Nothobranchius furzeri (turquoise killifish): 107393960
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Entry
107393960 CDS
T05163
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107393960 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107393960 (ube3b)
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107393960 (ube3b)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
HECT type E3
107393960 (ube3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
107393960
NCBI-ProteinID:
XP_015828107
LinkDB
All DBs
Position
sgr18:21707515..21717849
Genome browser
AA seq
1068 aa
AA seq
DB search
MFSVPQSSKSEFLDKARQAREERKGQKEKEKSAILIQALIRRFLCRCRLQKQIRKEVDDY
FQTSETGTTKRNALSILKIARKLLFIYGQEDKMRFEKLCRAILASMEVENEPKVWYVSMA
LSKDLTIPWLKQIKDVLWTCCQLLKNLKPDILQDNKLVTLYLTMLVTFTDTSTWRIVRGK
GEALRPALTKICENIMGHLNQKGFYSMLQILLSNGLARSKPSLSKGTLTAIFTLSMRPVV
AAHFSENLLRSFLIHIMSVPAIVYHLNVLTPECMASIQSHGLLRKFILFLSREEQCLDIC
VCLEGSHTLCLLGNLIYLGYLNEKVVEEEANHFVKDLTDMLSYCQRYVSQKKSNLTHWHP
VLGWFSQTVDYGLNESMPLVTKQLQYLWGVSVIRTLFSDVLSKKLESQEATPPPPQPSTS
QNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTALSTLTQIRLQ
ILTGLTHLDDLLPKLWAFICELGPQGGLKLFMECLNNDTEESKQLLAMLMLFCDCSRHLI
TILDDIEVYEEQTSFKLEELLTISSFLNTFVYKMIWDGILENAKGEKLELFHSVHGWLMV
LYERDCRRRFTPDDHWLRKDLKPSLLFQELEKGKRRAQLLLQYIPHVIPHKNRVLLFRNI
VTKEKESLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGV
DEAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGK
MLGKAVYEGIVVDVPFASFFLSQVLGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDV
GDLGLTLSYDEDVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAFI
RGFRSIINPEWLHMFSTPEVQRLISGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDIL
SSDFNAEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFT
IRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgtccctcaaagctccaagtccgagttcctggacaaagccaggcaggctaga
gaagaaagaaagggacagaaagagaaggagaaatcagcaatcctcattcaagctctgatc
cggagattcctctgtcgctgcaggctccagaagcaaataaggaaggaagttgacgactat
tttcaaacctctgaaactggcacaacaaaaagaaatgcactttcaattttaaaaatagct
cggaaactactatttatttatggccaagaggataagatgcgatttgaaaaactctgccgc
gctattctggccagcatggaggtggaaaacgaacctaaagtgtggtatgtttcaatggct
ctctccaaagacctcactattccctggctaaaacagatcaaagatgttttgtggacgtgc
tgtcaacttttgaaaaatctaaagcctgacatcctccaagacaacaagctggttacattg
tacctcaccatgctggtgaccttcactgacacgtcaacatggcggattgtcagagggaag
ggtgaagccctcagaccagctttgacaaagatatgtgagaacatcatgggccatctcaac
caaaagggattctattcgatgctgcagatcttgctgtctaatggcttggctcgctctaaa
ccatctctctccaaaggcaccctgacagccatctttactttgtcaatgaggccggtcgtt
gctgctcacttctctgaaaacctgctgagatcattcctcatccacatcatgtccgttcct
gccatcgtttaccaccttaatgtgttaaccccagagtgcatggcgtccattcagagtcat
ggcctgctgcgaaagttcattttgtttctcagtcgggaagaacagtgcctggacatttgt
gtttgtcttgagggcagccacacgctctgcttgcttggaaacctgatttatctgggctac
cttaacgagaaagtcgtggaagaggaggctaatcattttgtgaaggacctgactgacatg
ctgtcgtattgccagagatatgtttcacaaaagaagtccaacttaacccactggcacccc
gtcctgggctggttctctcaaactgtagactacggtctaaacgagtcgatgccgctggtc
accaagcagctccagtacctctggggcgtgtctgtaatccgaacgctcttcagcgatgtc
ctctctaagaagctggagagccaggaggccactccccctcctcctcaaccgagcacgtca
cagaacaacctgccagttaaaaatctattcaagagagcgtttcagaagtcggcttctgta
cgaaacattctgaaaccggtcggagggaagcgagtcgactcagctgaagttcagaaagtg
tgcagcatctgtgtgctctaccaaaccgcgctttccactctgacacaaatacgcctccag
atactcactggtctgacgcaccttgatgatcttttacccaaactgtgggccttcatctgt
gagcttggtcctcaggggggcctcaagctcttcatggagtgtctgaacaacgacacagag
gagtccaaacagctgctggccatgctcatgctgttctgtgactgctcacgtcacctcata
acaattctggatgatattgaagtttatgaagaacaaacctctttcaagctggaggagctt
ctcaccatctcctcttttctaaacacatttgtgtacaagatgatctgggacggcatctta
gaaaatgcaaaaggagagaaactggagctgttccacagtgttcacggttggctgatggtg
ctttatgagcgggactgccggcgtagattcactcctgacgatcactggctacggaaggat
ctgaagcccagtttgttgttccaagagctggaaaaaggcaagagaagagcccagctttta
ctgcagtacatccctcatgtcatcccacataaaaatagggtgctgctgttcaggaacatc
gtcacaaaggaaaaagagagtttagggttggtagagacgagctccgcctcgccacacgtc
acccacatcaccattcgccggtcgagaatgctcgaggatgggtacgaccagctccgcagg
ttacctgtgaattccataaaaggtgtcattcgtgtgaagtttgtaaacgacctgggagtg
gacgaggctggaatcgatcaagacggtgttttcaaggagtttctagaggagatcattaag
aaagttttcaatcctgctcttaatttgttcaagacgacgagtggaaacgaaaggttgtat
ccatcacctacttcctacatccacgagaatcacttgcagctgtttgagtttgtagggaag
atgctcggaaaagcggtttatgagggcattgtcgtggacgtcccgtttgcctccttcttc
ctcagtcaagtcttgggacatcaccatagcaccttctacagctccattgatgagcttccc
tctctggactcagagttttacaaaaacctcacctccatcaagcgttatgatggagatgtg
ggcgatctgggactgactttgtcctatgacgaagatgtaatggggcagcttgtctgtcat
gagttgattcctggggggaaaaccatgccggtcaccaatgaaaacaagatcagctacatc
cacctgatggcgcacttccggatgcacacacagattaaagagcaaacggctgctttcatc
cggggcttccggagcatcattaatcccgagtggctgcacatgttttccacacctgaggtc
cagcggcttatctcaggggataacgccgagatcgatctagacgatctcaagaaacacacc
gtctactatggcggtttccacagcagccatcgggtcatcatctggctgtgggacatcctg
tctagtgactttaacgctgaagagagggctatgttccttaaatttgtgaccagctgttca
agaccgccgcttctaggttttgcttacctcaaaccacctttctccatccgatgtgtggaa
gtttcagatgatcaggacactggagacactcttggcagcgtcctcaggggcttcttcaca
atccggaagaaggagcctggtggtcgacttcctacttcgtccacgtgcttcaacctcctc
aagctgcccaactacagcaagaagagcatcctgcgtgacaaactgcgctacgctatcagt
atgaacaccggcttcgagctctcctaa
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