Nothobranchius furzeri (turquoise killifish): 107394412
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Entry
107394412 CDS
T05163
Name
(RefSeq) leucine-rich repeat-containing protein 16A-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107394412
Membrane trafficking [BR:
nfu04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
107394412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_Zer-1
LRR_4
Motif
Other DBs
NCBI-GeneID:
107394412
NCBI-ProteinID:
XP_015828824
UniProt:
A0A9D3BI25
LinkDB
All DBs
Position
sgr19:complement(3930623..3991828)
Genome browser
AA seq
1559 aa
AA seq
DB search
MSEDKSNISNELFESVREAVGRRVKLTLRRKVQLEFKGGKVENRVLALASHRAYLLTARV
PSKVEQSFSYLEIQGISSNKPTQLVLDHERGPWSLRLGSVEEVDEVIAHIGVCLYRICPA
GSPVKLMRKLNLKPPERLTALQDFWNEQSSADLGPCGGFSHQYWCVCDGLGLPYREEVQW
DVDTIYLTQDTKELNLQDFVHLENRDLVAIIAVLEYNQWFTKLSSKDIKLSTDVCDQIFR
VVARSSRLEELVLDNAGLRSDFVQKLASALSQNPSCTLQTLNLSNNSLEDKGVSALSVQL
AKLPMGLKHLNLSRTSMSPKGVNSLCQALCANPIIASTLTHLDLSGNSLRGDDIQNLHGF
LSHQNHLETLDLSNSDCSLESVCASLCKGSLKHLSVLNMSKTVFSHRKCKEIPATFKQFF
SSAHTLSSVSMSGTRLPLEALKALLLGLGCNPNLSEVSLDLSCCELRSGGSQILEGCIAE
IPNISSLDISDNGLDMDLTTLLVWLAKNRSIRHLSLGRNFNNIKSKNVSQVLDNLVHMIQ
EEESPLTSLSLADSKLKSDLSIVLNALGSNTSLTKLDISGNSMGDMGAKMLAKALQINTK
LRTLMWDRNNVSCQGLQDVAAALEKNHTIRFMPVPIMDAAQALKANPEKTEEALLKMEQY
LLRNHETRKYLQEQAYRLQQGIVTSTTQQMMDMMCVRVQDHLNSLRFSETISVLEDIKVA
ENLMKDARNSKTLLPNLYHLKSSSSREACVEAIQDKLESMAGEVGTVMDEQLQTLLVSMV
DAAEGLCPHVMKRSSLRQELLKAGAGRMTIPRSFITNTLLEQSGVDIINKISEVKLSLAS
FLSDRIVDEILESLSGSQNTLADHLIRKGQPLLHHDVHMETEVLDETVLQQENHQKAQKR
DKEQKYGPDEMQSLTMTPKSKRKSILVRMLRPVSVAFEMEFDLDKALEEVPIHYEDPPLP
SPPPLHTSDRMSYFGDFPPTPTDTNSVSLGELPPVEHKPLENCTKFRPKPKRRKPSRSPR
QATGLSVPQDAEQNGMMGKLDEGVDDFFTKKVTKLSFNFPFARSPSTITPESTDKKRESR
KSGFFNYIKSRASRSEKTTGASSISPPHPSPTSSSTINPIHEISSPSSPTLPVKSPVMSV
AESHPELHRAHSSDHTNLEREAPLTAPKPVEEEKEEKTLELGDHLEKAEHAEKKENVEKK
ETPHVHRYIGVPMMGKDLLAEMKARQNRTKQEKIAVKKADSSPGTDEKDTDKPTSDDRPT
VKVDLHPTSKLDLHPTIKSDIHPTVKLEVDSTSKVDLHPTFKVDLHPTSKVDLHPTSKVD
LHPTSKVDLHPTSKVDLHPSSKVVHPTVKSEVDLTTKVDVHPVVPVDTEHSKPEPIPRSR
PPSVTQKQSPTQATKSPLVPRTSGSLSPLRQRPFSISVLDDSVDIQVGSTSPKAPLPAPR
LKRAQSEQDRGSVSSSSSGPLSPLDAVFPADGDAFDQPVTELEPGSGSRQWSSLKRSSSP
PSVKEDAHERAKSLPTYVRLPSQMEADLSPAEGEIPTVTSDLNPNNKFEDESGDDPPSM
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggacaagtcaaacatctccaacgaactcttcgagagtgtgcgagaggcggtg
ggtcggagggtaaaactcaccctgaggcgcaaagtccagctggagttcaaaggtggcaag
