Nothobranchius furzeri (turquoise killifish): 107393646
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Entry
107393646 CDS
T05163
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107393646 (gapvd1)
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107393646 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
107393646
NCBI-ProteinID:
XP_015827649
UniProt:
A0A8C6VN83
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All DBs
Position
sgr18:complement(11849813..11889660)
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AA seq
1477 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYISSEKQLIQRLNSDVLKTAERLYHAAWIAKQQRINLDRLIL
TSAEASPAECCQHAKMLEDTQFIDGYKILGFQETIYGEFLARLRENPRLVASCLVAGERL
NQEHTQGVIHTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPSKVTERLTPAQRERFGEKGSE
DYRQRVQTAVEANEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAVVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDADPR
RKSSLSKFDKGCVAAFLDVVIGGRAVETPPMSSMDLLEGLSRTAVYITHNQLLALVDFVR
SVMAGDHLREEEHMALETLLANVPQSRTVKSNSLELTPSNTPQLSPATTPANKKNRLPIG
QHLAAITSWDPTASTLSAHIPLVTPFAAARSRSRTNISQEVEPEPGSQESLQELVPEEVL
VISLGTGPQTVPGMMSENEVLNLQMGDGAQGDGSADDAKMHGKPDKTLRFSLCSDNLEGI
SEGPSNRSNSVSSLDLEAESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEI
RDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAESMLGSLLCLPGSS
SVLLDPYGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGVGSTSDDTEVREV
SSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEESTHGSHHLTS
PPSQAESLLAMFDPLSSGEGSSTGTIVRPKVHYPRPNHPPPDPPIPEASALGPETRHSLF
TPHCLAQCELEHMKQRHSFPDRLVRSRSSDIVCPGRRPTSDPGLNRRVAVEERDPAGAFP
SGPSSSPSKDSLKGEMEDRKDSDDEKSDRNRPWWKKPFSSAIPKVLYWTAESDVTAPITA
FRKKDKHDKDKTPQEQVPQDEPSQSHQAQAAEDILDKYRNIKSTSPSNDPPPKERPEDVD
ESIPPREDPSHNISIDDLPDSASQTAQQHYSKFSFSDAKKKLRLALCSADSVALPIMASA
TTCNGLPDHMDPEDNEIVCFLKVQLAEAINLQDKNQIAQIQETTRCVSRFDARTCRKLLA
AIADDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKVVANRYFTTVCVRLLLEHM
ESKMLDFIKAFQGCTAADDKTAAVEDFLRYLYGAMARDAIWQYASEDQLQDAQMAIERSV
MNRIFKLAFYPNQDGDILRDQLFYEHIHRLSKVVTANHKALQIPEVYLKEAPWPSAQSEI
RSINAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIRANPPCLLST
VQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagatatccacactctggcccaccacctaaagcaggagcggctctacatc
tcgtcagagaagcagctgatccagaggctcaacagtgacgtgctgaagactgctgaaagg
ttgtatcatgctgcctggatcgccaagcagcagaggatcaacctcgatcggctcattctc
accagtgcggaggcctcccccgctgagtgctgccaacatgccaaaatgctggaagacaca
cagtttattgatggatacaagattctcgggttccaggaaacaatctatggtgagttcctg
gccaggttgagggaaaatcccagactggtcgcatcctgcctcgtggcaggagagagactg
aaccaggagcacacccaaggagtcatccatacggtcttcacctcactctatggcaactgc
atcatgcaggaggatgagagttaccttctgcaggtgttgaggtacctggtagagtttgag
cttaaggagagtgataacccgcgccgtctcctccgacggggaacctgcgccttcagcatc
cttttcaagctgttctctgagggcctgtactccgccaaactcttcctcactgccaccctt
catgaacccatcatgcagctgctggtggaggatgaggaccacctggagaccgacccgtcc
aaggtgacggagcgccttactccagcccagcgcgaacgctttggagagaaagggtctgag
gactacaggcagcgagtgcagacagctgttgaagccaacgaagccaaactcgttgctctg
gtgaacaagtttattggctacttaaaacaaaacacctactgctttcctcacagcctgcgc
tggatcgtgtcccagatgtataagactttatcatgcgtggagcgccttgaggtgggtgag
gtgcgcaccatgtgtacagacctcctcctgacctgcttcatttgcccggctgtagtcaac
ccggagcagtacggtataatctcagacgcacccatcaacgaggttgctcgcttcaatcta
atgcaggtggggcaacttttgcagcagttggccatggctgatgatgatgcagacccaagg
aggaagagcagtttgtctaagtttgataagggttgtgttgctgcctttttggatgtggtg
attggaggaagagcggtcgagaccccccctatgtcttcaatggaccttctggaaggcctc
