Nothobranchius furzeri (turquoise killifish): 107394256
Help
Entry
107394256 CDS
T05163
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107394256 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107394256 (polb)
Enzymes [BR:
nfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107394256 (polb)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
107394256 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
107394256 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
HHH_2
NTP_transf_2
DUF4806
Cdd1
Motif
Other DBs
NCBI-GeneID:
107394256
NCBI-ProteinID:
XP_015828607
UniProt:
A0A1A8AP04
LinkDB
All DBs
Position
sgr18:complement(33993153..34003592)
Genome browser
AA seq
336 aa
AA seq
DB search
MSKRKAPQESLNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTIAKYPNKIKSGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFEEGVK
TLDDLKKVEHKLNHHQKIGLKYFEEFEKRIPRAEMEKMETLILGELTEIDTEYIGTICGS
YRRGAASSGDIDILLTHPKYTSQTEKQPKLLHAVVEHLESVGFVTDTLSKGDTKFMGVCQ
LQPSDDDEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PLGVTGVAGEPLLVDSEKDIFDYIQYKYREPKDRSE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaagcaccgcaagagtccctaaatgagggaattactgactttcttgtc
gagctggcaaattacgagaagaacgtcaacagagcaatacacaagtacaatgcatacagg
aaagcagcttccaccattgccaagtaccccaacaagattaagagtggagaagaggccaag
aaactggatggagttggagccaaaatagcagaaaagattgatgagtttcttcaaactggc
aagttaaggaaacttgaaaagatccgaaacgatgacaccagctcttccatcaatttcctt
accagagtaactggaattggcccggctgccgcaaggaagttcttcgaggaaggggttaag
actttagatgatttgaaaaaggtagagcacaagctaaatcatcatcaaaagattgggctc
aagtactttgaagaatttgaaaaaagaatcccacgagctgaaatggagaagatggagact
cttattcttggagagttgacagaaatcgatacagaatacatcggaacaatttgtggaagc
tacaggagaggtgcagcatcgagtggtgatattgatattttattgacccacccaaagtac
acttctcaaaccgagaagcagcccaaactccttcatgctgtggttgagcatttggagtct
gtcggcttcgtcaccgacactttgtccaaaggagacaccaagttcatgggcgtctgtcag
ctgcagcctagtgatgatgatgaggaagaatatcttcacaggcgtattgatataaggttg
attcccaaggaccaatactactgtggagttctgtattttactggaagtgacatctttaac
aaaaatatgaggactcatgccctggagaagggcttcactcttaatgagtacaccataaga
ccacttggtgtcactggagtggctggggagcctctgctggtggatagtgagaaagacatc
tttgactacatccagtacaaatacagagagccgaaggatcgcagcgagtaa
DBGET
integrated database retrieval system