gtggagaacagagttttggcgttggcgtcacatcgagcatacctgctgacagctcgagtt
ccttctaaggttgagcagtcattcagctacttggaaatccaaggaatcagcagcaacaag
cccactcagttggtattggatcatgagcgaggtccctggagccttcgactgggatctgtg
gaggaggtagacgaggtgatcgcacacatcggtgtctgtctctatcggatctgccccgct
ggctcccctgtaaagttgatgaggaagttgaatttgaaacctccagagaggctgacggcc
ctccaggacttctggaatgagcagagctcagctgatctaggaccctgtggtggattttct
catcagtactggtgtgtgtgtgatggcttgggtctgccctacagagaggaagtccagtgg
gacgttgacaccatctatctcactcaggacaccaaagaactaaacctgcaggactttgtt
caccttgagaacagggatctggtggcaatcattgcagttcttgaatacaaccagtggttc
accaaactctcatctaaggacatcaaactgtctacggatgtgtgtgaccaaatcttcagg
gttgtggctcgctccagtcgactagaagagctggttctggataatgctggactcagaagt
gattttgtgcagaaactggccagcgcgctgtcacaaaacccatcctgcacactccaaaca
ctcaacctgagcaacaactcactggaggacaaaggggtttcagctttgagtgttcaactt
gccaagttgcccatgggcctgaagcacctgaacctttccagaacctccatgtctcctaaa
ggtgtgaacagcctctgtcaggctctctgtgctaaccctatcattgcatcaacgctcact
cacctcgatctttctggtaactccctcagaggagacgacattcagaatctgcacggcttc
ttgagtcaccaaaaccacctggagacgctggatctttccaacagcgactgttcactggag
tcggtgtgtgcatctctgtgcaaaggttctttaaagcacctctctgtgcttaacatgtca
aaaacggttttctctcacaggaagtgtaaggaaatcccagcaactttcaagcagttcttc
agctccgcccacactctgtcttcagtcagtatgtcaggaacaaggctgcctctggaggct
ctgaaagcgttattgttgggccttggctgcaacccaaacctcagtgaagtgtctctggat
ctcagctgctgtgagctacgttcaggaggatcccagatcctggagggttgcatcgctgag
atcccaaacatttccagtttggatatttcagataatggtttggacatggatctcaccacc
cttcttgtctggttagcgaagaaccgctccatccgacacctttcactgggcagaaacttc
aacaacatcaaatccaagaatgtgtctcaagtcctggacaacctagttcacatgattcag
gaagaagagtcgccgttgacgtctctgtctctggcggattccaagctgaagtccgacctg
tccatcgtcctcaacgctctcggcagcaacacctccctgaccaaactggacatcagtgga
aactcaatgggagacatgggggctaagatgttggccaaagccctgcagatcaacacgaag
ctcaggacattaatgtgggacagaaacaacgtcagctgtcagggtttacaggatgtagct
gctgctttagagaaaaaccacaccattcgtttcatgcctgttcccatcatggatgctgct
caggcactgaaggccaatccagagaagacagaggaggctttactaaagatggagcagtac
ctgctgaggaaccatgagacgcgtaaatacctgcaggagcaggcatacaggctgcagcag
ggaatcgttaccagcactacgcagcagatgatggacatgatgtgtgtgagggtgcaggac
cacctgaactctctgaggttctcagaaaccatctctgttctggaggacataaaagtggca
gagaacctcatgaaggatgctagaaactccaaaacgcttcttccaaacctgtaccacctg
aagagcagcagctctagagaggcctgtgttgaagccattcaggacaaactggagtcgatg
gccggagaggtgggaacggtgatggatgagcagctgcagactctactggtgtctatggtg
gatgctgctgaggggctgtgtcctcatgtgatgaagaggagcagccttcgtcaggaactg
ctgaaggccggcgcggggaggatgactatcccccgcagcttcatcaccaacacgcttctg
