Nothobranchius furzeri (turquoise killifish): 107394525
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Entry
107394525 CDS
T05163
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107394525
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Others
Others
107394525
Endosome - Lysosome transport
107394525
Endosome - Golgi transport
107394525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
107394525
NCBI-ProteinID:
XP_015828986
UniProt:
A0A1A7ZEE1
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Position
sgr02:complement(22851353..23513430)
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AA seq
1207 aa
AA seq
DB search
METRAGSCPGSRLVSLGIWVLIAAHTLPTARAEISCVSCPLPVQLNREEMQPGARDLRSI
RLEFRELGITDQDLGTDREHSEGVSREDALQFHRSLDEVPLGDTPEDPALRRAKRSEFDD
LSNGGWTGAAGVDAGAPEDRGSNGQRSGRSEYRWNKDDGRGNNRQDEPKLSSSTFSLTGD
SAHNHAVVYWSGRNSSVILILTKLYDFHMGSVTESTLWRSTDYGSTYERMNDKVGTKTLL
SYLYVCPSNQKKIMVLTDPEFESSVLISTDEGASYQKYRLSFFILSLLFHPMEEDWALAY
SHDQKLYSSVDFGRKWQLIHEHVTPNRFYWSVAGLDKEPDLIHMEAHTPDGNVQYVTCRA
QTCTEANRNYPFPGYIDISSLVVQDDYIFIQVPTSGRATYYVSYKRDSFIQIKLPKYSLP
KDLHIVSSDEKQVFAAVQEWNQNDTYNLYLSDTRGIFFTLAMENVKTTRGIGGNQMLDLY
EVAGIKGMLIANKRQDNQVKTYITYNKGRDWRLLQAPATDLDGNDIHCILPFCSLHLQLH
GSENPYVSGAISSKSSVPGIIVATGNIGPELSYNNVGMFITSDAGNSWRPIFEEEHNIWF
LDKGGALVAVKQPSVSTRHLWVSFDEGRQWTQHSFSSVPLFVDGVLVEAGAQNQIMTFFG
HFSHRSEWQLIKIDYKSIFSRKCTEEDYQTWHLHNQGEPCVMGQKQIFMKRRPGNYCMLG
KDYSRILSAESCICRAHDFECDYGYERRSDGNCRASFWFNPSTVSRSCSQGQNYFNSTGY
RKVVLNNCTKGVKDMYSARKQQCPNRPPKGLVLTSKDGKLTASMGSNVTFLVRLDEGDSM
RTNIQLEFGDGTAVSYSNLSWTEEGIKHIYKSAGLFRVTALAENTLGYDTTTLFLHVTCP
VEHVQLLAPFVIIRNKEVNISAVVLPSQSRTVTYFWWLGNNTEPVITLDGSISHTFTSEG
VHTITVQVSAGSSILQDTRSLVVKEFFKSLLLSFSPNLDEFNPDIPEWRQDVGRVIKKAL
LRVSDFPEEHLLVAVFPGVPTAAELFLVPNKNQSDDRKKCEEELEKASSVIVTALNQNLV
EFELKPGVRVIVYNTQLTLAPLVDSSPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWI
NIYAEVNQEKEQEMIGSVGQSDSTPKITLSEFTTSKELMEKELDARVKRGVGNACESTRE
IPNCTSV
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggagactcgggctggctcgtgcccaggctcgcgcctcgtgtctctgggtatctgggtg
ctgatcgccgcgcacaccctgccaacagccagagcggagatcagctgcgtctcctgcccg
ttgcctgttcagcttaaccgggaggagatgcagccgggagcgcgcgacctaaggagcatc
cgacttgagttcagggagctcgggattaccgatcaggacctcgggacggacagggaacac
agtgagggtgtttctagggaggacgctctgcagttccatcgcagtttagatgaagttccg
ctcggggacacaccagaagaccccgcgctccggagagccaaaagaagcgagtttgacgac
ttaagcaacggcgggtggaccggtgccgctggcgtggatgcaggcgcgccggaggaccgg
ggctctaacgggcagaggtctggaaggtccgagtacaggtggaacaaggacgacgggaga
gggaataaccggcaggacgagcccaaactgagcagcagcaccttctctctgacgggggac
tccgcgcacaaccacgcggtggtttactggtccggacggaacagcagcgtgatcctgatc
ctcactaaactgtacgactttcacatgggcagcgtcacagagagcacgctttggagatcg
actgactacggatccacctatgagaggatgaacgataaagttggaacgaagaccctcctc
agttatttatacgtgtgtccatccaaccagaagaagattatggtgctgacagatccggag
tttgaaagcagcgtgctcatcagcactgacgagggtgccagttaccagaagtaccgcctc
tccttcttcatcctcagtctgttattccacccgatggaggaggactgggccttagcttac
