Nothobranchius furzeri (turquoise killifish): 107394277
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Entry
107394277 CDS
T05163
Symbol
ykt6
Name
(RefSeq) synaptobrevin homolog YKT6
KO
K08516
synaptobrevin homolog YKT6
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04130
SNARE interactions in vesicular transport
nfu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107394277 (ykt6)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107394277 (ykt6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107394277 (ykt6)
Membrane trafficking [BR:
nfu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
107394277 (ykt6)
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
vATP-synt_E
Motif
Other DBs
NCBI-GeneID:
107394277
NCBI-ProteinID:
XP_015828645
UniProt:
A0A1A8B1M5
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Position
sgr18:complement(34475080..34481289)
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AA seq
198 aa
AA seq
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MKLYSLSVHYKGSTKANLLKAAYDLSSFSFFQRSSVQEFMTFTSALIVERTSQGTRASVK
EQEYLCHVYVRNDNLGGVVIADTEYPQRVCFTLLEKVLDEFSRQVDSVDWPSGSPDTVHY
KALDIHLSKYQNPREADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVAKSEHLGNQ
SKAFYKTARKQNSCCEIM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctacagcctcagcgtccactataaagggtcgaccaaagccaatctcctgaaa
gcggcctatgacctgtcatccttcagcttcttccagcgctccagtgttcaagagttcatg
accttcaccagtgcactgattgttgaacgaacatctcaaggaacccgtgcctccgtcaaa
gaacaagagtacctgtgccatgtgtacgtgagaaacgacaacttgggtggtgtggtgatc
gcagacactgaatatccacagagggtctgcttcacgctgcttgaaaaggtattagatgag
ttctccaggcaagtggacagtgtagactggccatccgggagtcctgacaccgtccactac
aaagctctggacattcacctttctaagtaccagaatcccagagaagctgatgcaatgacc
aaagtgcaggcagagctggatgagaccaagatcattttgcacaacaccatggaaagtctg
ttggaaagaggagagaaactggatgacctggttgcgaagtcagagcacctgggaaatcag
tccaaagccttctacaagaccgcacggaaacagaactcgtgctgtgaaatcatgtga
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