Nothobranchius furzeri (turquoise killifish): 107393994
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Entry
107393994 CDS
T05163
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107393994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107393994
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107393994
Protein recycling
Other Rab GTPase associated proteins
107393994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
107393994
NCBI-ProteinID:
XP_015828166
UniProt:
A0A1A7ZJI6
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All DBs
Position
sgr18:23309157..23313589
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AA seq
473 aa
AA seq
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MWTDKHRGIRVSQEELLCKNGCGYYGNPAWKGFCSKCWREKSRPAGVSRHDARPSNDGAP
PTFSKFEEKKNIEKGSRYNTVRRLFWGSSSPPKPQESSESNANMLKAFQSLEPGDFPSFL
KILRSPSSQRLQSRCTAFLKTMEAYHALPVQKQSDLVQDFFQSFADVFRSFPEDHVTQIM
EHVEKLIMTRLHKWVFCHDSSDDELKDLALQRRIRSLNWVTPRMLSVPFPHENIPVTGDP
FLPAITAIIEMDAKRAPQDKLACVSKCSQQIFEALSASNNEPANADDFLSRLVYVLLKAN
PPRLHSNMQYMIRFGLPHSLMAGESGYYFTNLSCAVAFIEKLDGPALSLSPEEFESYMRG
QRAPAALTKRQQVVGDTQHVLEELQGRQERLQHGADVLGVELQEWVRAIHTQLDEATNQL
VEVQKEMKAQAEASRVSSTCPDESTRGRDEEESILVPSDQHVGPKNQNVAPNH
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtggaccgataaacatagaggaatcagagtttctcaggaagagctgctgtgtaaaaat
ggctgtggttattatggaaaccccgcctggaaaggcttctgctccaagtgctggagggaa
aaatcacgcccagctggagtctcaagacatgatgcgaggccgagtaatgatggagcgcct
ccaacattctccaagtttgaggagaagaaaaacattgagaagggtagccgttataacacg
gtgaggaggctgttctggggcagctcctcacctccaaaaccccaagagtcctcagaaagc
aatgcaaacatgttaaaagcctttcagagtctggagcctggagatttccccagtttccta
aagatactccggagtccatcttcccaacgtttacagtcccgctgtaccgctttcctcaaa
acaatggaggcttatcatgctcttccggtacagaagcagtcggacctcgtgcaggatttt
ttccagtcttttgcagatgtttttcgaagttttcccgaggatcatgtcacccagataatg
gagcatgttgagaagctgataatgacgcggctgcacaagtgggttttctgccacgacagc
agcgatgacgagctgaaggacctggctcttcaacgaaggatacgctccttaaactgggtc
actccgcgcatgctgagtgtcccttttccacatgaaaacattccagtcacgggtgacccg
tttctccctgctataacagccataatagaaatggatgccaaacgtgcgccacaggataag
ctcgcgtgtgtgtccaaatgcagtcagcagatcttcgaagctctctcagcctccaacaac
gagcccgccaatgctgacgacttcctgtcaagactggtttatgtgttgctgaaggccaac
cccccacggcttcactcaaacatgcagtacatgattcgttttggactcccacacagtctc
atggccggagagagcggctactacttcacaaacttatcctgcgcggtggccttcattgaa
aagctggacggaccagcgctcagtctcagtccagaagagtttgagagctacatgcgaggt
caacgcgcccccgctgctttaaccaagaggcagcaggttgttggggacacgcagcacgtg
ctagaggagctgcaaggcaggcaggagaggctgcaacatggagcggatgttcttggcgtg
gagttacaggagtgggttcgagcaatccacacacagctggacgaggcaacaaaccagctt
gtggaggtgcagaaagagatgaaagctcaagctgaggcctcacgggtttcatcaacatgt
ccagatgagtccacgagaggaagggatgaagaagaatccattctagtgccttccgatcaa
catgttggtccaaagaatcagaatgtggcacctaatcattaa
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integrated database retrieval system
