Nothobranchius furzeri (turquoise killifish): 107393702
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Entry
107393702 CDS
T05163
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03015
mRNA surveillance pathway
nfu04261
Adrenergic signaling in cardiomyocytes
nfu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107393702
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107393702
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
107393702
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nfu01009
]
107393702
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107393702
03036 Chromosome and associated proteins [BR:
nfu03036
]
107393702
Protein phosphatases and associated proteins [BR:
nfu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107393702
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107393702
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107393702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
VPS11_N
Motif
Other DBs
NCBI-GeneID:
107393702
NCBI-ProteinID:
XP_015827737
UniProt:
A0A8C6PJE3
LinkDB
All DBs
Position
sgr18:complement(12999278..13017254)
Genome browser
AA seq
448 aa
AA seq
DB search
MAGPGGGSSDVQWYFSQVKGAMDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEP
ESKNQAQCRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI
KLWKISERDKRAEGYNLKEEDGRYRDPNSVTTLRVPVLRPMDLMVEASPRRVFANAHTYH
INSISVNSDHETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNQC
NTFVYSSSKGTIRLCDMRASALCDRHTKLFEEPEDPNNRSFFSEIISSISDVKFSHSGRY
MMTRDYLSVKVWDLNMETRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMT
GSYNNFFRMFDRGYRQDMTFEASRENSKPQSVLKPRKVSTGGKRKKDEISVDSLDFNKKI
LHTAWHPLDNIIAVATINNLYIFENKMN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacccggtggtgggagcagcgatgtgcagtggtacttctcccaggtcaaaggc
gcgatggacgatgatgtagcagaagctgacatcatatctactgttgaattcaatcactct
ggtgagctgcttgccactggtgacaagggggggcgtgttgtcatctttcaacaggagcca
gagagtaagaatcaggcacagtgcagaggagagtacaatgtttacagcaccttccagagc
cacgagcccgagtttgactatttgaaaagtcttgagatcgaggagaagatcaacaagatt
cgatggttacctcagaagaatgctgcacagtttcttttatcaacaaatgataaaactata
aaactgtggaaaatcagtgagcgtgacaagagagcagagggctataatttaaaagaagag
gacgggcgatacagagatcccaattctgtcacaacactacgggtaccggtgctgcggccc
atggatctgatggtggaagccagtcccagacgagtgtttgcaaatgctcacacctatcac
atcaactccatatcagtaaacagtgatcatgagacctatttgtctgcagatgacttgcgc
attaacctttggcacttggagatcaccgatcgcagctttaatattgttgacattaaacct
gccaacatggaggagctgacagaagtgatcacagcggcggagttccaccctaaccagtgc
aacacctttgtttacagcagcagcaagggaaccatccgtttgtgtgacatgagggcatca
gctctgtgtgacagacacacaaaattgtttgaggagcctgaagatccaaacaaccgttcg
ttcttttctgagatcatctcatccatctctgatgtgaagttcagccacagcgggcgctac
atgatgacacgtgactacttgtcggtcaaagtttgggatctcaacatggaaacgcgacca
gtagagacatatcaggtgcatgaatatctcaggagtaagttgtgttcactttatgagaac
gactgcatctttgacaagtttgaatgctgttggaatggaaatgacagcgttgtgatgacg
ggctcctacaacaacttcttcagaatgttcgacagaggctacaggcaggacatgaccttc
gaggcctcgcgggaaaacagcaagccacagtcggtcctgaagcctcgcaaagtaagcaca
ggtgggaaacgcaaaaaggacgagatcagtgtagacagtttggactttaacaagaagatc
cttcacactgcttggcatcctctggacaacatcattgctgtggccaccatcaacaatctt
tacatctttgagaataagatgaactag
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