Nothobranchius furzeri (turquoise killifish): 107393957
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Entry
107393957 CDS
T05163
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03030
DNA replication
nfu03410
Base excision repair
nfu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107393957 (pole)
03410 Base excision repair
107393957 (pole)
03420 Nucleotide excision repair
107393957 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfu03032
]
107393957 (pole)
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107393957 (pole)
Enzymes [BR:
nfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107393957 (pole)
DNA replication proteins [BR:
nfu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
107393957 (pole)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
107393957 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
CENP-B_dimeris
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
107393957
NCBI-ProteinID:
XP_015828097
LinkDB
All DBs
Position
sgr18:complement(21623716..21637349)
Genome browser
AA seq
2288 aa
AA seq
DB search
MVLQNSGRYRADRGQSGADVDNQDDGSSAVKRLERSQFTDDMDARFGFERMKEPGEKTGW
LINMHPTEILDEDRRMISAVDYYFIQEDGSRFKVALPFKPYFYIATRKNCEREVISYLSK
KFQGKVAKLEMLPKEDLDLPNHLVGLKRNYIKLSFNTVDDLIKVKREIAPAVRKNREREQ
SNDSYTSMLSSALSGGNVTSAYDDGMSKSIVDQLENIVDMREYDVPYHVRLSIDLKIHVA
HWYNVRYRGSAFPPEIVRREDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMID
GQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEADEAGLIQRWFDHVQETKPNIFVT
YNGDFFDWPFVETRAAHHGLSMHREIGFQKDSQGEYKSSQAIHMDCLRWVKRDSYLPVGS
HNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAFHVNIVFPNKQEQVFNKLTDDGHVMDSETYVG
GHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEQTMRHAIEEEEKVSLEQVTNFNEVCD
EIKKKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGA
SCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGAPRAFHTLNREEQAKHEKK
RLADYCKKAYKKIHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSV
AQECGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGAN
IITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTVSYPGAMLNIMV
KEGFTNDQYHELVEPASLVYNIRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKA
ANMPDAELFDLISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVIS
RKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRTILDWSYYIERLGSAI
QKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKKQVTHQPLE
AGHTADMEDFGRPARPPQPAVPISTKRKRASQGSDSQVESQDVELTQSWREILGPPPSKG
TTREEHLVWLRYHKKKWELQLRQRKEKKKRRKLLDGESQPVGGGVIRGGSATGLGSFLRR
TARSILDMPWQVVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGVAF
KKVNRMLPRSNMVYFLYEYSVPEEMYQKHINEINADLSAPDIEGVYETQVPLLFRALVQL
GCVCMVNKHIVRDLAGRETDSFDLEHLEMRSLAQFSYLEPGSIRHMYLYHHNQGQKALFG