agccacgaccagaagctgtacagctcagtagactttgggagaaaatggcagctcatccac
gaacacgtcaccccgaacagattctactggtcggtggcaggactggacaaagaacccgac
ctgatccacatggaggcgcacacgccagatggaaatgtgcagtatgtcacatgcagagct
cagacgtgcacggaagctaacaggaactacccgttcccgggatacatcgacatcagctct
ctggtggttcaggacgactacatcttcatacaggttcctacttcaggacgggcgacctat
tacgtgtcgtacaagagagactcatttattcaaatcaaactgcccaaatattccctgccg
aaggatttacacatcgtcagctcggacgagaagcaggtattcgcagcggtgcaggagtgg
aaccagaacgacacctacaacctctacctgtccgacaccagagggatcttctttaccttg
gccatggagaatgtcaaaaccaccagaggcatcggtggaaaccagatgctggacctgtat
gaggtggccggaatcaaagggatgctaatcgctaacaagaggcaggacaaccaggtgaag
acctacatcacatacaacaaaggccgggactggaggctcctgcaggctcccgccaccgac
ctcgacgggaacgacattcactgcatcctgcctttttgttcccttcatctgcaactgcac
ggctccgagaatccttacgtgtctggagcgatctccagtaagagctcagtgcctggtatc
atcgtcgctacaggaaatatcggaccggagctctcctacaacaacgtcggcatgttcatc
acatcagacgcaggaaacagctggaggccgatttttgaagaggagcacaacatctggttc
ttggacaaaggcggagctcttgttgctgtaaagcagccgtctgtttcaaccagacatctg
tgggtcagctttgacgaggggaggcagtggacccagcacagtttctcctccgtgccgttg
ttcgtggacggagttctggtggaggctggagctcaaaaccaaattatgaccttttttggg
cacttcagtcaccgctctgagtggcagctcatcaagatagactacaagtccatcttcagc
aggaagtgcacggaggaggactaccaaacatggcacttgcacaaccagggcgagccgtgt
gtgatgggtcaaaagcagattttcatgaaacgcaggccaggaaactactgcatgctggga
aaggactactccagaatcctctcagctgagtcctgcatttgccgagctcatgactttgag
tgcgattacggctacgagaggcgcagcgatggaaactgccgagcgtccttctggttcaac
ccctccaccgtgtccagaagctgcagccagggtcagaactacttcaacagcacagggtac
cgtaaagtggtgttgaacaactgcactaaaggagttaaagacatgtacagcgccagaaag
cagcagtgtcccaacagacctccgaaaggactcgtgctgactagcaaagacgggaagctc
accgccagcatgggcagtaacgtcaccttcctcgtgcgtctggatgagggcgactccatg
cggaccaacatccagctggaattcggcgatggcacggccgtctcgtactccaacctgagc
tggaccgaggagggaatcaaacacatctacaagtccgcaggactatttcgtgtcacggcg
ctggcagagaacacgctgggctatgacactaccacgctgttcttgcatgtcacctgtccg
gtggagcacgtccagcttctcgctccctttgtgatcattagaaacaaggaggtgaacatc
agcgcggtggtccttcccagccaatcacgcaccgtcacctacttctggtggcttggcaac
aacacagagccggtgataacgctggatgggagcatttcacacaccttcacgagcgagggc
gttcacaccatcaccgtccaagtgtccgccggcagcagcatcctgcaggataccaggagc
ctggtggtgaaggaattcttcaaatctctacttttatctttctccccgaatctggacgag
ttcaaccccgacattcccgagtggaggcaggatgtggggagagtaattaagaaggctctt
cttcgagtgtccgacttccccgaggagcaccttctggtcgccgtgtttccaggagttcca
acagctgcagagctcttcctggtacccaacaagaaccaatcagatgacaggaaaaagtgt
gaggaagagctggagaaggcctccagcgtcatcgtgacggccctgaaccagaacctggtg
gagtttgagctgaaacccggagtcagagtcattgtgtataacacacagttaacactggcg
ccgctggtggactccagccccagacacagcagctcggcgatgctcatgctcctctccgtg
gtgttcctgggcctggccgtcttcctgatctacaaatttaaaagaaaaatcccttggatc
aacatttacgctgaagtgaaccaggagaaggagcaggagatgattggctcggtgggtcag
agcgacagcacgccgaaaatcactctgagcgagttcaccacatccaaagaactcatggag
aaggagctggatgccagggtcaagagaggagtcgggaacgcctgcgagagcacaagggag
attcctaactgtactagcgtgtag
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