Nothobranchius furzeri (turquoise killifish): 107393768
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Entry
107393768 CDS
T05163
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04514
Cell adhesion molecules
nfu04810
Regulation of actin cytoskeleton
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107393768
04514 Cell adhesion molecules
107393768
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107393768
09142 Cell motility
04820 Cytoskeleton in muscle cells
107393768
04810 Regulation of actin cytoskeleton
107393768
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nfu04515
]
107393768
Cell adhesion molecules [BR:
nfu04515
]
Integrins
Integrin alpha subunits
107393768
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
107393768
NCBI-ProteinID:
XP_015827856
UniProt:
A0A1A8V5X1
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Position
sgr18:complement(16885798..16902236)
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AA seq
1087 aa
AA seq
DB search
MRSLCALDSRTNVSPALWKLHFRSDLGRSRCWRMERVRDRASSAGMFVLAALCLAPNGVW
SFNLYAEHPTVYRGPDGSYFGYSVDFYQASTDRNTVSVLVGAPRANTSQPGIVEAGAVYY
CPWPGLPESCRQIPFDNSNNRMIKVNGTREPLEFKSHQWFGASVRTHKGNVVACAPLYRW
RTVKRDGEKDPVGTCYVAVQNFSAYAEYSPCRTSDPDPEGQGFCQAGFSVDFTKDGRLVV
GGPGSFYWQGQVMTAGVAEILNGYSLKAVLRRVAGEKQTVMAEDTNDDSYLGYSVAVGEF
TGDSAQELIAGVPRGAHSFGYVAMIDSTNLTFIQNFTGEQMASYFGYSVAVSDLNGDGTD
DIMVGAPLYMERETETKPREVGRVYLYLQLAPLTFSTPVALNGTYTFGRFGSAVAPLGDI
NQDGFNDVAVGCPFGGEDHGGRVLIFNGNRDVSTNALTLSQELRAARSSGGSLAGYGFTL
RGGHDLDRNEYPDLIVGAFGASEVSVYRSRAVVSVEATLTLTPRILNPDDRQCFLPQTEN
RVTCLKVDVCAAVSGVGIPDSVDLRADLQLDWLKGIRGGVKRVLFLDTQQPQRMGLLRLG
HSRPRACLGYTIYLKEDDEFRDKLTPISLALNYSLTPPTFDQTLPPVLNQYSSTFLQEQA
YILLDCGDDNVCIPDLQLSASMDRTELVIGDDNLVMLTITAVNRGEGAYETELHTLIPPE
ADYIGVERRLESLLQLNCEYKTINESRMVVCDLGNPMVARTELAVGLRFSVQRLEDAGPK
ISFELQIHSSNKDNSSSNLVTMNMSITASAQLDLRGVSHPSQVVLPFPNWQPKEKPVKED
DVGPQVTHIYELHNFGPSSIGEAELQVGWPSRYHDENLLYAMEIETDGPISCRTNTSLNP
HGLQTSTLQDTPELLGFLRNRSDPPPLHRSRRSVSTAESFSTKTLNCSNLSCLKIMCTVG
RLDRGRSAVIKIRSRLWAHTVLQWRNDPYSLNSTVSFLVLSVPYLVQPPTSSQLRASIGT
LVLWGTPDVSFAVPLWVIILAILLGLLVLAILTLAMWKCGFFDRARPPADDDVSDQEKLT
SDQTGDA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcactttgcgctcttgactccaggacgaacgtctcacccgcactttggaagctc
cactttcgctcagatctgggaaggtcgcgctgctggaggatggagcgtgtgcgggatcgc
gcctcctctgctgggatgtttgtgctcgctgcgctctgcctggcgccaaacggagtctgg
agttttaacctttacgcagagcatcccacggtttacagaggacccgatgggagttatttc
gggtattctgtggacttctatcaagcttctaccgacaggaacacggtcagcgtgctggtg
ggggctcctagagccaacacctcccagccaggcatcgtggaggctggggccgtctattac
tgcccctggcccgggctccccgagagctgcagacagattccctttgacaactccaataac
agaatgatcaaagtgaacggcaccagagagcctttggagttcaagtcccaccagtggttt
ggagcttcagtcagaacacacaagggaaacgtggtggcgtgtgctcctctctaccgctgg
aggacggtgaagagagacggggagaaggaccccgtggggacctgctatgtggccgtccag
