Nothobranchius furzeri (turquoise killifish): 107394207
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Entry
107394207 CDS
T05163
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107394207 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107394207 (usp39)
Spliceosome [BR:
nfu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
107394207 (usp39)
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
107394207
NCBI-ProteinID:
XP_015828545
UniProt:
A0A9D2XEQ7
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Position
sgr18:complement(22857666..22865766)
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AA seq
499 aa
AA seq
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MISLKREREIELDDDDNEDGVVIKRGRGHAVEDRRSRHCPYLDTINRSVLDFDFEKLCSI
SLSHINVYACLICGKYFQGRGQKSHAYTHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSL
EDITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSNV
PPLRNYFLEEENYREIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLC
SKKTFQITKQGDAVDFMTWFLNALHGALGGTKKKPSIITKAFQGSMRIFSKKLPHPDLLP
EEKEALLLTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFSGTTE
KEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLSEYLTEE
AQATEKNTTYDLVANVVHDGKPTEGSYRIHVLHHGTGKWYEMQDLQVIDILPQMITLSEA
YIQIWKRQESSDTNSHTAE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgatttccctaaaacgagagagggaaattgagctggacgacgatgataacgaagacgga
gttgtaatcaaaaggggccgaggacatgcagtagaagacagaagaagtcgccactgccct
taccttgacaccataaacaggagtgtgcttgattttgattttgaaaagctctgctccatc
tcgctctcccacattaatgtttatgcttgcctcatctgtgggaaatattttcaaggcaga
ggtcagaagtctcatgcatacactcacagtgtccagtttagccatcatgtgttcctcaac
ctgcacacactcaagttttactgtctgccagataactatgagatcattgactcgtcatta
gaagacatcacgtatgtgctgaagccaactttcaccaagcagcacattgctggactggac
aagcagggcaaactgtacagagcctacgatggtacaacttacctgccgggcattgtggga
ctaaacaacatcaaagccaatgattatgccaatgtggtgttacaggctttttccaatgtg
cctcctttgcgaaactacttcctggaggaggagaactacagagaaatccgcagaccaccg
ggagacatcatgtttcttctggtccagaggtttggtgagctgatgcgcaaactttggaac
ccgagaaactttaaggcccatgtgtctcctcatgagatgctgcaggctgtggtcctgtgc
agcaagaagacctttcaaattaccaaacaaggtgatgctgtggacttcatgacatggttc
ttgaacgctctgcatggtgctcttgggggaacaaagaagaaaccatctataatcacaaaa
gcatttcaaggatccatgaggattttctccaagaaacttcctcacccagatttgctacca
gaagaaaaagaggcattactccttacggaggagtaccaggagcagatgtctgagtccacc
ttcctgtttctgacccttgacctcccaacagctcctctgtacaaggatgagaaggaacaa
cttatcatcccacaggtccctctatttaacatcctgggcaagttcagtggcaccacagaa
aaggaatacaaaacctacaaagagaatttcctcaaaagattccagttgaccaaactgcca
ccgtacctcatcttttgcatcaaaagattcaccaagaacaatttctttgtggaaaaaaat
ccaacaattgtcaatttcccgatcacgaacgtggacctttctgagtatctgacagaagaa
gctcaagctacagagaagaatacgacttatgaccttgttgcaaatgtggtgcatgatggg
aaacccacagagggatcatacaggatacatgtcctgcatcatgggacagggaagtggtac
gagatgcaggacctgcaggtcatcgacattcttccccagatgatcacgctgtcagaggct
tacatccaaatttggaagagacaggagagcagtgacacaaacagccacacggcggagtaa
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