcctcaggaaagcac
tatggtgtgtacagctgtgaaggctgcaaaggcttcttcaagcgaaccgtccgtaaagat
ctcacctacacgtgtcgagacaacaaagagtgcctgatagacaagcgccagaggaaccgc
tgccagtactgtcgctatcagaagtgcctggccatgggtatgaagagggaagctgtgcag
gaagagaggcagcgtgggaaggaacgtggggagaatgaggtggaatctaccagcagcttc
aatgaggacatgcctgtggacaagatcctggatgctgagctagctgtggagcccagaaca
gagacgtacagtgacggcagtcctggaaactcgaccaacgaccccgtcaccaacatctgc
caagcagcagacaagcagctcttcaccttagtggagtgggccaaaaggatcccccacttc
tctgaactccctctggatgatcaagtcatcttactacgagcaggctggaacgagctgctt
attgcatctttctcccaccgctcagtcacagttaaagacggcatcctgctggcgacgggt
cttcatgtccacagaagcagcgcccacagcgctggagtggggtccatctttgatagagtc
ctaacagagttagtatctaaaatgaaagacatgcagatggataaaacagaacttggctgc
ttacgagcaatcgtcctattcaacccagatgctaaaggtttgtcgaacccatctgaggtt
gaggcactaagagaaaaagtttacgcttcgctggagtcatacacaaaacagaagtaccca
gaccagccgggcaggtttgccaaactgctgcttcgcctgcctgctctgcgctccatcggc
ctcaagtgtctagagcatcttttcttcttcaagctaataggggacacacccattgacacc
ttcctgatggagatgctggagacgccacatcagatcacatga
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