gagcagtctggggttgacatcatcaacaagatcagcgaagtgaaactcagcttggcttcg
tttctgtctgatcggattgtggatgagatccttgagtctttgtccggatcacaaaatact
ctggcggatcatctgatcagaaaaggccaaccgctgctgcatcacgacgtccacatggag
acagaagtcttggatgagacggttctacagcaagaaaaccaccagaaagctcaaaaacga
gataaagagcagaaatatggaccggacgagatgcaatccctcacgatgaccccgaaatcc
aagagaaagagcattctggtccgaatgctgagacccgtttccgtggcttttgagatggag
tttgacctggacaaagctctggaagaagttccaatccattatgaggacccgcctcttccc
tctcctcctcctttgcacacatcagacaggatgtcatactttggagatttccctcctact
ccaacagatacaaactctgtctctttgggggagctacctcccgtggagcacaagcctctg
gaaaactgcaccaaattccgaccaaaaccaaaaaggaggaaacccagcagatcaccacgg
caagccactggcctctctgtgccacaggatgcagagcagaacggcatgatgggaaagctg
gatgagggtgtggatgacttcttcaccaagaaagtcacaaaactcagctttaatttcccc
tttgcgagaagtccctccaccattactccagaatcaacagataaaaaacgggaatccagg
aaaagtggcttttttaattacatcaaatctcgagcttctcgctcagaaaagaccactgga
gcttcctccatctcaccacctcatccttcccctacttcttcttccactatcaaccccatc
catgaaataagctctccatcatctcctacacttcctgtgaaatcccccgtcatgtccgtg
gcagaaagtcatccggagctccacagggcacattcctcagaccacacaaatcttgaaaga
gaagctcctctgactgcccccaaacctgttgaagaggaaaaagaggagaagactttggaa
ctaggggaccacctagagaaggctgaacatgcagagaagaaggagaatgtggagaagaag
gagactcctcacgtgcatcgctacattggtgttcctatgatggggaaagacctgctggct
gagatgaaggccagacaaaacagaaccaagcaagaaaaaatcgctgtgaagaaggctgat
tcatcaccaggaacagacgagaaggacacagacaaacccacgtcagatgaccgtcccact
gttaaggtggatcttcatcccacttccaagcttgatctccatcctactattaagtcagat
attcatcccactgtcaagttggaggttgattccacttccaaggtggatctccatcctact
ttcaaggtggatctccatcccacttccaaggtggatctccatcccacttccaaggtggat
ctccatcctacttccaaggtggatctccatcctacttctaaggtggatctccatccttct
tccaaggttgtccatcccactgtcaagtcagaggttgatctcaccaccaaggtggatgtc
catcccgttgtcccagtagacactgaacactccaaaccagagccgattcccaggtccaga
ccaccgagtgtcacccaaaaacaatctccaacccaggccacaaaatcccctctggtacct
cgcacatccggatccctgagtccattaaggcaaaggcctttcagcatctccgttctcgat
gactctgtcgacattcaagttgggagtacgtctcccaaagcgccacttcctgctcctcgc
ctgaagagggcgcagtcagagcaggaccgagggagcgtgagcagcagctcttcaggaccc
ctgtctccactggacgctgtttttccagcggacggcgatgcttttgaccaacccgtcaca
gaactggagcctggctccggcagcagacagtggtcatccctgaagcgatcatccagccct
ccgtcggtcaaggaggacgcccacgaacgcgcaaagtcccttcccacttacgtgaggcta
ccatctcagatggaggctgatctcagtccagctgagggagagattcccactgtgacctct
gacctcaatcctaacaacaaatttgaggacgagtctggagatgaccctccatccatgtga
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integrated database retrieval system
