Nothobranchius furzeri (turquoise killifish): 107394150
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Entry
107394150 CDS
T05163
Symbol
dmxl1
Name
(RefSeq) dmX-like protein 1
KO
K24155
rabconnectin-3a
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107394150 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107394150 (dmxl1)
Membrane trafficking [BR:
nfu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107394150 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
107394150 (dmxl1)
RAVE complex
107394150 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_IFT140_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
NBCH_WD40
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_WDR19_2nd
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
107394150
NCBI-ProteinID:
XP_015828421
UniProt:
A0A9D2XE49
LinkDB
All DBs
Position
sgr18:complement(31918992..32025439)
Genome browser
AA seq
3082 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGNVNDVPFTAYASGCDVVILGSNFERLQIIPGAKHGNIQV
GCVSCSPHGGQIAASYGSIVCVFEPVQLSDLKETSVSKLKCQWQKTGQFVLESMVRNLAW
HPTGNTLLTGSTSLQLWSNDDGGTDEAEERGRRTTRDSDSTWKSIWQCRTASSVTFMKFS
PDGEFFATAGQDDCLIKVWYNTNKWKSCAARLFTPPDASGDVHGDLAFSFVYLAHPRSVT
GFSWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDTLISGYRDNHASDDENVKSG
SSFSKSTCDGKTQQEQFCFQESWHFSYNRDVPQPSVTGCLLHHQNQHYNHRRSSSSSSPH
ANALCHFHIAASINPATDIPLLPSISSLNSVDDDEPGGPFTVHWLNNKELQYTLAMEVFL
EQLRGSLEQRKEFSTEELDYEENSDEDESRAADPHELDDVGLPVAAVEHQVDVLLEEWNK
AADMLFSIHPIDGSLLVWHVDWLDEFQPGMFRQTQVSFVSRIPVAFPTGDAISLSHSVVM
YACNKNVDLAIQHGRQKPPGSSLSQTKAALISYGSQGKATPSSSLRLSIFTPNVLMISKH
DDGSLNQWAVSFAEDSAFSTMLSVSHKSRYCGHRFHLNDLACHSLLPLLLTTSHHNALRT
PEVDGILAPPEAHFKSLPHGSRPSRVSMGGASQDPNAIYSELILWRVDPVGPLSLSGGVS
ELARINSLHASAFSNVAWLPTLIPSSCLGVYCNSPSACFVASDGQSLRLYQAVIEAKKLL
SELSNPEVSKYVGEVFNIVSQQSTAKPGCIIELDAITDFQGKETQLLHVFEEHLILGDVS
KEDTQETPDSPCNDSSKPAFSRRFFLVVVELSPTGRSLLHMWHLHLAACPVTIEETAAQK
DIDPFSPLISPQFIFDALNSPGIQKSKPCTSNLQSTCRLTLTTHRLCSQEMALPAGVEAI
SVTPSAGHLSASCSLPAGHVPYLLATSCSDGKVRFWRCHAASTEPSRVDSLVYQWEEWPL
LLEDRFPNSSSVSVPGRPIKVSCCHTGRIAVAYRELSHAPLNSTPHLSFHRPPIPPNLAS
SPYASNNTTHRIPTLTVQPSPSLTLKSNPAHTREPPVHISIFQCESTGGSQWILEQTVVL
DATDPTSDRGISSSTAGGAGIWNNFHFSVPNDNCLGSAGKSLVHLDWVSQEDGSHILTVG
IGTKIYMYGRVSGKPPELGLSSETNRDQRLSHLVLLRSVNLVSSVEGSLPLPVSLSWVRD
