Nothobranchius furzeri (turquoise killifish): 107394432
Help
Entry
107394432 CDS
T05163
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107394432
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107394432
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107394432
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107394432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
EGF_2
EGF_Tenascin
fn3
hEGF
EGF
Big_5
DUF3811
Motif
Other DBs
NCBI-GeneID:
107394432
NCBI-ProteinID:
XP_015828847
UniProt:
A0A9D3BKF9
LinkDB
All DBs
Position
sgr19:complement(5106681..5156538)
Genome browser
AA seq
2190 aa
AA seq
DB search
MRPLIFLILLFLLTPSTSRELQVRGQMTPRGAEQDTIKVLISEGCNSQGESSDVDQGGKA
IDLTPGSPLVLTHKIKLVPSGSGSGSCSCEEDFAALRERLERLEGEVSNLRAKCGGVERG
CCTSESKGAGCTIKPETEECPNECNDQGRCVDGKCVCFPGYGGPDCSLSSCPGNCNDNGR
CVNGECVCGPGFSGPDCSRTTCSDNCSNQGKCVNGRCVCNSGFAGPSCSEESCPGNCNSK
GRCLNGRCVCNSGFTGPDCTKQACPDNCNTNGRCVDGKCVCYSGFKGPNCSEISCPGNCN
NKGHCVDGQCVCNDGFTGADCSGKVCPNDCNNRGRCNEGKCVCNSGFIGVDCSEVDCPGN
CNKKGRCVNGQCICNDGFTGADCSMKTCPNNCRNHGSCVNGKCVCDSGFAGADCSQIACP
GNCNNKGRCINGQCACNDGFTGADCSEKTCPNNCRNHGRCVNGKCVCDSGFTGADCSEIT
CPGNCNNKGRCINGECACNDGFSGPDCSEINCPGNCNNRGRCINGQCVCDDGFTGADCAE
KACLNNCNSRGRCVNGKCICDVGFAGPDCAFKGCPNNCNNKGRCIRGKCICRRGFSGPDC
GQCQDGMTGTDCNIAMTGVSQLSTRDITESSVTLVWTPPPVQYETYYITFSSQKENDQQI
TSQVEGSLTTFTQTGLAAGQEYSATIVGEISGRRGAESTTEFMTLISGPTNLQVVKTTST
SAVVQWEPSQGQVDRYHLTVTPNDGAGQSQGMIIPPGQTSTHIQQLEAGRLYDVLLVAEK
GLVHSQPATTQVVPGYTFSRVTAEELTIKVMQAPKQDVGGMDQELDPAPKVGAFDQQGGS
NADSVKVGKSSATIVARTKPLVSKMVTQNGTRPRYVGRPTKFTGSFRFNATKVMPGERIH
VPGLRQRIPMMPNKREEIQIEKSTPDVHTSRESMTDPNEEISRFERRDDKNPAVMTGSNT
ETYRQSGSEEPTIGSKSQPDVGFAKKESDMDSVSLMTTGNMQSQDVKCVHECKEEETGLQ
VNTLNSNPSEAPSSGETALNNAPDPLHKLITDTFENMNITTISVHLSRPLNLSVDAEKVS
TQILRGLKPLASISSSSTFRSTSQLSSRSSVAVKPPSLLTYLISSSSPLSDLKSTTSAPP
SSVSSLSPSSSSSSSSSSSSSSSSSISEELDLLGSNELDPITEKLGFIRRPSSNFENKTR
QTLRISHKSPNYLNHTSKKEADVTLPVKDAISNKDAKTSPVPSLIEQRPKTLQRGRANFP
IRHPLRGSHQRQRYSTSQNKTHPNIRHLTQPSQSISPKIDAHKPKSFPTQMPTLSSSFSK
YTHSSDTGPVDEGNEDRVGTKLSNHFHQTTGGRDVAFSRRPTFRQPRLHGQSFQNKTLTI
LRRQYPHGAPTRKFFQTRKQNLGNLNPRSQTNEMDKDSRFQNPHIQSENQNVHRSFQGFP
SIQSGEQGNYLLTQRTITNGQRTAINTQRKELDKGGRPLTEAETGTDPDSHMDKYQPSRN
AAANQGRPVIAPKRKPSSITVTEKLHDTQTNGGLSEKNLPVQSSFATDTELSKGTVPKVS
PPEVTRESLDFVGVTNRTSAGLTLVWDSPQGKNKKLVRSGTESVKREELQKIINTQKQDK
DQQIKVLASNNRDHETWVPDEFVTQAPKTQGSTVSQSTSSAGSSHSEHLPPQTDYTLTLL
GKGPGLLSRLQKLVISTGPEPPSNIVFSKVTENSLTVSWTKPKSPVSGFKVTYIHADEGE
