Nothobranchius furzeri (turquoise killifish): 107393914
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Entry
107393914 CDS
T05163
Symbol
thbs4
Name
(RefSeq) thrombospondin-4
KO
K04659
thrombospondin 2/3/4/5
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04145
Phagosome
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107393914 (thbs4)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107393914 (thbs4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
107393914 (thbs4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107393914 (thbs4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107393914 (thbs4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107393914 (thbs4)
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107393914 (thbs4)
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Phagocytosis
Opsonins
107393914 (thbs4)
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107393914 (thbs4)
Exosomal proteins of colorectal cancer cells
107393914 (thbs4)
Exosomal proteins of bladder cancer cells
107393914 (thbs4)
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107393914 (thbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_3
cEGF
Laminin_G_2
DcpS_C
RAP80_UIM
Motif
Other DBs
NCBI-GeneID:
107393914
NCBI-ProteinID:
XP_015828029
UniProt:
A0A8C6PKB8
LinkDB
All DBs
Position
sgr18:20724854..20734240
Genome browser
AA seq
953 aa
AA seq
DB search
MMTGMCVRAAALVLVLQQLVLIITAQGIVYDLLVSPDCLPDLLQGSLKNKGRDEAFLLSS
FRLQNKAPTSLFSVINPKDNNKYLELSVQAKLSKVTLRYQKTDGRFGTTSFNHAALADGR
EHHVMLHARGLQRGPPRLNIYVDCRLAHTLNDLPAAFGSLQPGPNKVALRTLQSSGQNEL
TDLKLVIEDTIDNVATLQDCSVEPAESLHLLGIQGGGGVQDQTTTQELKNMLTEMRELLN
QQIKETNFLRNTIAECLACGLEGRPSDPDPAPSPGQVILQPQPLTQCPPGTCFRQNMCIR
SESGGFTCAPCPDGYTGDGVHCDDVDECKFNPCFPGVRCVNTAPGFLCEKCPLGYSGPQI
NGVGVSYAKSHKQVCNDLDECLSPPESGGCTANSHCYNTVGSFRCGECKAGFTGDQVRGC
HGTRLCPNGQPSPCDINGECIVERDGSISCVCGVGMAGNGYVCGKDTDIDAYPDNNLQCR
DNTCNKDNCMFVPNSGQEDADRDGTGDACDDDADNDSIINIDDNCWLVPNVDQRNSDKDV
HGDACDNCRTMENPSQRDTDQDGLGDECDDDMDGDGLKNFLDNCQRVPNPDQRDRDSDGV
GDACDSCPDMPNPNQSDSDDDLVGDTCDDNIDSDGDGHQNTKDNCPTVINSSQLDTDKDG
MGDECDDDDDNDGIPDNDDNCRLVANLDQMDSDMDKVGDACEGDFDKDNVIDMIDHCPEN
AEVTMTDFRAYQTVVLDPEGESQIDPNWVVLNQGMEIVQTMNSDPGLAVGYKAFSGVDFE
GTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAAPFRAVAEPGIQLKVVKSK
TGPGEYMRNSLWHTGNTTDQVRLLWKDPRNVGWKDKVSYRWFLQHRPQVGYIKARFYEGS
RLVADTGVIIDTSMRGGRLGVFCFSQENIIWSNLKYRCNDTIPADYEDLSRTE
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgatgactggaatgtgtgttagagcagcagctctggtcctggtgctgcagcagctggtg
ctcatcatcaccgctcagggtatcgtctacgacctgctggtgtctccagactgcctgcca
gacttgctccaaggaagcttgaagaacaaaggtcgggacgaagcatttctcctctcgtcc
tttaggctccagaacaaggcccccacctccctctttagtgtgattaaccccaaagacaac
