Nothobranchius furzeri (turquoise killifish): 107393979
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Entry
107393979 CDS
T05163
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107393979 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nfu01002
]
107393979 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107393979 (usp30)
04121 Ubiquitin system [BR:
nfu04121
]
107393979 (usp30)
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107393979 (usp30)
Peptidases and inhibitors [BR:
nfu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107393979 (usp30)
Membrane trafficking [BR:
nfu04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
107393979 (usp30)
Ubiquitin system [BR:
nfu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107393979 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
107393979
NCBI-ProteinID:
XP_015828140
UniProt:
A0A1A8VGC2
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All DBs
Position
sgr18:complement(22098228..22102378)
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AA seq
518 aa
AA seq
DB search
MLSCRPDSSDKLVGEFLGTGPVIRNKMIKNWSVIGGIAAAIAAGVYVMWGPITVRKKRKR
GMVPGLLNLGNTCFLNALLQGLAACPSFIKWLEKFSGMPTIQSCKGNQLSTTLLQLLKAL
STDEPGEEDVLDAGCLLDVLRLYHWHINSFEEQDAHELFHVLTSSLEEERNRQPKVTHLF
DVQSLENLPNHEDKTMACRSRAPLHPIPDPWKFHHPFHGRLTSNMSCKHCEIQSPLRYDS
FESLSLSIPLPQWGRPISLDQCLQHFISSETIKEVECENCTKLQQSTTLNGQVLENQRTT
FVKQLKLGKLPQCLCIHLQRLTWSSEGTPIKQQEHVQFTEFLLMDRYKHNSSSPKNRLNK
CSSIAETPGSLNDNTERPKANGKDTEHHNNNKPFSNDSCSSVFLHSSGLNPQLGLSFDYS
VFPSSSTEYLFQLMAVLVHHGDMHSGHFVTYRRSPSAFSSQWLWVSDNSVRKASLQEVLS
SNAYMLFYERVGRPSLGPNSNESLSLEGKAIRSKIILS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcttgcagaccagacagctctgataagcttgttggggagtttcttggcacagga
cccgtaatcagaaacaagatgataaaaaactggagcgtcatcggagggatagcggctgcg
attgctgctggagtttatgtcatgtggggcccaattacagtaaggaagaaaaggaaaaga
ggtatggtcccaggtctgttaaatctgggcaacacctgcttcttgaacgctctgctccag
ggcttggctgcctgtccgtccttcatcaaatggttagagaagttttcaggcatgcccacg
atccaatcatgcaaaggcaaccagctgtctaccacactgctgcagcttctcaaagctctg
tccactgatgaacctggagaagaagacgttcttgatgctggatgcctcctggatgttctc
agattgtaccactggcacatcaattcatttgaagagcaggatgcacatgaactttttcat
gttctcacatcttctctggaggaggagcggaatcgtcaacccaaagtcactcatttattt
gatgtgcagtcgctcgagaaccttcccaatcacgaagacaaaactatggcctgcagaagt
cgagctcctcttcatccaataccagatccttggaagtttcaccatccttttcacggtcgc
ttaacaagtaacatgtcctgcaagcactgcgagatacaaagtccgctgcgatatgactcg
tttgagagtctttccttgtccatccctcttcctcagtggggtcggcccatctctttagac
cagtgcctgcagcattttatttcatcagaaactatcaaagaagtggagtgtgaaaactgt
acaaagcttcaacaaagcacaactctaaatgggcaagttttggaaaaccagaggacgacg
tttgtcaaacagctgaaacttggaaagctccctcagtgcctctgcatccatctgcaacga
ctgacctggtccagtgaaggaacccccatcaaacaacaggagcacgtgcagtttacagag
tttctgttgatggatcgctacaaacacaacagctcctcaccaaagaatcggctgaataag
tgttcttccatagctgaaacgcctgggagtttaaatgataacacagaaaggccaaaagcc
aatggaaaggatacagaacatcacaacaacaacaaacctttctctaatgacagctgttcg
tctgtatttcttcattcttctggtttaaacccacagcttggcctctcattcgactacagt
gtctttccctctagttcgacagagtacttgttccagctcatggctgtgctggtgcaccat
ggggacatgcactcgggacatttcgtcacgtaccgccgcagcccctcagccttcagctca
cagtggctttgggtgtcggacaattcggtacggaaagccagcctgcaggaggtgctgtcc
tctaacgcgtacatgctcttctatgaaagagttgggaggccgagcctcggtccaaactca
aacgagtcattgagccttgaggggaaagctattaggtcgaaaataattttgtcttga
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