PVSVSVDSEDSTLDLSQLSPGSSYEVSVISTLGLDESDPIKDFVVTLPDPPTDLKAVNVT
DTKALLLWRPALVAVDKYTIVYGAGTGSEIRVTVSGNAAEQQLSGLQGSTTYTVTITSQL
GSLESSPTRTSFTTTSGSMQDTDGAQDLQAKNVTPRTALISWTPSLKPVDRYILVYKAEG
EEPKEIIVGPSITQYKLSRLHPGSLYSVDLRTVRENRLIANTFAKFTTGALRFPFPTDCS
QELLNGILTSDVVEIFPQGRSGKSVMVYCDMETDGGGWTVFQRRKDGSVDFYRGWNDYVK
GFGDLSGEFWLGLEILHNLTTMTKMNLRVDLRDGGETVFAQYSKFSVAKRNYKLTVDEYR
GTAGDSLSYHNNCIFSTKDRDPIPGITRCAISYQGGWWYKNCHAANLNGLYGIDYKHQGV
IWKSWKGKDHSIQFTEMKMRPAAFRIPTRG
NT seq
6573 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccctcatattcctcatcctcctcttcctcctgactccatcaacttccagggag
ttgcaggtcagaggtcaaatgacaccacgaggtgctgagcaggacaccattaaggttttg
atctcagagggatgcaactcccagggagagtcttctgatgtggaccaaggaggcaaagca
atcgacctgactccaggttctcctctggtcctgacccataagatcaaattggttccatca
ggatccgggtctgggtcgtgcagctgcgaggaggactttgctgccctgagagaacgactg
gagaggctggagggggaggtgtctaacctacgggcaaagtgtggaggagtggagagaggc
tgctgcacttcggaaagcaaaggtgcaggttgcacaataaaaccagagacagaggaatgt
cccaatgagtgcaatgatcaaggtcgctgtgtggacggcaagtgtgtttgcttccctggt
tacggtgggcctgactgtagcctgtccagttgtcctgggaactgcaatgacaacgggaga
tgtgtgaatggagagtgtgtgtgtggtcccggtttttctgggcctgactgctctaggaca
acctgttcagacaactgtagcaaccagggtaaatgtgtgaatggcagatgtgtgtgcaac
agtggttttgctggtccaagctgctcagaagagtcctgtcctggaaactgcaatagcaaa
gggcgctgccttaatggacggtgtgtgtgtaattctggattcacaggtccagactgcact
aaacaggcctgtcctgataactgcaacaccaatggcaggtgcgttgatggtaaatgtgtt
tgctacagtggcttcaagggtccgaactgctctgagatcagctgtcctggaaactgtaac
aacaagggccattgtgttgatggacagtgtgtttgtaatgatggtttcaccggtgcagac
tgctccggaaaagtgtgtcctaacgactgcaacaacaggggccgatgcaatgaaggcaaa
tgtgtctgcaacagtggctttattggtgttgactgctctgaagtagactgtcctgggaac
tgcaacaaaaagggacgttgtgtaaatggacaatgcatttgcaatgatgggttcactggt
gctgactgctccatgaaaacttgtcccaacaactgcagaaaccatgggagctgtgtgaac
ggcaaatgtgtgtgtgacagtggttttgctggtgctgattgctcccagattgcctgtcct
ggaaactgcaacaacaaggggcgctgcatcaatggacaatgcgcttgcaatgatggtttc
acaggtgcagactgctcagaaaagacttgtcccaacaactgcagaaaccatgggaggtgt
gtgaatggtaaatgtgtgtgtgacagtggttttactggagctgactgctctgagattact
tgtcctggcaactgcaacaacaaggggcgctgcatcaatggggaatgtgcttgcaatgat
ggcttcagtggtccagactgctctgaaatcaactgtcctggaaattgcaacaacaggggg
cgctgtatcaacggacagtgtgtttgtgatgatggatttactggggcagactgtgcggaa
aaggcttgtcttaacaattgcaacagcagggggaggtgcgtgaatgggaagtgcatttgc
gatgtgggctttgcagggccggactgtgctttcaaaggctgtcccaacaactgcaacaac
aaaggacgttgcatcagagggaagtgtatatgccgacgtgggttcagtggaccggactgc
ggccagtgtcaagatggcatgactggaaccgactgtaacatcgcaatgacaggtgtttcc