LFIPSQRKASIFILDTVRSNQMPNLSNLYTAERTALLEKTTEELLPPEKHTFEVRAENDI
KAISRAVQRILLNYKEERRGPTLIAVQSNWELQRLAAAVPVLEEFPVVPVHVVDEISYNV
LDWQRHGARRMIRHYLNLDSCLSQAFEMARYYHLPVGNLPQDVSIFGSDLFLARHLRKHN
HLLWLSPTARPDLGGKEADDSRLVVENDDQVSVEINAQGCYSTVCVELDLQSLAVNTILQ
SQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQSASSLASYDETALCSNTFRILKSMVVG
WVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKRLGS
TVVYGNFNRIILCTKKRRIDDAIAYVEYITNSIHSREIFHSLSISFSRCWDFLLWMDPAN
YGGVKGKLPSSVLYGEENAKEKKITQGEEDEDGSEDEAEDNAEEDDGDGEADEVEELIES
SWNIMHYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPVKRRGGSQVSQQAV
GDLSALPGMISFSQEYVASELTQNIFTITQKIQKKVTGSRNVTQTSEMFPVLPGSHLPLN
NPALEFVKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSDEAQFRDPCNSYILPEVIC
HHCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQVQYETDSIEMALVEALQKKLMSYTLQD
LVCTKCKGVKEANMPLYCRCAGDFDLTFSSKSFAQQISMFQNIASHFNMRFLEETIHWLL
EMSPQISH
NT seq
6867 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcaaaacagcggacggtacagggcggaccgtggacaaagtggagcagatgtg
gataaccaggatgatggctcgtcggccgtcaagcggctcgagcgcagccagttcactgac
gacatggacgctcgtttcggcttcgagaggatgaaggagcccggggagaaaacaggctgg
ctgatcaacatgcaccctacggagatcctagatgaggacaggaggatgatcagtgctgta
gactactacttcatccaagaggatggaagcagattcaaggtggcacttcctttcaagcct
tatttttacattgctactagaaagaactgtgaaagggaagtcatttcatacttatccaag
aagttccaaggaaaggtggcaaaactcgagatgcttccaaaagaggacttggatctgcca
aaccatctagtgggcctgaagagaaactacatcaaactgtcgttcaacaccgttgatgat
ctcatcaaagtgaagcgtgagatcgctccggctgtaaggaagaaccgagagagggagcag
tccaacgactcctacacctcaatgttatcaagcgctctgtcaggtggcaacgtcacctca
gcttatgatgatgggatgtcgaaaagtattgtggatcagctggagaacatagtggacatg
agagagtacgatgtgccctaccacgtccgactctccatcgacctgaagattcatgtggct
cactggtacaacgttcgttaccgtggcagcgcattcccgccagagatcgtacgcagagag
gatcttgtggagcgcccggacccggttgttttggcttttgacatcgagacaaccaaactt
cctctgaagttcccagacgcagagacggatcagatcatgatgatttcctacatgatagac
ggacaggggttcctgatcacaaacagagagattgtctctgagaacattgaggattttgag
ttcactcccaaaccggaatacgaagggcctttcactgtttttaatgaggccgatgaggct
ggtctcattcagaggtggtttgatcacgttcaggagaccaaaccaaacatatttgtaacc
tacaacggagacttctttgactggccttttgtcgagacccgagctgcccaccacggcctg
agcatgcacagggaaatcggtttccagaaggacagccagggggagtacaagtccagccaa
gccatccacatggactgcctgaggtgggtaaagagagacagctacttacctgtgggaagt
cacaatctcaaggcagcagccaaggctaaactgggctacgacccggtggagctggaccct
gaggagatgtgtcgcatggcaacggaggagccacagactttagccacctactctgtgtct
gacgccgtggccacgtattacctgtacatgaaatatgttcaccccttcatctttgcgctg
tgtaccatcatccccatggagcctgatgaggtgctgcgtaaagggtctgggactctgtgt
gaggccttgctgatggtgcaggccttccacgtcaacatcgtgttccccaacaagcaggag
caagtcttcaacaagctgacggacgacggacacgtcatggactctgagacctacgtggga
ggccacgtggaggcgctggagtcgggagtgtttcgcagcgacatcccctgtcgttttaaa
