Nothobranchius furzeri (turquoise killifish): 107393507
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Entry
107393507 CDS
T05163
Name
(RefSeq) catenin delta-1-like isoform X1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107393507
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
HEAT_2
ARMC9_ARM
Cnd1
Atx10homo_assoc
HEAT_EZ
Adaptin_N
ARM_UBP24_USP9X-Y
Motif
Other DBs
NCBI-GeneID:
107393507
NCBI-ProteinID:
XP_015827390
UniProt:
A0A1A8ADF5
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Position
sgr02:complement(28040923..28094853)
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AA seq
932 aa
AA seq
DB search
MEQCASTASLLASVREQERQFELLSRALEEERRSCAGTLPRPLPNMQNGRVLCDADIERL
TLNEGYVNGTYHFRMEPGHLVHESCTVEEQPQEPPFVSVDTREDGTTRHTETNVKKVIKT
TTTRTVIPSISDTLSMDGGGSVTGVGPYRQVPGVGVPMDYPTHTVPRNYHYGPPAGYDNY
RSGPPSEMYTSLNRGARMDDAYRPVHPDGYRTLDPSYRAPSRNQLDPYAAQPQVGRSEMS
TIQRFVPDPYGLEDDQRSIGFDEPDYGMSNPVHYSTVPRNHGGFPQGPPRRTGSYEGLLD
SGGDMYYWNRGAPLAQGERGSMASLDSTLRKGAPPGGWRQPELPEVIAMLNYRLDPVRSN
AAAYLQHLTYKNDKVKTDVRRMKGIPALVEMLDNPNREVHAAACGALKNISFGKDPDNKV
AIKNCDGVTALIRLLRKARDQELTDIITGTLWNLSSHDSVKMEIVDHALHALCDEVLVPH
SGWERGSNGAGGGEENCKPRHLEWEYSLTNTAGCLRNVSSERKEARRKMRECTGLVDSAM
YIVQSQIDCKEMDTKLVENCVCLLRNLSYHLYNEIPNAERYVDTTHNSRGAAPTGQKGSC
FGSRKAKDEWFSKGKKGEDPSQDQVDIPVRSTPAKGYELLFQPEVVHVYLSLLKEAKNPH
VLEASAGAIQNLCAGNWTYGRCIRGLVRKEKGLSMITELLNHENDRVVRAMSGALRNLAL
DARNRELEGQHSVAQLVANLPGGGQSQPVRALSEETVVSILSTLHEVLGTNIDAARIFRT
SQGVERLVLIHKDGNRSEREVRGAVLILKTLWAHKEIRRALQKDGWKKEDILVEVKPVDN
SNRPLGGYEESTLPLIDKGNKGDRDMIPMNDMGPDAYTTLDRNNTHESSDKDSVQGGMYG
ERQASLPLMDSYDEKLIVCLTRRPPPPTYCPC
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtgtgcgagcacggcctccctgctggcctcggtgcgggagcaggagaggcag
tttgagctgctgagccgagctctggaggaggagcggaggtcatgcgccggcaccttgccc
cgccccctccccaacatgcagaacggccgcgtactttgtgatgcagacatagagaggctg
acgctgaacgagggttacgtcaacgggacatatcacttcagaatggagcctggtcatttg
gtgcacgagtcgtgcacggtggaggagcagcctcaggagccacctttcgtctctgtggac
accagggaggacggaaccacacggcacacagaaaccaatgttaaaaaagtaataaagacc
accacaactcgtacagtcattccctccatatctgacacgctgtccatggatggtggaggg
tctgtgacaggtgtggggccctacaggcaggtccctggagttggcgtgccaatggattac
ccaacccacacggtgccccgcaactaccactatgggccgccagcaggctatgacaactac
cgctctggacctccgtctgagatgtacacaagcctgaacaggggcgctcgtatggatgat
gcgtacagaccggtccatccggatggctacagaactctggatcccagctacagagccccc
agcaggaatcagttggacccgtatgctgctcaaccacaagttggacgttcagagatgtcc
accatccagaggtttgtccctgacccgtacggtctggaggacgatcagcgcagcattggc
tttgatgagcccgactatggcatgagtaacccggtgcactacagcaccgtgcctcgaaac
catggtggtttccctcaagggcccccgcgcaggaccgggagttacgaaggccttttggac
tcagggggagacatgtactactggaacaggggggcaccgctggctcaaggggagaggggc
agcatggcgtcactggacagcactctgaggaaaggtgcccctcctggtggttggcgtcag
ccggagctgccagaggtcatcgccatgctgaactacaggcttgaccccgtcaggagcaat
gcagctgcgtacctgcagcatctcacctataagaacgacaaggtgaagactgacgttcgt
cgaatgaaaggcattcctgcgctggtggagatgctcgacaaccctaacagagaggttcac
gccgcagcttgtggagctctgaagaacatttcttttggcaaagatccagacaataaagtt
gccattaagaactgtgatggagttactgccctcatccggctgctgaggaaggcccgagac
caggaactcacagacatcatcacagggacgttgtggaacctgtcgtcccacgactctgtg
aagatggagattgtggatcatgcgctgcacgccctctgcgacgaggtactggtgccccat
tcaggctgggagcgagggtccaacggggcaggaggcggcgaggaaaactgcaagcctagg
catctggagtgggaatattcgctcaccaatacagccggctgtctgagaaatgtgagttca
gagagaaaggaagcaaggaggaagatgagggagtgcacaggattggttgattctgccatg
tacatcgtccagtcccagattgactgtaaagaaatggacactaagctggtggagaactgt
gtttgtctgctgaggaacttgtcttatcacctgtacaacgaaatccccaacgctgagcga
tacgtggacaccacgcacaacagcaggggcgccgcccccaccggccagaagggcagctgc
ttcggctcccgcaaggccaaagacgagtggttttctaaagggaagaaaggcgaagatcct
tctcaggatcaagtcgatattccagtgaggtccacacctgctaaaggctatgagctgctg
ttccagccagaggtggtccacgtctacctgtcgctgctgaaggaggccaagaacccgcat
gtcctggaagcgtcagctggagcgattcagaacctgtgtgctgggaactggacttatgga
cgatgcatccggggtttggtgcgcaaagaaaagggcctgtctatgataaccgagctgctg
aaccacgaaaatgaccgagtagtccgagccatgtccggagccctccgtaaccttgcccta
gacgcccgtaacagggaactagaaggtcaacattcggtagctcagctggtggcgaatcta
ccaggcggtggtcagagtcagccggtgcgagcgctgtcggaagagacggttgtgtctata
ctgagcacgctccacgaggtgctgggcaccaacatcgatgcagccagaatcttcaggacc
tcgcaaggagtcgagagactggttctcatccataaggacggtaaccggtcggagcgggaa
gtccgtggagccgttctgattctgaagaccctctgggcccataaggagatccgtcgggct
ctgcagaaggacggctggaagaaggaggacatcctggtggaagtgaaacctgtcgataac
agcaacaggccccttggaggatatgaggagagcaccctcccacttatagacaaaggcaac
aaaggtgaccgggacatgattccaatgaatgatatgggaccagacgcctacaccacactg
gaccggaacaacactcatgagtcttctgacaaggattcagttcagggagggatgtatggg
gagaggcaggcttccttgcctctgatggattcttacgatgaaaaactgatcgtttgcctc
acaagacgaccgcctcctcccacttactgcccttgctga
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