cagctgagtactcgagacatcacagagtcatctgtcactttggtttggactccacctcct
gttcagtatgagacctactacatcaccttctccagccagaaagagaatgaccagcagata
acctcacaggtagaaggaagcctgaccacattcacccagacgggcctggcagctggtcag
gagtacagcgccacaattgtgggagagatcagtggcaggaggggcgctgagagcacgact
gaattcatgaccttaatctctggtccaaccaacctccaagttgtcaagacaacttccaca
tcagcagttgttcaatgggaaccgtcacaggggcaggttgacaggtaccatttgaccgtc
acacccaatgatggagcagggcagagtcaaggaatgatcataccacctggccaaacctca
actcatattcagcagctggaagcgggacgtttgtacgacgtcttgctggtggcggagaag
ggcctggtccatagccagccagctaccacccaggtagtacctggttacactttctcaagg
gttactgcagaggagctgaccatcaaggtcatgcaagccccaaaacaagatgttggcggt
atggaccaagaattggatccagcgcccaaggttggagcatttgaccagcagggtgggagc
aatgctgactctgtaaaagtcgggaagtcttcagcaactatagtagccagaactaaacca
ctggttagcaaaatggtgacacaaaatggtacaagacccagatatgtgggaaggcctaca
aaattcacaggctcttttcgtttcaatgcgactaaggttatgcctggagaacgaattcat
gtgcctggtcttagacaaagaatcccaatgatgccaaacaagagagaggagattcaaatt
gaaaaatctactccagatgtccataccagcagggagtctatgacagaccccaatgaggag
atctcacgctttgagagaagagatgacaaaaacccagctgtaatgacgggcagtaacact
gaaacataccgacaaagtggctcagaggaaccaactatcggctcaaagagtcaaccagat
gttggctttgcaaagaaagaaagtgacatggattcagtgtctctgatgacaactgggaat
atgcaaagccaagatgtaaaatgtgtgcacgagtgcaaggaagaggaaacggggttgcaa
gtaaacacattaaactccaatccaagtgaggcaccctctagtggagagacagctctcaac
aatgcaccagatcccttacacaaactcataaccgatacttttgaaaacatgaatatcacc
acgatctcagttcacctgtccagacctttaaacctttcagttgatgcagaaaaggtgagc
actcagattttaagaggactaaagccactggcctcaatctcatcctcgtcaaccttccga
tcaacctcacaattatcatctcgctcatctgttgcagttaaaccaccatccttactaacg
tatttgatttcatcctcatcacctctctcagatttaaaatcaactacttcagcaccacct
tcatcagtctcctctttatcgccatcatcatcatcatcatcatcatcatcatcatcgtca
tcatcatcatcatccatttcagaggaattggatttacttgggagcaacgaacttgaccct
atcactgaaaaactgggtttcatacgtcgtccatcctcaaactttgaaaataaaactcgt
caaactctgagaatttctcacaaatcccccaattatttgaatcacacctcaaagaaagag
gcagatgtaactttacctgtaaaagatgcaatcagcaacaaagatgcaaaaacatcacct
gtaccctctttgattgaacaacgccccaaaactttacagaggggaagagcaaatttccct
atccgacatcctctaaggggtagtcaccaacgtcagcgttattcaacttcccagaataaa
acccatcctaatatacggcacttgactcagccatcccaatcaattagtcctaaaatagat
gcacataaaccaaaatcatttcccactcaaatgccaaccttgtcttcttctttttctaaa
tatacccattcatctgacactggtccagtagatgaaggaaacgaagacagggtagggaca
aagctgtccaatcatttccatcagaccactggggggagggacgtggctttttctcgtcgc
ccgaccttccgtcaaccacgtctacatggtcagtcttttcaaaacaaaactcttacaatc
ttgagacgtcagtatccacatggagctcctacacgcaagttcttccaaactagaaagcaa
aatctgggcaacttaaatcccagaagtcaaacaaatgaaatggataaagacagtcgcttt
