Nothobranchius furzeri (turquoise killifish): 107393577
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Entry
107393577 CDS
T05163
Symbol
msi1
Name
(RefSeq) RNA-binding protein Musashi homolog 1
KO
K14411
RNA-binding protein Musashi
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107393577 (msi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107393577 (msi1)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107393577 (msi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107393577
NCBI-ProteinID:
XP_015827522
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All DBs
Position
sgr18:8522406..8541493
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AA seq
347 aa
AA seq
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METEGSQSSLSASDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFMDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRTRVMPYGMDAFMLGIGMLGYPGFQTATYTSRSYAGITPGYT
YQFPEFHLERTPLLTTSHPPELAAIPLTAYGPMAAAAAAVVRGSTPSRTAGFLGTSSPGP
MADLYAAANQDSGVSGYISAVSPAPSTGFGHGLGGTHTANTHTNGYH
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaagggagccagagcagcctgtccgcctcggactccccccacgacccttgc
aaaatgttcataggaggactcagttggcaaacaacacaagagggtctgaaggagtacttc
tgcaagtacggcgaggtgaaagagtgtatggtgatgcgagatccggttactaagcgctcg
aggggctttggattcgtcacctttatggatcaggcgggcgtggataaagttttggcccaa
accagacatgagttggactcaaaaacaatcgatccgaaagtggcgtttcctcgacgagcc
caacctaaactggtgactcgaactaagaagatctttgtgggcggcctgtcggtgaacacg
accattgaagacgtgaagcagtactttgaccagtttgggaaggtcgacgatgccatgctc
atgttcgacaagaccacaaacagacacagaggtttcggctttgtgacctttgagaacgag
gacgtggtggagaaagtttgtgagatccacttccacgagatcaacaacaaaatggtggag
tgtaagaaagctcagcccaaggaggtgatgtcccccaccggctctgcccggggacgcact
cgggtgatgccctatgggatggacgcctttatgctgggcattggaatgctgggttatccg
ggcttccagacggccacttacaccagccggagctacgcaggcatcactccgggatacacc
tatcagttcccagagttccacttagagcggaccccacttctgacaacatcccaccccccc
gaactggcagccattcccctcactgcttacggaccaatggcagctgcagcagcagcagta
gtcagaggctccactccgtcacgcacagctggcttcctgggcaccagcagccccggacca
atggccgacctgtatgctgcagccaatcaggactcaggagttagcggctacatcagtgca
gttagccccgccccctctacagggtttggtcacggtttagggggaactcacacagcaaac
acacacactaatggctaccactga
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