GILVVGMECEMHVYSQWQPPVPSKPNVTVVQDMDVSSSVSSIVSAVRLYQNGHNPGPPLS
SLTLPKRSLTRSMMSLAQKLSGKKTAYDLPVEMEDSGLFEAAHNLFPTLPQYHPVQLLEL
MDLGKVHRAKAILSHLVKCIAGEIVILKENATNPERRVRSRTISVGGSTSRDEKIFSKAE
SSSPDYTEISSVPPLPLYALLAADEDTPQIEKAASVSGDSGHGSSQTDAYDELFHTPNTV
DLDPLDNEKEENGNKVIDLSQYSPTYFGPEHAQVLSSHLLHSSLPGLTRMEQMSLMALAD
TIATTSTDLKNNQDKSKGGETLDECGLRFLLAVKLHNFLLTSLPPVHRAQLRRQGLSTCH
YAWAFHSEAEEELLNMLPALQKGEPTWTELRSMGLGWWLRSTNKLRRCIEKVAKASFQRS
NDPLDAAIFYLALKKKAVVWGLYRSQKNVKMTEFFHNNFSEDRWRKAALKNAFSLLGKQR
FQHSAAFFLLAGSLKDAVEVCLEKLQDLQLALVISRLYESEFEAASTYKKILQRYVLGHD
KQIPANPDPFLRSIAYWVLEDYSRALDTLIEQPNQKSSVSSQSSSVMSACNPEVFNFFIY
LRTHPLLLRRHFSSSDKSKVALTAECRRADSISLDERRLFFTAAYAHLHAGCPMLALEVL
SKMPKVHKHCKLSSQEDTGIAPELSIGSRNGQPSDPDWSPPGLNGYHSDGNSNSQSDSVL
SFDWSQPSLTLPDESLELKWDSDKDDEDQEETKTTVKSADNSVFQDRQDSALTTAETVKS
GNGDNGDFIAPSDDIFLAQLKFTACLKIMTNELRTLSTGYELDGGKLRYQLCQWLEREVM
AHQRCCSYKPRLPEQSVQSDAPVSGLVEEEQPGSPRGDVQRSRRLWLQSNQPLLRMFLSY
CSLHGSHGGGLASVRMELILLLQESHQDDFIRSAVTASSQPTSIPLLMACTVSVKTVVAN
PIIYLTNLTHDILQTIVSLDSPPHPDVVNNEIYVMHTLAASLSACIYQCLCDGHKYSHVN
HFTGTVYQSVPLSQKQPLKSVSMDETVLPNTSPAQWPGIASLVRLLSSAGEDTQPGLAVL
LCEILTAVFLSLFVHGVATHSSNELFRIVAHPLNSKLWMTVFGGGSRVPLMDKPSSPART
PPLTSPSGSDRRSRRFRLLSSRSGSKEESGIEREGPYSPKHGPVVEQEATSIFKEHFVPP
ELSIWDYFIAKPVLPPSENGIDYDSEQSQDSQDDDDDDDDEDDDVFDPSSPQREHSNNNS
YSWCLMRLALVQLVLVNLKSFYPMAGYDLLDLPVASPLCHSVLKTLQRWEQVLQKRLEIF
EGPPSKYISTYLHEEATTPGPALLRHKALFEPSNTPFRNNHFSALPVKRLWQHLVKQEEV
QETFIRNIFTKKPGTSQSVEDQTDCMKYSAMEETGSNQTESDLGCPGGKARIIHKESDII
TAFAINKANRNCLAMASTHDIQELDVSSILATQVLAWIDDDETETKTFGGDDFLVVHARD
DFVALHGTTPYTHSSPGTPISVPWLGAQQTGRGAAVMIKRNINNVRRMTSHPTLPYYLTG
AQDGSVRMFEWGHSQQITCFRSPGNSRVTRIRFNHQGNKFGIVDADGGLSLWQTNTSGNT
PKPYLTLQCHNKTAHDFVFVGSSSLIATAGLSADNRNVCLWDTLVTPANSLVHAFCCHDS
GATVLSVAPRQQLLITGGRKGWITILELSHRDQRQSFQAHDSPVKALAVDPTEDCFISGS
AEGNIKVWSIATQCLLYTFPNEHARQSLFRNLGTGVMQIEVGPVNHIFSCGADGTMKMRL
LPNRFAAVNNNHHHKNDVKFFI
NT seq
9249 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaggtcctcacaggggctgtcaaccctggggacaactgtttctctgtc
gggaatgtcaacgacgtgcctttcacggcctacgcttcaggctgtgatgtggtgattttg
ggcagtaactttgaacggttgcagatcatcccaggggccaagcatggtaacatccaggtg
ggttgtgtcagctgctcaccacacggtggacagattgcagcttcctatggaagcatcgtc
tgtgtgtttgagcctgttcagctctcagatctaaaggaaacatccgtgtcgaaattgaaa
tgccaatggcagaagactggtcagtttgttttggagtccatggtacgaaacctggcctgg