atgaacccagccgccttcgacttcctgcttcaaagagtcgagcaaacaatgcgtcacgcc
atcgaggaggaggagaaagtctctctggagcaagttactaactttaatgaggtgtgtgat
gaaatcaaaaagaagctgacttccttgaaggaggttcccaataggatcgagtgccccctc
atctaccatctggacgtcggggcgatgtaccccaacatcatcctcaccaaccgcctgcag
ccgtcggcgatggttgatgaggccacgtgtgctgcctgtgacttcaacaagcccggcgcc
tcctgccagaggaggatgacctggcagtggagaggagaaatcatgcctgcaagtcgcagc
gagtttcaccgcatccagcagcagctggagtctgagaagttccccccgctgttccccaac
ggggcccccagggccttccacacactcaaccgggaggagcaggccaaacacgagaagaag
cgtcttgcggattattgtaagaaggcctacaagaagatccacgtcaccaggctggaggag
cgcgtcaccaccatctgtcagcgagaaaactccttctatgttgacacggtcagagccttc
agggatcggcgttacgaattcaaaggacttcacaaagtgtggaagaagaagctgtcagtg
gcacaggaatgtggagatgctgccgaggtgaagcgctgcaaaaacatggagatcctgtac
gactcccttcagctggctcacaagtgtattctgaactctttctacggctacgtcatgaga
aaaggggctcgctggtactccatggagatggctggcattgtgtgctacactggagccaac
attatcactcaggccagagaactcatcgagcaaatcgggaggcctctggagctggacacc
gacggtatctggtgcgtcctccccaacaccttcccagagaactttgtggtgaaaaccagc
aacgagaagaagcccaaggtgaccgtttcctacccgggggccatgctgaacatcatggtg
aaggaggggttcaccaacgaccagtaccacgagctggtggagccagcgtctctcgtgtac
aacatcaggtcggagaacagcatcttcttcgaggtggacggaccgtacctggccatgatc
ctgcctgcctccaaagaggaagggaagaagctcaagaaaaggtacgccgtgtttaacgag
gacggctctctggctgagctcaaaggttttgaagtgaagagacgaggggagctccagctc
atcaagatcttccaatcatctgtgtttgaggctttcctcaaagggaccaccctggaggaa
gtgtacgcgtctgtggccaaagtagccgactactggctggatgtgctgtacagcaaggct
gccaacatgcccgatgcagagctgtttgacttgatttcagagaatcggtcgatgtccagg
aagctggaagactatggagagcaaaagtctacatccatcagcacggccaagaggctggca
gagttcctgggagaccagatggtgaaagacgctggtctgagctgccgctacgtcatctcc
cgaaaaccagagggttcccccgtaacagaaagggccattcctctggccatcttccaggca
gagcccagcgtcaagaagcatttcctcaggaagtggttgaagatgcccagcctgcacgac
ttggacatccgcacgatcctcgattggagctattacatcgagaggttgggcagtgcgatc
caaaagatcatcaccatccctgcagctctgcaacaggtgaagaatccagttccaagagtc
agacatcctgactggcttcacaagaagctcctggagaaaaacgacatctacaagcagaaa
aaaatcagtgagctgttcaccagcgagggcaagaagcaggtgacccaccagcctctcgag
gcaggtcatacagcagatatggaggactttgggaggccggctagacccccgcagcccgcc
gttcccatcagcaccaagcgtaagcgggcgtctcaggggagtgacagtcaggtggagtct
caggacgttgagctcacgcagtcatggagagaaatcctgggaccgcctccatcaaaggga
acaacacgggaggagcatcttgtttggcttcgttatcacaagaagaagtgggagctgcag
ctgagacagaggaaggagaagaagaagaggaggaagctgttggatggagagtctcaacct
gttggaggaggtgtgatccgaggtggctccgccaccggcctggggagcttcctccgcaga
actgctcgcagcatcctggacatgccttggcaggttgtgcagattgcagaaacgagtcac
cctggtctgtacaagctgtgggctgtgatcggaaacgaccttcactgcatgaagctcaac
atcccgcgggtcttctacgtcaaccagaaagtcccaaaacaagaagagggagtggcgttc
aaaaaggtgaaccgcatgctgccgcgctccaacatggtgtacttcctgtacgagtactct
gtgccagaggaaatgtaccagaagcacatcaacgagatcaacgccgacctctcggctccc
gacatcgaaggcgtctatgaaacacaggtccccctgttgtttcgtgccctggtgcagctc