aacttcagcgcctatgcagaatactcgccgtgcagaaccagtgatccggatccagagggg
cagggcttctgtcaggcgggcttcagcgtggacttcaccaaggacgggcggctggttgta
ggaggaccaggaagcttctactggcaaggccaggtgatgacagcaggggtagctgagata
ctgaacggctactccttgaaggcggtgctgagacgagttgccggagagaaacaaaccgta
atggcggaagacacgaacgatgacagttaccttgggtattcggtggcagtgggagagttt
acgggagactcagcacaagagctgatagctggagtcccaagaggagcacacagctttgga
tacgtggcgatgatcgactccaccaatctgaccttcatccagaacttcacaggagagcag
atggcgtcctactttggctactcggtggctgtgtccgacctcaacggagacgggacggat
gacatcatggttggagcgcccctgtacatggagagggagacggagaccaaacccagggag
gtggggagggtttacctgtacctgcagctggctccgctcaccttctccacacctgtggct
ctgaacggcacctacacgttcggacgcttcgggtcggcagtagcaccgctgggagacatc
aaccaggatggatttaatgacgtggcggtgggatgtccattcggaggcgaggaccatgga
ggcagagtattgatctttaacggtaacagagacgtttccactaacgctctgacgctgagc
caggagctccgggccgcccgctcctccggtggaagcttggctggatacggattcaccctg
agaggaggccacgacctggacaggaacgaatatcctgatctgatcgttggggcgtttgga
gcgagtgaggtctccgtctacaggtctcgagctgttgtgtctgtggaagcaacgctgact
ctaactcccagaatcctgaatcccgatgaccgacagtgtttcctccctcagacagaaaac
agggtcacctgcctgaaagtggacgtgtgtgcggcggtgagcggcgtcgggatccccgac
tctgtagatctgagggcagacctgcagctggattggctcaaaggtatcaggggtggagtt
aagagagttctcttcctggatacccagcagcctcagcgcatgggactcctgaggctcggt
cacagccgcccacgcgcgtgtctgggctacaccatctacctgaaggaggacgatgagttc
agggacaaactgactcccatctcactggccctaaactacagcctgactccgcctactttt
gaccaaacactcccacctgttctcaaccagtacagcagcaccttcctgcaggagcaggct
tacatcctcctggactgcggcgacgacaacgtctgcatccctgacctccagctctctgcc
agcatggatcgcaccgagctggtgattggagatgacaacctggtcatgctgaccatcact
gcggtaaaccgaggagagggggcctacgagacggagctgcacacgctgattccaccggag
gcggactacatcggagtggagcgcaggctggagtccctcttgcagctaaactgcgagtac
aagacgatcaacgagagcaggatggtggtctgtgacctcgggaacccgatggtggcgagg
acggagctggctgttggtctgaggttttcggtacaaaggttggaggatgccggaccaaag
atcagctttgagctacagatccacagctccaacaaagacaactccagcagtaacctggtc
accatgaacatgtccatcaccgccagcgcacagctcgatctgcggggggtgtctcatccc
tctcaggtggtgctgccgtttccaaactggcaacctaaagagaagccagtgaaagaggac
gacgttggaccacaagtaacacacatctatgagcttcataacttcggtcccagcagtatc
ggtgaggctgagcttcaggtgggctggccctcccgataccatgacgagaacctgctgtat
gccatggagattgaaaccgacggcccaattagctgccggacaaacaccagcctgaatcca
catggcctccagacctccactctgcaggacaccccagagctgctgggcttcctgaggaac
cgcagcgatcctcctcctcttcaccggagcagacgatccgtcagcactgctgagagcttc
agcactaagacgctgaactgctccaacctctcctgcctgaagatcatgtgcacggttggc
cggctggatcgaggccggagcgctgtgattaagatccggtccaggctgtgggctcacacc
gtcctacagtggcgcaacgatccgtacagcctcaactctaccgtgtccttcctggtcctg
tcagtgccctacctcgtccaaccccccacctcatcgcagctccgggcctcaatcgggact
ctggtgctgtgggggactcctgacgtgtcttttgctgttcctctttgggtcatcatcctg
gccatcctgctgggcctgctggttctggccatactcacgttagccatgtggaagtgcggg
ttcttcgaccgggcgcggcctccagcagacgacgacgtctcagaccaggagaagctaacg
tctgatcagacgggagacgcctga
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