caccccacaggtaatactctgttaacaggctctactagcctccagttgtggtctaatgat
gatggtggaacagatgaagctgaagaacggggaaggcggaccacacgagactctgattct
acctggaagagcatctggcagtgcaggactgcctcttcagtcacgtttatgaaattctct
cctgatggggaattctttgccactgctggacaggacgactgcctgataaaggtctggtac
aacaccaacaagtggaagtcgtgcgccgccagactgtttacacctcctgatgccagcggg
gacgtccatggagatctggccttctcctttgtctacttggcccatcctcgctctgtcacc
ggcttctcttggaggaagactagcaagtacatgccccgaggcgccgtctgtaacgttctc
ctcacctgctgtaaggacagcgtttgtcgactgtgggcagagacgctgttgccaggtgac
accctgatctctggttaccgtgacaaccacgcgtctgatgatgaaaacgtcaaaagcggc
agctccttttcgaaaagcacctgcgatgggaagacgcaacaagaacagttctgctttcaa
gaatcctggcatttctcctacaatcgggatgttccccagccctcggtgaccggctgcctg
cttcaccatcagaaccaacactataaccaccggaggagcagcagcagcagctcaccccac
gctaacgctctctgccacttccatatagctgccagcatcaaccccgccacagacattcct
ttactgccctccatctcctctctgaattcggtggatgacgatgaacccgggggtccgttc
accgttcactggctcaacaacaaggagcttcaatacactttagccatggaggtgtttttg
gagcagctcagaggcagtttagaacaaaggaaggaattctccaccgaagaacttgattat
gaagaaaactcggatgaagatgaaagcagagcagccgacccccatgagcttgatgacgtg
gggcttcctgtagctgccgtggagcaccaggtggacgttctgctggaggagtggaataaa
gcggcagacatgttgttcagtatacaccctatagacggctccctgttagtctggcatgtc
gactggttggatgaattccagccaggcatgttcagacaaactcaggtgtcgtttgtgtcc
cggatccctgtggcattccctacaggtgatgccatctccttgagccacagtgtggttatg
tacgcatgcaacaagaacgtggatttggccatccaacatggcagacagaagccacctggg
agctcactgtctcaaaccaaagccgctctaataagctatggcagtcaaggtaaggccaca
cccagcagtagcctccggctcagcatcttcacccccaatgtcctgatgatctccaaacac
gacgatggctctctgaatcagtgggcagtcagttttgcggaggactccgctttctccacc
atgctcagtgtttcgcacaagtcacgctactgtggtcaccgtttccacctcaacgacttg
gcctgtcactctttgcttcctctcctcctcaccacctcgcaccacaatgccttgaggacg
cccgaggttgacggcatcctggctcctccagaggcccacttcaagtctctgcctcatggc
tcacggccttccagggtgtccatgggtggggcttctcaagatccaaacgccatctacagt
gagctgattttatggcgtgtagacccagtcggtcctctgtccttgtcgggcggggtgtcc
gagctcgctaggataaactctcttcatgcatcggcgttttctaatgtagcctggctgccc
acgctcattcccagcagctgtctaggtgtgtactgtaactcccccagcgcttgctttgtg
gcgagtgacggtcagtccctcaggctctatcaggctgtcatcgaggctaagaaactcctg
agtgagctctccaatcctgaggtttctaaatatgttggagaggtgttcaacatcgtcagt
cagcagtccacagcaaaaccagggtgcatcatagagctggacgccattactgactttcag
ggcaaagagactcagctcctgcatgtttttgaagaacatctgattcttggcgacgtgagc
aaagaagacacacaggaaactcctgactctccctgtaacgattccagtaaaccagctttt
