Nothobranchius furzeri (turquoise killifish): 107393345
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Entry
107393345 CDS
T05163
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107393345
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107393345
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107393345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
zf-RING_UBOX
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
107393345
NCBI-ProteinID:
XP_015827121
UniProt:
A0A1A8UN40
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All DBs
Position
sgr02:complement(28368792..28393462)
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AA seq
713 aa
AA seq
DB search
MPIAAAGQPTTQAPRVCPRLPSTPEPVPKGADLFDEAGAAESPERTEVGRGLGGFGFNQS
GSRSFMQPGSTSISLPQSPVASSSYFLPHPHQMSMEPPRTRSRSRSGYYQQYGVGSSGVS
NHHHHQQQLQPQHGAGCAPLGAHSNPEHQQRPPGSNASPGIQRLPSVPGVHHIPVAGASG
GAYPCHPDHLYGEERDKSEESPSPKRQRLSSQSVLEQLTSTAPPPSTPSPPIRPWESGPQ
SRRQPHPHPLYQQERCLTPARLRRSPPARRQRGRLSRPSRQLAPQHHPSAQGLTPHPSPP
ELQDENYHHNPLPSALQPYPTHMPSTYSQPPTAGVGPEEPRAFHPPALSPQILHPAAHPH
PHHHHQQQQQQQQGAMVLDLHERLQHSSVPVSYTVSPVPPHGLAAPLCSSQPLPPSCSSQ
QQVPACSVVFSTGQHYHPMLQACSMHHLPVPYAFPSLLSSDPPFLISSSHLSHHPPHLPT
HAQFLPFQTPQARSPLQRIENEVDMVGEQLPVGGSFSYAHHHHHHHHHQPPSTLPPSTPL
HFLSHHDPLSQELFTVPYPHFMPRRFQNRRFRSPQTVPPSPYHPSFLPYFLSMLPVPPNV
APAISLELDVDDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTL
CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVQRDSE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgcagccgctggacagccaacaactcaggcgcccagagtttgcccccggctg
ccctccaccccggagcccgtccccaaaggggctgatttattcgacgaggcgggggcagcg
gaatcgccggagcgtacggaggtgggcagaggactcgggggcttcggtttcaaccaaagc
ggctcgagaagctttatgcagcccggatcgacctccatctctcttccgcagtccccggtc
gcgtcctcctcttattttctccctcatccccaccaaatgtccatggaacccccaaggact
cgatcgcgttcccggtctggatactaccaacagtacggtgttgggagcagcggagtatca
aaccaccaccaccaccagcagcagctacagcctcagcacggtgccgggtgcgcgccgctc
ggagctcacagcaatccggagcaccagcagcgaccaccaggaagcaacgcctcccccggg
atacagaggctcccctcggttccaggagtgcaccacatcccggtggcaggagcctccggt
ggagcctacccctgccaccctgaccacttgtatggagaggagcgcgataagagcgaggaa
agtcccagtccaaagcgccagaggctgtccagtcagtctgtcttagagcagctgacctca
acggcacccccgccttccaccccctctccccccatccgcccctgggagtcgggacctcag
agtcggcggcagcctcacccccacccgctctaccagcaggagcggtgcctgactcctgca
cggctcagacgcagtccaccagcgaggcgtcagcgcggccgcctctccagacctagccgc
caactcgctcctcaacaccacccctctgctcaaggactcacacctcacccgtctccacca
gagctccaggatgaaaactaccaccacaacccacttccctccgccctccagccctacccg
acacacatgccgagcacgtacagtcagcctcccacggccggagtgggtccggaagagccc
cgggccttccaccccccagctttgtcgcctcagatactgcacccagccgctcacccccat
ccccaccatcaccaccagcagcagcagcagcagcagcaaggagccatggtgctggacttg
catgagcggctgcagcacagcagcgtccccgtctcctacaccgtcagccccgtccctcct
cacggcctcgccgcacctctgtgtagcagccagcccctccccccgtcctgctcgtcgcag
cagcaggtccccgcctgcagcgtggtcttcagcaccggacagcactaccacccgatgtta
caggcgtgttccatgcaccatttgcccgttccttacgcttttccttccctgctgtccagc
gatcctcccttcctgatctcttcttcacatctgtcccaccacccgccccacctcccgaca
cacgctcagttcctgcctttccagacgccgcaggcacgatcgcctttacagagaattgaa
aacgaggtggacatggtgggggagcagcttcctgttggtgggagttttagctacgcccac
catcaccaccaccatcatcatcaccagcctccctccacgctgccgccctccacgccgctc
cacttcctctcccaccatgacccgctctcacaggagctcttcacagtgccatacccccac
tttatgcctcgccgattccagaaccgacgcttccgctcgccgcagaccgtgcctccttcc
ccatatcatcccagcttcctgccttacttcctatctatgcttcccgttcccccgaatgtg
gctcccgccatcagcctcgagctggatgtggacgatggagaggtggagaactacgaggcc
ctgctgaacctggctgagcgtctgggagaagccaaacctcgcggtttaaccaaggcggac
attgagcagcttccgtcgtaccgattcaaccccaacaaccatcagtctgagcaaacgcta
tgtgtcgtgtgcatgtgtgattttgagtcccgccagctcctcagagttctgccctgtaat
cacgaattccacgccaagtgtgtagacaagtggctgaaggccaaccggacctgccctatc
tgtcgagccgacgcctccgaggtccagcgggactctgagtga
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