Nothobranchius furzeri (turquoise killifish): 107394051
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Entry
107394051 CDS
T05163
Name
(RefSeq) sodium/calcium exchanger 1-like isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04020
Calcium signaling pathway
nfu04260
Cardiac muscle contraction
nfu04261
Adrenergic signaling in cardiomyocytes
nfu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
107394051
04020 Calcium signaling pathway
107394051
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107394051
04261 Adrenergic signaling in cardiomyocytes
107394051
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfu02000
]
107394051
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107394051
Transporters [BR:
nfu02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
107394051
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Others
107394051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
107394051
NCBI-ProteinID:
XP_015828276
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Position
sgr02:24438099..24455602
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AA seq
963 aa
AA seq
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MSRTGTLLPFSTYQLLFFMTIFSLDLPASKAGHSAPDLESNTTISNQTKCGGSTNCIEGV
ILPVWKPENPVFTDRLARATIYFVGLFYMFVGVSIIADRFMASIEVITSQERKITIKKPN
GEKIVTTVRIWNETVSNLTLMALGSSAPEILLSVVEVCGHNFNAGELGPNTIVGSAAFNM
FVIIGLCVSVIPEGETRKVKHLRVFFVTAAWSVFAYTWLYLILAVFSPGVVEIWEGLLTL
FFFPICVGFAYVADRRLLFYKYMYKRYRVGKQKGMIIETEGEPNLPTKVDIEMDGKILNS
HCDEMLDGEAGFEAKEMDEEEARKEMTRILKELKQKHPEKEMEQLMELANYQVLTQQQKS
RAFYRCQATRIMTGAGNVLKKHAADQAKRAIQHDLCSEVSVNSFSSKVFFDPGSYQCLEN
CGSVALNVVRRGGDLNTTVSVDYQTEDGTANSGSDYRYTKGTVVFKPGETEKEIRIDIID
DDIFEEDEHFLVHLSNVRVTSEDTDRRDPNHTDTIAGLGLPCSATVTIFDDDHAGIFTFE
EPVVTVSESIGVMEVKVLRNSGARGFVVVPYKTIEGTAKGGGEDFEDTHGVLEFENDEIF
KTIHINIIDDEEYEKNKNFFLEMGEPQLLEMSHRKAVLLQEVGGFIRTGKDVYRKVQGRD
HPVPSSIISITDGLCEEVLTKKEKEERRIAELGRPMLGEHARLEVIIEESYEFKNMVDKL
IKKTNLALVIGTNSWREQFVEAITVSSGDDDEGESGEEKLPSCFDYIMHFLTVFWKLLFA
FVPPTDYWNGWACFIVSISVIGLLTAVIGDLASHFGCTVGLKDSVTAVVFVALGTSVPDT
FASKVAAIQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHYTKGQEFRVDPGTLAFS
VTLFTIFAFICIAVLIYRRRPSIGGELGGPRIPKILTTSLFFSLWFTYIVFSSLEAYCHI
PGF
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgaactgggacgttgttgccgttttccacctatcagctgcttttcttcatgacc
atcttctccctggacttaccagcttcaaaggcagggcactctgctccagacctcgagtcc
aacaccaccatcagcaaccagaccaaatgtggcggcagcaccaactgcatcgagggcgtc
atcctgccagtgtggaaaccggagaatccggtcttcactgaccgcctggctagagccacc
atctactttgtgggtttgttctatatgttcgtgggtgtctccatcatcgccgatcgcttc
atggcatccatcgaagtgatcacgtctcaggagagaaaaatcaccatcaagaaaccgaac