caaaaccctcatatacaatctgaaaaccagaatgtccacaggtcttttcaaggtttccca
tctattcagtctggagaacagggaaattacctcttaacccaaagaaccatcacaaatggc
caaagaactgccatcaacacacagagaaaagagttggataaaggaggcagacctctgact
gaagcagaaacaggcaccgatcctgacagccacatggacaaataccagcccagcaggaat
gcagctgcaaatcaaggtaggccagtcatagcacccaagagaaaaccttcatcaataacc
gttacagaaaaacttcatgacacccaaacaaatggtgggctttcagaaaaaaatcttcca
gtgcaaagttcatttgcaactgacactgaattgtcaaaaggaacggtgccaaaagtttct
cctcctgaagtcacaagagaatctctggactttgtcggagtcacaaaccgcacatcggct
ggattgacactggtatgggactcaccgcaaggaaagaacaaaaagttagttcgtagtgga
actgaatctgtgaaacgtgaagagttacaaaagatcataaatacacaaaaacaagataaa
gatcaacaaatcaaagtgttagcatcaaataacagagaccatgaaacctgggtgcctgac
gagtttgttactcaagccccaaaaacccaaggtagcacagtgtcccaatcaacaagcagt
gccggctcttcccactctgagcatctgcctccgcagacggattacaccttgaccttgctt
ggaaaaggtcctggccttctgtccagactgcagaagcttgtcatcagtacaggcccagag
cccccatctaacatcgtattcagtaaggtgacagaaaattctctgacagtgtcttggacc
aaaccaaaaagtcctgttagcggtttcaaagtcacatacatccatgcagatgaaggtgaa
ccagtttcagtgtcagtggactctgaggactccaccctcgacttgtctcagctttctcct
ggatcctcatatgaggtcagcgttatctccaccctcggattggatgagagcgatcctatc
aaagactttgtcgtgactctccctgaccctcccacagacctgaaagcagtgaatgtcact
gacaccaaagctttgttactgtggcgtccagctctggttgctgttgataagtacaccatt
gtctatggtgcaggtacaggttcagagatcagggttaccgtttctggaaatgcagctgag
cagcagctgagtggtctgcaagggtccaccacttacaccgtcaccatcaccagtcagctg
ggcagcttagagagttcacccaccagaaccagcttcaccaccaccagtggctccatgcag
gatacagatggagcacaagaccttcaggccaagaacgtcacccctcgcacggctctgata
tcttggacaccatcattgaagccagtagatagatacatactggtctacaaagctgaagga
gaagagccaaaggaaatcatcgttggacccagcataactcagtataagctgagccgactt
catcctggctccttgtacagtgtggacctacggacagtaagagaaaaccgactgatagcc
aacacgtttgccaaattcaccacaggagcactaaggttccccttccccaccgactgctcc
caggagctgctgaatggcatcctcacttcagatgtggtggagatctttcctcaggggaga
tctggaaaatcagtgatggtgtactgtgacatggagacggatggtggcggttggacggtg
ttccagaggaggaaggacggctcggtggatttctaccgaggctggaacgattatgttaaa
ggatttggagatctgagtggagagttctggcttggtcttgagattctccataacttgaca
acaatgacgaagatgaatctacgagttgacctacgagacggaggggagactgtgtttgct
cagtattcaaagtttagtgtggccaagaggaactacaaactgaccgtggatgagtaccga
ggaacagcaggagattctctgagttaccacaacaactgcatcttctcaaccaaagacaga
gacccgataccggggatcactcgctgcgccatttcctaccaaggaggctggtggtacaag
aactgccacgcagcaaacctgaacggcctctacggaatcgactataaacatcaaggtgtg
atctggaagtcatggaaaggtaaagaccactccatccagttcacggagatgaagatgaga
cctgcagccttcaggattccaaccagaggatga
DBGET
integrated database retrieval system
