Nothobranchius furzeri (turquoise killifish): 107393608
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Entry
107393608 CDS
T05163
Symbol
lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107393608 (lgi3)
Membrane trafficking [BR:
nfu04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
107393608 (lgi3)
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRRCT
LRR_1
LRR_9
LRR_14
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
107393608
NCBI-ProteinID:
XP_015827574
UniProt:
A0A8C6Q0R2
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All DBs
Position
sgr18:9630977..9638302
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AA seq
548 aa
AA seq
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MLEFRPKWMRLLCLWVLCLCLCLPSGSHARRSPKVPRCPATCSCTKDSAFCVDTKAIPKS
FPPGIISLTMVNAAFTTIPEGAFSHLHLLQFLLLNSNTFTMVADDAFAGLSHLQYLFVEN
NDIQALSKYTFRGLKSLTHLSLSNNNLQQLPRDLFKHLDILTDLDLRGNLFRCDCKIKWL
VDWMEKTNTSVPAIYCASPFEFQGRRIHDLTPRDFNCISADFAVYETFPFHSVSVESYDF
SGDQFVVFAQPDSGFCTLYIWDHVELAFRRFHNITSRSAVYCKPVVINNTLYMVVAQLFG
GSHIYKWEEGPQRFIKIQDIDTSRVRKPNFVETFQLDGEWYFIVADSSKAGSTSIYRWNS
NGFYSHQSLHPWHRDTHVEFLDVSGKPHLILSSASQPPVVYQWNRNQKQFAFQSQITELA
DVQMVKHFWVRRVLYLCLTRFIGDSKILRWEGQRFVEVQTLPSRGSMAVYPFTVGQRQYL
ILGSDFSFSRVYLWDDLTQRFQPFQELNMRAPRGFNLVSVDNKDVLLAASFKGNTLAYQH
LVVDLSAK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgctggagttcaggccaaaatggatgaggctgctgtgtttgtgggttctgtgtctgtgt
ctctgcctgccgagtggatcacacgccaggagatccccaaaggtaccccgctgccctgca
acctgctcctgcaccaaagacagcgccttctgcgtggataccaaggcgattcctaagagc
ttccctcctggaatcatctctctgacgatggtgaacgcagcgttcacaacaatccctgag
ggagctttctcacacctccacctgctacagttcctgcttttaaactccaacacgttcacc
atggtggctgatgatgcctttgctggtctgtctcatctgcagtatttgttcgttgagaat
aatgacatccaggctttgtcaaagtatacgttcagagggctcaaatccctgactcatcta
tcgctctcaaacaacaacctgcagcagctgcccagagatctcttcaaacatctggacatc
ctcactgatctagacctgcgtgggaacttgttccgctgcgactgtaagatcaaatggttg
gtagactggatggagaagaccaacacgtcggttcctgccatctactgtgctagccctttt
gaatttcagggacgcagaattcatgacctcacaccacgggacttcaactgcatcagtgca
gattttgctgtttatgagaccttccctttccactctgtgtcagtggagtcgtatgacttc
agcggagatcagtttgtggtttttgctcagcctgactcaggtttctgcaccctctacata
tgggatcacgtagagctggccttcaggaggtttcacaacatcacatctcgttctgctgtt
tactgtaaaccagtggtgataaacaacacactctacatggttgttgctcaactctttggt
ggatctcacatttacaagtgggaggaggggccacagcgcttcataaagatccaagacatt
gacaccagccgggtgaggaaaccaaacttcgtggagacctttcagctggatggagagtgg
tatttcattgtagcagacagttccaaggctggctctaccagcatctatcgctggaacagc
aacggtttctactcccaccagtccctccacccctggcatcgagacacccacgtggagttc
ctggatgtcagtggaaagcctcatctcatcctctccagtgcctcccagccaccggtggtg
taccagtggaaccggaaccagaagcagtttgctttccagtcccagatcacagagctagct
gatgtccagatggtgaagcacttttgggtgaggcgggttctctacctctgcctcactcgc
ttcattggagactccaagatcctccgctgggaagggcagcgattcgtggaggtccagact
ctgccctctcgagggtcaatggccgtgtatcccttcacagtgggccaacgtcagtacctc
attctgggaagtgacttctccttctctagagtctacctgtgggatgacctcacccagcgc
tttcagcccttccaggagctgaacatgagagcccccagggggttcaacttggtgtctgtg
gacaataaggacgttctgcttgctgccagtttcaaaggcaatactctggcctaccagcac
ctggttgtggatctcagtgccaaatga
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