Nothobranchius furzeri (turquoise killifish): 107394263
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Entry
107394263 CDS
T05163
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04142
Lysosome
nfu04144
Endocytosis
nfu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107394263
04142 Lysosome
107394263
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107394263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107394263
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107394263
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
107394263
Exosome [BR:
nfu04147
]
Exosomal proteins
Proteins found in most exosomes
107394263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
capSnatchArena
LVIVD
Motif
Other DBs
NCBI-GeneID:
107394263
NCBI-ProteinID:
XP_015828620
UniProt:
A0A1A7ZGU2
LinkDB
All DBs
Position
sgr18:34102899..34145208
Genome browser
AA seq
1689 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIIDMSDPTN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTEEVMFWKWISVNTV
ALVTDAAVYHWSMEGDSQPAKVFDRHASLAGCQVINYRTDEQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKPSTLFCFAVRSQAGGKLHIIEVGQPAAG
NQPFSKKAVDVFFPPEAQTDFPVAMQIGDKHGVIYLITKYGYIHLYDLESGVCIYMNRIS
AETIFVTAPHEGTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLGLRMAVRSNLAG
AEELFARKFNTLFAQGSYSEAAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKATDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLIQD
EEPLANINQIVDVFMEGSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTPALVELFESFKSYEGLFYFLGSIV
NFSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLIMVVRGQ
FSTDDLVEEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPEKFLKENPF
YDSTVVGRYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWAKV
LEENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINKLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQRDLIKEAIDSYIKAVDPSAYME
VVNAASKSNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQ
QVGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFA
CVEGEEFRLAQICGLHIVIHADELEDLISYYQDRGHFEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMKEHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVITMM
NHPTDAWKEGLFKDIIAKVANVELYYKSVSFYLDYKPLLLNDLLTILSPRLDHSRAVSFF
TKMDQLQLVKPYLRSVQNHNNKSVNEALNNLLTEEEDFQGLRASIDAYDNFDMIGLAQRL
EKHELIEFRRIAAYLYKRNNRWRQSVELCKTDKLYKDAMLYAAESKEAELAETLLQWFLE
EGRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGFAVKVTV
DKLEESDSKRKTDDDVKEPQPIVFAGQQLMLTGAASPVAPVTPQPPYPGYSYPPAAAGYP
TPPGYGFNM
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatactaccgatacgattccaggagcatctccagctccagaacctgggtgtg
aacccggccaacatcggcttcagctacctgaccatggagtcagacaagttcatctgcatc
agggagaaggtgggcgagcagaaccaggtggtgatcatagacatgtcggaccccaccaac
ccaatacggaggccgatctctgctgacagcgccatcatgaaccctgcaagcaaggttatc
gcattaaaagacgctgccaaaacattgcagatcttcaacattgagatgaagagtaagatg
aaagctcacaccatgacagaagaggtcatgttctggaagtggatatctgtaaacaccgtt
gccttggtgaccgatgctgctgtgtaccactggagcatggagggggattcccaaccggcc
aaagtgttcgatcggcacgccagtctggctggatgtcaagtcattaactacagaactgat
gagcaacagaagtggttgctgctgatcgggatttctgcacagcaaaaccgcgtggttgga
gcgatgcagctgtattcagtcgacaggaaggtgtctcagcctatcgagggccacgccgct
gcctttggggagttcaaagtggagggaaatgccaaaccttccactctgttctgcttcgcc
gtgcgctcccaggccgggggaaagttgcacatcattgaagttggacagccggctgcaggg
aaccagccgttttctaagaaggctgtggatgtgttctttcctccagaggcccagacagac
tttcctgtggctatgcagattggtgacaaacatggagtcatatacttgatcacaaaatac
ggttacattcacctgtatgacctggaatcaggcgtgtgtatatacatgaatcgaatcagt
gcagagaccatttttgtgactgcgcctcatgaaggcacctcagggataatcggcgttaac
aagaagggacaggtcttgtcggtatgtgtggaagaggagaacatagtcaactatgccaca
aacgttctgcagaacccggatctcggcttgaggatggctgtaaggtcgaacctcgcagga
gcggaggagctctttgccagaaagttcaacactttgttcgcccaagggagctactccgag
gctgcaaaggttgctgcatctgcaccgaagggcatcctgcgaacagcagaaaccatccgt
aagttccagagcgtcccggcccagccgggccaggcctccccgctcttgcagtactttggt
attctgttggaccagggccagctcaacaagtttgagtctctggagctgtgcaggcctgtc