tccagacgtttctttctggtggtggtggaattgtccccaaccggtcgctcgctcctccac
atgtggcatctccatcttgctgcttgccctgtaaccatcgaggaaaccgcagcgcagaag
gacatagacccgttttctcctctcatcagccctcagttcatctttgacgcactcaattct
ccaggaattcagaagagtaaaccctgcacttccaatctgcagagcacctgtcgcctcacc
ctcacaacacacaggctgtgcagccaagagatggctcttcctgctggcgtggaagccatc
agtgtcactccctcagcaggtcacttgagcgcatcatgttctctaccagctgggcatgtg
ccttacctccttgctacttcctgttctgatggaaaggtgcgcttctggaggtgtcacgct
gcatcaacagagccctcccgtgtggacagtttggtgtatcagtgggaggagtggcccctt
cttttggaggataggtttccaaacagcagctcagtgagtgttcccggtcgccccatcaag
gtgagctgctgtcacaccggacgaatcgctgtagcctacagggagctgtcgcacgcccct
ctgaactcaacacctcatctgagctttcatagaccaccaatccctccgaatttggcatcc
tcaccatatgcatccaacaacaccacccatcggatcccaaccctgactgttcagccaagc
ccgagtctgactctgaagtctaacccagcacacacgagagaacctccagtacacatcagc
atcttccagtgtgagtctactggtggctcccagtggattctcgagcagactgtagtcttg
gacgcaaccgatcccacaagcgaccgtggaattagcagcagcacggccggaggtgccggt
atctggaacaattttcacttttctgtacctaatgataactgtctaggttctgctggtaag
agcttggttcacttggactgggtctcgcaggaggatggatcccacatactgaccgtcggt
attggaacaaagatttacatgtacggccgtgtgtctgggaaacccccagagttgggtctt
tcttctgaaacgaacagagaccaacgtttgtctcacctggttttgcttcggtcagtgaat
ctcgtctcttccgttgaaggctccctgcctctcccagtttccctctcttgggttcgagat
ggaatcctggtggtgggcatggagtgtgagatgcacgtctactcccagtggcagccccca
gttccttccaaaccaaatgttactgttgtccaggacatggacgtgagcagcagcgtgtcc
tctatagtctccgctgtcagactgtaccagaacggtcataaccctggacctcctctgtct
tcactcactcttcctaaaaggtccctaacaagatccatgatgagcctggcgcagaaactc
agcgggaagaaaacggcgtacgaccttcctgttgaaatggaagattcggggctttttgaa
gcagctcacaacctttttcccactctgccccagtatcaccccgtccaactgctggagcta
atggatctaggaaaggttcaccgtgccaaggcaatcctctcccacttggtaaaatgcatc
gctggggaaatagtgatacttaaagaaaacgccaccaatccagagagacgggtgcggtct
cgaactatcagcgtcggaggcagcacatcaagagacgagaagatattcagcaaagcggag
agctccagccccgactacacagagatcagctccgtccctcccctgcctttatacgctctt
ctggcagccgacgaggacacgcctcaaatcgaaaaagcagccagtgtgagcggagacagt
ggccatggctccagtcagacggatgcctatgatgagctcttccacacaccaaacacagtg
gatctggatcctttggacaatgaaaaggaggaaaatggaaacaaggtcatagacttgtcc
cagtacagtcccacatactttggtccagaacatgcccaggtcttatcaagccacctcctc
cactccagtttgcccggattgactcgaatggagcagatgtctctcatggcgctggccgac
accatcgctaccacgagcacagatctcaagaacaaccaggacaagagtaaaggtggagag
acgctggacgagtgtggactgaggttcttgctagctgtcaagctccacaacttcctctta
acgtccctgccccctgtacaccgagctcagctgcgacgacagggtctctccacatgccac