ggctgcgtgtgcatggtaaacaaacacatcgtcagagatttggccggcagagagacggat
tcctttgatctggaacatctggagatgagatctctggctcagttcagctacctggaaccc
ggaagcattcgtcacatgtacttgtatcatcacaaccagggtcagaaggctctgtttggg
ctgttcatcccctctcagcgcaaagcgagcatcttcatcttggacacggtgcgaagcaac
cagatgcccaacctgagtaacctctacacagcagagcgcaccgccctcctggagaagaca
acggaggagcttctacctccagagaaacacaccttcgaggttcgagctgaaaacgacatc
aaggcgatctctcgtgctgtgcagcgcatcctgctgaactacaaagaggagcgacgtggg
cccactctcattgccgtccagtccaactgggagctgcagcggctagcagcagccgtgccg
gtgctcgaggagttcccggtggttccggtgcacgtggtggatgagatcagctacaatgtg
ctggactggcaacgccacggggcccggcgcatgatccgccattacctcaacctggacagc
tgcctgtctcaggcttttgaaatggccaggtattaccacctgccagtgggtaatttgccc
caggacgtgtccatctttggctccgacttgttcctggcgagacatctacggaaacacaac
catctgctgtggctttcacccacagccaggcccgacctcggtgggaaagaggccgacgac
agccgcctggtcgtagaaaacgacgatcaggtgtccgtggagatcaacgcacaaggatgt
tattccacagtgtgcgtggagctggatctgcagagcctggcggtgaacaccatcctccag
tcgcagcatgtcaacgacatggagggcggggccagtctgggcgtgagctttgacgtgatc
cagcaagcgtcgttggaggacatgatgtcaggaaaccaaagcgccagctctttggctagc
tatgatgagacggctctctgctccaacaccttcaggatcttgaagagcatggtggttggg
tgggtcagggagatcacgcagtaccacaacgtgtacgcagacaaccaggtgatgcacttc
taccgctggctccgctccccaagctctctcctctacgacccggcgctgcaccgcacgctg
cacaacatgatgaagaaggtgttcctgcagttggtggcagagttcaaacgtctgggctct
actgtggtttatggaaactttaacaggatcatcctgtgcaccaagaaaaggaggatagac
gacgccattgcctacgtagaatacataaccaacagcatacattccagggagatcttccac
tccctgtccatctccttctcccgatgctgggacttcctgttgtggatggatccagctaac
tacggcggcgtcaagggcaaactaccttccagcgttctgtatggagaggaaaacgccaaa
gagaagaaaatcacacaaggagaggaagacgaggacgggagtgaagatgaggctgaggac
aacgctgaggaagatgatggagatggagaggctgatgaggtggaagagctgattgagagc
agctggaacatcatgcattaccttccccaaacggcttcctgtcagaaatacttcctcatg
attgtttcagcctacatcgctgccgtttaccacagcatgaaagaggagctgagacgtaac
gctccgggagcaacgccagtcaagaggcgcggaggcagccaggtttcacagcaggccgtt
ggggacttgagcgcacttcctggaatgatttccttctctcaggagtacgtggcgagcgag
ctgacccagaacattttcaccatcactcagaagatccagaaaaaggtgacgggctccagg
aacgtgacccagacgtcagagatgtttcccgtcctgcccggctcacacctgcctctgaac
aaccctgctctggagttcgtcaaatacgtttgccaggtcctttctctggatgccaacatt
gtgaatcaggtgaacaagctgaagcgagacctcctacgtctggtggatgtgggggagttt
tcagacgaagctcagttccgtgatccctgcaactcctacatcctgcctgaagtcatctgc
caccactgcaatttctgtcgggacctggacctgtgtaaggacccgtcagtggcacaggac
gggtctgtgttgcctcagtggttctgctcaaactgtcaggtccagtatgagacagactca
attgagatggccctggttgaagctctgcagaagaaactcatgagctacacgctgcaagac
ctggtgtgcaccaaatgtaaaggggtgaaggaagcaaacatgcccctctactgcagatgt
gccggcgactttgacctgaccttctcatccaagagcttcgcccagcagatctccatgttt
cagaacattgcatcccatttcaacatgagattcctggaggagaccatccactggctgctg
gagatgagccctcagatcagccactga
DBGET
integrated database retrieval system