aacaagtacctggagctcagtgtgcaagccaaactgagcaaagtgactcttcgataccag
aagactgatgggagatttggtaccaccagtttcaaccacgcagccctggcagatggacga
gagcaccacgtcatgctccatgccagaggccttcagcggggcccccctcgccttaacatc
tacgttgactgtagactggctcacactttaaatgatctgccagctgcgtttgggtcgctc
cagccgggccccaacaaggtggcgctcaggaccttgcagtcgagtggacagaatgagctg
acagacttgaagctggttattgaggacaccatagacaacgtggccactctgcaggactgc
agcgtggaaccagctgaatctctgcacctgctgggtatccagggaggcggcggggtgcaa
gaccaaaccaccacacaggagctgaagaacatgctgactgagatgagggagttgctaaac
caacagattaaagaaacaaatttcctgaggaataccattgcagagtgtctggcctgtgga
cttgaaggacgccccagtgacccagatccggctccgagtcctggtcaggtgatcctacag
cctcagcctctgactcagtgcccaccaggaacctgcttcagacaaaacatgtgcattcgt
tcagagtcaggtggcttcacgtgtgctccctgccctgatggatacacgggagatggagtt
cactgtgacgatgtggatgagtgcaagtttaacccgtgttttcctggtgtccggtgtgtg
aacactgctcccggttttctctgtgagaaatgtcctctgggatacagcgggccacaaata
aacggcgttggtgtgtcttacgctaagtcacacaaacaggtgtgtaatgatttggacgag
tgtctgagcccacctgagagtggaggctgcacagccaactcccactgctacaacaccgtg
ggctctttccgctgcggcgagtgtaaggctggcttcacaggtgaccaggtgagaggttgc
catggcaccaggctttgtcctaacggtcagcccagtccctgtgacatcaacggagagtgc
attgtggagcgagatggcagcatcagctgtgtgtgtggagttggtatggctggtaacggt
tacgtctgtgggaaggatacggatatcgacgcgtatcccgataataatctccagtgcaga
gacaacacctgtaataaggacaactgtatgtttgtccccaactctggccaagaggacgca
gacagggacggaaccggggatgcctgtgatgacgacgcagacaatgacagcatcatcaac
atagatgataactgctggctggttcctaacgtcgaccagaggaacagcgataaggatgtc
cacggggacgcctgcgacaactgtaggactatggaaaatccatcacagagggacacagac
caggacggtcttggggacgaatgtgatgatgacatggatggagacggtctgaaaaacttt
cttgacaactgccagcgagttccaaatcccgaccagcgggacagagacagtgatggagtt
ggagatgcctgcgacagctgtcctgacatgcccaacccgaaccagtcggactcagacgat
gacctcgttggagacacctgtgatgacaacattgacagtgatggtgatggccaccagaac
acaaaggacaactgtcccacagtcatcaactcctctcagctggacacggataaggatgga
atgggagacgaatgtgatgatgatgatgataatgacgggataccagacaatgatgacaat
tgcagattggtggccaacctcgaccaaatggactcagacatggacaaagttggagatgcg
tgcgaaggagactttgacaaggacaacgtgatcgatatgatcgaccactgtccggagaac
gcagaggtcacgatgaccgacttcagagcctatcagaccgtagtgctggatccagagggg
gaatcgcagatagaccccaactgggtggtgctcaaccagggaatggagatagtccagacc
atgaactctgacccaggccttgctgtaggctataaagccttcagcggtgtcgactttgaa
ggaacgttccatgtcaacacggtgacagatgatgattacgctggctttattttcggctat
caagactcatcctcattctacgtggtgatgtggaaacagacagaacaaacctactggcag
gctgcgcccttcagagctgtggctgagccgggaatacaactcaaggtggtgaagtcaaag
acaggtccaggtgagtatatgaggaactctctctggcacacaggaaacaccaccgaccag
gtgcgtctcctctggaaagatccaaggaacgtcggctggaaagacaaggtgtcctaccgt
tggttcctccagcacagaccacaagttggatacatcaaggctcgcttctacgagggctca
aggctggtggcggacacaggggtgataattgacaccagtatgagaggcgggcgactgggt
gtgttctgcttctcccaggaaaacatcatctggtccaatcttaaataccgctgcaacgac
accattcctgctgattacgaggatctgtcgagaacagagtga
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