tatgcctgggccttccactctgaagcagaggaggagctgctgaacatgctgcctgccttg
cagaaaggggagcccacctggactgagctgcgctccatggggctgggctggtggctgcgc
agcaccaacaaactgcgcaggtgcatagagaaggttgccaaggcctcgtttcagaggagc
aatgatcctctagatgctgccatattttaccttgctctgaaaaagaaagcagtggtctgg
ggattgtacaggtctcagaagaacgttaagatgacagagttcttccacaacaacttcagc
gaggacaggtggaggaaagctgcactgaagaacgccttctctctgttggggaagcagcga
ttccagcactccgcggccttttttcttctcgccggttccctgaaggatgctgtggaggtg
tgtttagagaagttgcaggacctacagttggctctggtgatctcaagactgtatgagtca
gagtttgaggcggcgtccacttacaaaaagatcctccagcgatacgtactgggacacgac
aaacagattccagccaatccagatccattcctgcgaagcatagcttactgggtcctggag
gactacagcagagcgctggacactctaatcgagcagcctaaccagaaaagctcagtgtcc
tcacaaagttcctctgtcatgtctgcatgtaaccccgaggttttcaacttcttcatctat
ctccggacacaccctcttcttctccgccgacattttagctcctcagacaagtcaaaagtg
gctttgactgctgaatgtcgtcgagccgactccattagtctggacgagaggagactgttt
ttcacagctgcatatgctcacctgcatgccggatgccccatgctagcacttgaagtcctg
tccaaaatgcccaaagtccacaagcattgcaaactctccagtcaggaagacacgggcatc
gcaccggaactcagcatcgggagcaggaatggacaaccatcagatcccgactggtcgccg
ccgggcctgaatggctaccactcagacgggaacagcaacagccaatcagactcggtactg
agttttgactggagccagccatcactgacccttccagatgagtcgctggagctgaagtgg
gacagtgacaaggacgacgaggatcaagaagaaacaaaaacaacagttaagtctgcagac
aacagcgtgtttcaggacaggcaggactccgccttgacgacagcagaaacggtgaaaagt
ggtaacggagacaacggggactttatcgcaccgtctgatgatatctttttggctcagctg
aagttcacagcatgcttgaagatcatgaccaatgagctccggacactgtcgaccgggtat
gagctggacggagggaagctgcgttatcagctctgccagtggctcgaaagagaggtgatg
gctcatcagcgctgttgcagctataagccgcgtttgccagaacaatctgtccagagcgat
gccccggtttccggcctggtggaggaggaacagcctgggagcccccgcggcgatgtccag
aggagcaggagactctggctgcagagtaaccagccattactgaggatgtttctgagctac
tgcagcctgcacggctcccacggtggcggactggcttctgtacgcatggagctcatattg
ctgctacaagagtcccaccaggatgacttcatcaggtctgcggtgacagcgagctcccag
cccacctccatcccactcctcatggcttgtaccgtcagcgtgaagacggtggtggccaac
cccatcatctacctcaccaacttgacccacgacatcttacagaccatcgtttcactcgac
tcgcctccacatcctgatgtcgttaacaacgagatttatgtgatgcacaccttggctgct
tccttgtctgcctgtatatatcagtgcctttgtgacggacacaaatacagccacgtgaac
catttcaccgggacggtgtatcagagcgttccgctgtcgcagaagcagccgctcaaaagc
gtcagcatggacgagacggttctgcccaacacctctcccgctcagtggccaggtatcgcc
tccctcgtccgcctgttgagctcggccggcgaggacactcagccgggtctggccgtgctg
ctctgtgagatcctgactgccgtgttccttagtctgtttgttcacggcgtggccactcac