ctgcagcagggccgcaagcagctgctggagaaatggctgaaggaggacaagctggagtgc
tccgaggagctgggagacctggtgaaggccactgacccaacgcttgctcttagtgtttat
ctcagagctaacgtccccaacaaagtcattcagtgctttgcagaaactgggcagttccag
aagattgttctgtatgctaagaaggtgggctacaccccagactgggtgtttctcttaagg
aatgtgatgcgtgtgaatccagaccagggactccagttcgcccagatgctgatccaagac
gaggagccgctagccaacatcaaccagattgttgacgttttcatggagggaagcctgatt
cagcagtgcacctctttcctgttggatgctttaaagaacaaccgaccagctgaaggacac
ctgcagacgcgtctgcttgagatgaacctgatacacgccccccaggtagcagatgccatc
ctggggaaccagatgttcacacactatgaccgagcccacgttgctcagctgtgtgagaag
gcgggcctgctgcagagagctctggaacattacaccgacctgtacgacatcaagcgagcc
gtggtgcacacacatctgctcaaccccgagtggctggtgaacttttttggctccttgtcc
gttgaagactcgttggagtgtttaagggccatgctgtcggctaacatcaggcagaacctg
cagctgtgtgtccaggttgcatcgaagtatcacgagcagctgggaactccggcgttagtc
gagctcttcgagtccttcaagagttacgaaggcttattttacttccttgggtcgattgtg
aatttcagccaggagcccgacgttcactttaaatacatccaggctgcttgtaaaactggt
cagatcaaagaagtggagcgaatctgcagagagagcaactgctacgaccctgagagggtt
aaaaatttcctcaaggaggctaagctaacagaccagcttcccctcatcatcgtgtgcgat
cgctttgacttcgtccatgacctggtgctctacctctacagaaacagtctgcagaagtac
attgaaatctacgtgcagaaagtgaaccccagccgcctgcctgtggtgatcggtggtttg
ttggatgttgattgctccgaggatgtcattaaaaacctgatcatggtggtcagggggcag
ttttctactgatgatctggtggaggaggtggagaagaggaacaggttgaaacttctgttg
ccatggctggagtcgcgtatccacgaaggatgtgaggagccagctacccacaatgccctc
gccaagatctacatcgacagcaacaacacgccggagaagttcctgaaggagaacccgttc
tacgacagcaccgtggtcggccggtactgtgagaagagagacccccacctggcctgtgtg
gcttacgagagaggacagtgcgacctggagctcatcaaagtgtgcaacgagaactcatta
ttcaagagcgaggctcgatatctcgtgcgccggaaagatccagagctttgggcaaaggtg
ttggaagaaaacaatcctttcaggaggcagctcatcgaccaggtggttcagacggcgctt
tctgagacccaggacccagaggaggtgtccgtcacagtcaaggccttcatgactgcagac
ctgcccaacgagctgatcgagttgctggagaagatagtacttgacaactctgtgttcagt
gaacaccgaaacctgcagaatctgctgattttgacggcgatcaaggcggatcgcacgcgt
gtgatggagtacattaacaagctggataactacgatgctcctgatatcgctaacattgcc
atcagcaatgagctctttgaagaggcgtttgccattttcaagaagtttgacgtgaacacc
tcagccatacaggtcctgatagagcacattgggaacttggaccgtgcctatgagtttgca
gaacgctgcaacgagcccgcggtatggagccagttagccagagctcagctgcaaagagac
ttgatcaaagaggccatcgactcctacattaaagccgtggatccatctgcttacatggag
gtggtgaacgcagccagcaagagcaataactgggaggacttggtgaagttcttacagatg
gctcgtaagaaagccagagagtcgtacgtggagacggagctgatttttgctttagctaaa
acgaaccgtttggctgagctggaagaatttgtcagcggacccaacaatgctcacatacag
caggtgggcgatagatgttatgaggagggcatgtatgaagcagccaaacttttgtacaac
aacgtgtccaactttgctcggcttgcttctaccttggtgcacctgggagagtaccaggct
gctgtggacagtgcaagaaaagccaacagcacacggacgtggaaggaggtttgctttgcg
tgtgtagagggggaggagtttcggctggctcagatctgcggtcttcacatcgtgatccac
gcggacgagctggaggacctgatcagctactaccaggaccgcggtcacttcgaggagctc
attgctcttctggaggccgctctgggtctggagcgggcccacatgggcatgtttaccgag
ctcgccatcctctactcaaagttcaaaccacagaagatgaaggagcatttggagctcttc
tggtccagagtcaacattccaaaggtcctccgtgcggccgagcagtctcatttatgggct
gagctggttttcctttacgataaatacgaggagtacgacaacgccgtcatcactatgatg
aatcatccgacggatgcttggaaagaagggctgttcaaagacattatagcaaaagttgcc
aacgtggagctgtactacaaatcagtctccttctacctggactacaaacctcttctgctt
aatgacctgctgaccatcctgtctcctcgtctggaccacagcagagcggtcagcttcttc
actaagatggatcagctgcagctggtgaagccgtacctgaggtctgttcagaaccacaac
aataaatctgtcaatgaagctctcaacaacctgctgacggaagaggaggacttccaggga
ctgagggcctccatcgacgcttacgacaactttgacatgatcggcttggctcagaggtta
gaaaaacacgagctgattgagttcagacgtattgctgcttatctttataaaagaaacaac
cgctggaggcagagtgtggagctctgcaagacggacaaactctacaaggatgccatgctg
tacgctgcagagtctaaggaagctgagctggcagagactctgctccagtggttcctggag
gagggcaggaaggagtgctttgctgcctgcctgttcgcttcctatgacctcctgcatcct
gacgtggtgctggagctggcctggaggcacaacatcatggactttgccatgccatacttc
atccaagtcatgagagagtacctcaccaaggttgatgggtttgcagtgaaggtgacggtg
gacaaactggaggaatcagacagcaaaagaaaaactgatgacgatgtgaaagaacctcag
ccgatagtttttgcaggccagcagctgatgctaaccggcgctgcctctcctgttgccccc
gtcacccctcagccaccctacccaggctacagctacccgccggctgctgcaggttacccc
accccgcccggatatggcttcaatatgtag
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integrated database retrieval system