ggtgagaagatcgtcacgacagttcggatctggaatgagacggtgtccaacctgacgctg
atggccctgggttcctctgcacctgaaatcctcctgtcggttgtggaagtctgtggtcac
aactttaacgccggcgagttgggtcccaacaccatcgtaggaagcgctgccttcaacatg
ttcgtcatcatcggactttgtgtgtctgtcatccctgagggagagaccaggaaggtaaag
cacctgcgggtcttcttcgtcaccgcagcctggagcgtctttgcctacacctggctttac
ctgattctggcggtcttttcacctggtgtggttgagatatgggaggggcttctgacactc
ttcttcttccccatttgtgttgggtttgcttacgtggcggaccgcaggctccttttctac
aagtacatgtacaaacgataccgggttgggaagcagaaaggaatgattatcgagactgag
ggagagccaaaccttccaacaaaggtggacattgaaatggatggtaaaatactgaactcc
cattgcgatgagatgcttgacggagaggcggggtttgaggcgaaggagatggatgaggag
gaggcccgcaaagagatgaccaggatcctaaaggagctcaaacagaagcatccggagaag
gagatggagcaactaatggagctagctaattaccaagttttaacccagcaacagaagagt
cgagccttttaccgctgtcaggccaccaggatcatgaccggagcaggtaacgtcctgaag
aagcacgccgctgatcaggccaagagagccatccagcacgacctctgctccgaggtgtcg
gtcaacagcttttcctccaaagtgttctttgatcctgggagctaccagtgtctggagaac
tgtggcagcgtggcactcaatgtggtccgtagaggtggagacttaaacaccaccgtgtcc
gtggactaccagaccgaagacggcacggcaaactctggttccgactatcggtacaccaaa
ggaaccgttgtgttcaaaccaggcgagaccgagaaagaaatccgcatcgatattattgac
gatgacatatttgaggaggatgagcatttcttggttcatctcagcaacgtgagggtgaca
tcagaagacacagaccgccgcgacccaaaccacacggacaccatcgcaggcctcgggctg
ccttgctcggccacggtcaccatttttgatgatgaccacgctggtatcttcacatttgag
gagccagtggtcactgtgagcgagagcatcggggtgatggaggtgaaggtgctcaggaac
tcaggagctcgtggctttgtagtggtcccgtacaaaactatagagggaacagctaaagga
ggcggtgaggactttgaggacacgcatggcgtcctggagtttgagaacgatgagatcttc
aaaacaattcatatcaatataattgatgacgaggagtacgaaaaaaacaagaacttcttc
ctggaaatgggggagcctcagttgctggagatgagtcatcggaaagccgtgttgcttcag
gaagttggtggattcatcaggacaggcaaagacgtctacagaaaagtccaaggccgagac
caccccgtcccttcctccatcatcagcatcacagatgggttgtgcgaggaggttttaaca
aagaaggagaaggaggagaggcgaattgcagagttgggcagaccaatgttgggcgaacat
gcccgactggaggtcatcattgaggagtcttatgagttcaagaatatggtggataaactc
atcaagaagaccaacctggctctggtgattgggaccaacagctggagggagcagtttgta
gaggccatcaccgtcagctccggtgatgatgatgagggtgaatcaggagaagaaaaactt
ccatcctgttttgattacatcatgcacttcctcaccgtcttttggaagcttctgtttgcc
ttcgttcctcccaccgactactggaacggctgggcctgcttcatcgtgtccatttctgtc
atcgggctcctgacggccgtcattggagacctggcgtcgcattttggctgcaccgtcggc
cttaaagactccgtcaccgctgtggtgtttgtggctttgggcacttctgttccagacacc
tttgccagtaaagtagcagccatccaggaccaatatgccgacgcctcaattgggaacgtg
acaggaagcaatgctgtgaatgtcttcctgggaattggcgtggcatggtccattgctgct
atctaccactacacaaaaggtcaggagttcagggtggacccaggaacgctggccttctct
gttacactcttcaccatctttgccttcatctgcattgctgtgctgatctaccggcgccgg
ccctcgattggcggggaactgggaggtccacggatacccaaaatcctgacaacgtccttg
ttcttcagtctatggtttacgtacatcgtgttttcatcactggaggcttactgccacata
ccgggcttctag
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