tccagcaacgagctgttccgcatcgtggctcacccgctcaacagcaaactctggatgacg
gtgtttggaggaggctcccgggtccctctcatggataaacccagcagcccagcaagaaca
cctccattgacctcaccgtccggctcggacaggaggtccagacgattcaggcttctttca
tcacgcagcggatccaaggaggaatctgggattgagcgggaggggccatacagtcccaaa
cacggtcccgtggtggaacaggaagccacctccatctttaaagagcattttgttcctcca
gagctcagcatttgggattattttattgctaagcctgtgctgccgccatcggaaaacgga
atcgattatgactccgagcagagccaggacagccaagatgacgacgacgacgatgatgat
gaagatgatgatgtgtttgacccaagctctccacagagagaacattcaaacaacaactca
tacagctggtgtttaatgcgcctagccttggttcagctggtgctggtcaacctcaagtcc
ttctacccgatggcaggatatgatctgttagatttgcctgtggcttctcctttgtgccac
tctgtgctgaagacgctgcaacgctgggagcaggtgttgcagaagaggctggagatcttt
gagggacctccatccaagtacatctccacttacctccacgaagaagccaccacgcctgga
ccagccctgctcagacacaaagctctgttcgaaccatccaacactccattcagaaataac
catttttcagccctgccagtgaagcgtttatggcagcatttggtcaaacaggaagaagtg
caggagacgttcatcagaaacatcttcaccaagaaacctggaacaagtcagtctgttgag
gaccagaccgactgtatgaaatattcagcaatggaagagaccggaagcaatcagactgag
tcagatctgggctgccccggaggcaaagcgcgcatcatccacaaggaatctgacatcatc
acagcctttgccatcaacaaggcgaaccgcaattgtttagccatggcttccacccatgat
atccaggagctggatgtgtcctccatcttggccacacaggttttggcgtggatcgatgat
gatgagacggaaaccaaaacttttggtggggacgacttcctggtggtccacgcacgcgac
gactttgttgcactccacggcaccacgccgtacacccacagcagccccggcacaccaatc
agtgtgccgtggctcggagcccagcagaccggcagaggcgcggccgtgatgatcaagagg
aacatcaacaacgtgcggagaatgacctcccatcccacgctgccgtactacctgactgga
gctcaggacggcagcgtgaggatgtttgagtggggtcattcccagcagatcacctgtttc
agaagtccaggaaactccagagtcaccaggatacgattcaaccaccaaggaaacaagttt
ggtatcgtcgatgctgatggaggtttgagcctctggcagaccaacacaagcgggaacacg
cccaagccctacctgactctacagtgccacaacaagacggcgcatgactttgtctttgtg
ggctcctcctcccttattgctactgcaggtctttcagcagataacaggaacgtgtgtctg
tgggatactttagtcactccagctaacagcctcgtacacgctttctgctgccatgactcc
ggcgccaccgtgctctcggtggccccgaggcagcagcttctcatcactggcgggaggaaa
ggctggatcaccatcttggagctttcccaccgggaccagcggcagagcttccaggcccac
gactccccagtcaaagcactggcggttgacccgacagaggactgcttcatcagcggatcg
gccgagggcaacattaaggtgtggagcatcgccacgcagtgtctcctctacacgttccca
aacgagcacgcccgccagtccctgttcaggaacctcgggacgggcgtgatgcagatcgag
gtggggccggtcaaccacatcttctcctgcggcgccgacggaaccatgaagatgaggctt
cttcccaaccgcttcgccgctgtgaacaacaaccaccatcacaagaacgatgtcaaattc
ttcatatag
DBGET
integrated database retrieval system