agtaggactgctgtctacattactcataatcagctgctggccctggtggactttgttcgg
agtgtgatggcaggagaccacctacgggaggaggagcacatggccctggagaccctgctg
gccaacgtgcctcagtctcgtactgtaaagagcaacagcctagaactgactccctccaac
accccccagctctcccccgctaccaccccagccaacaagaagaacagactacccatagga
caacatttagctgctataacatcctgggaccccacagcctccactttgtctgctcacatt
ccgttagtaaccccttttgcagctgctcgcagccgcagccgtaccaacatatcccaggag
gtggagccagagcccggctcccaggagtccctccaagagctggtgccagaggaggtgctt
gtgatttcactgggaaccggccctcagactgtccccgggatgatgtcagagaatgaggtt
ttgaacttgcagatgggcgatggggcccagggggacggctctgccgatgatgctaagatg
cacgggaaaccagacaaaaccctgcgcttctctctgtgcagtgacaacttggaaggaatc
tcagagggaccgtccaaccgttccaactctgtgtcctctctggatctggaggcggagtct
gtttccgagctgggagctgggccctccgggagcaatggggttgaggctctgcagcttttg
gagcacgaacaggccaccacacaggacaacctggatgacaaactgcggaagtttgagatc
agagatatgatgggtctgacagatgaccgtgacatctctgagacggtcagtgaaacctgg
agcactgacgtgctcggcagtgactttgacccaaatatggatgaagatcgactgcaagaa
atagcaggggcagctgcagagagcatgcttgggagcctgctgtgccttcctggctccagt
tcagttctgctggacccctacggctccaccatctcggagactacgagcgaagcctggagc
gtggaggtccttcccagtgactcagaagctccagatctgaagcaggaggaacgtctgcag
gagctggaaagctgctcgggagttggtagtacctcagatgacacggaggtccgcgaggtc
agctctagacccagcacacctggcctcagcgtcgtctcgggtatcagtgccacatcagaa
gacatccctaacaagattgaggacttgcggtcagagtgcagctcagattttggtgggaag
gactctgtgaccagtccagatggggaggagtcaacccacggatcccaccatctgacatct
ccaccttctcaggctgaatccttactagccatgtttgatcccctctcctcaggtgaaggc
tcctccactgggacaatagtcaggcccaaggtgcactatcccaggcccaatcaccctcct
cctgaccctcccattcctgaagccagtgccctggggccagagacacgccactctctgttc
acgcctcactgcttggcccagtgcgagctggagcacatgaagcagcgccactccttcccc
gacaggctggtgcgcagccgcagctccgacatcgtgtgccctggccgccggcccacaagt
gatcccggcctcaacaggcgggtggcagtcgaagagcgtgaccctgccggggcctttccc
tcaggaccctcctcatcacccagcaaggactccctgaaaggagagatggaggacaggaaa
gacagtgatgacgagaagtccgatcgcaaccgaccgtggtggaagaaacctttctcttca
gctattcccaaagtgctgtattggacggctgagagtgatgtcacagctccgatcacagcg
tttaggaaaaaggacaaacacgataaagataaaacgcctcaggagcaagttccacaagat
gagcccagtcagagccaccaggcccaggcagcggaggacatcctggacaagtacaggaac
atcaaaagtaccagcccgagcaacgaccccccacccaaagagagaccagaagatgttgat
gaaagcatccctcctagagaagacccctcacacaacatttccatagatgaccttcctgac
tccgccagccagacagcacagcaacattattccaagttctctttcagtgatgcaaagaag
aagctgaggttggctctatgttctgcagactctgtggccctccccatcatggcatcggcg
accacatgcaacgggctgcctgatcacatggatcctgaggacaatgagatcgtctgtttc
ctgaaggtccagctagctgaagccatcaacctccaggataagaaccagatcgctcagatc
caggagaccacgcgctgcgtcagccgcttcgatgcacgcacctgcaggaagctgctggct
gccattgcagatgattatagaaagcgggctccatacatagcttacctcaccaggtgtcgc
cagggcctgcagacctctcaggcccacctggagaggctcctacagagggtgctgagagac
aaggtggtggccaatcgctacttcaccactgtttgtgttcggctccttcttgaacatatg
gagtcaaagatgctcgactttattaaagcgttccaggggtgcacggcagctgatgacaag
actgcagcagtggaggattttcttcgctacttgtacggcgccatggcccgtgatgccatt
tggcagtatgcgagtgaggaccagctgcaggatgcccagatggccatcgagcgcagcgtt
atgaaccgcatcttcaagctggccttctaccccaatcaggatggagatattctcagagac
cagcttttctatgaacacatccatcggctctcaaaagttgtcacagcaaaccacaaagct
cttcaaatcccagaggtctacctgaaggaagctccatggccttctgctcagtctgagatt
aggagcatcaacgcttacaagaccccgcgagacaaagtccagtgtattctacgaatgtgt
tccaccatcatgaatcttctcagtttagccaacgaagactcggtgccaggagcagatgac
tttgtccctgttcttgtctttgtcctcataagggcaaacccgccctgcctgctgtccacc
gttcagtacatcaataatttctacgccagccggctgagtggggaggagtgctattggtgg
atgcagttcaccgcggcggtggaattcattaagaccatcgacgatcgcaagtga
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