Nothobranchius furzeri (turquoise killifish): 107394724
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Entry
107394724 CDS
T05163
Symbol
tdp2
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107394724 (tdp2)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
107394724 (tdp2)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
UBA_4
UBA_8
Exo_endo_phos2
TAP_C
Motif
Other DBs
NCBI-GeneID:
107394724
NCBI-ProteinID:
XP_015829286
UniProt:
A0A1A8URJ4
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Position
sgr19:16694666..16700852
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AA seq
357 aa
AA seq
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MASSSDTHQPSVSDVEKDRTRLCEEFASITGNHSDVAQCYLAENDWQMERALNSFFEADM
ERVFEEDFEENDTPKKKQKVEKTPPEDCIDLTKDSPAAQKPTDEDDNKLSLMSWNVDGLD
SDNLQERARGLCSFLVLYTPDVVFLQELIPPYVHYLKKRAVSYLIIEGGEDEYFTGIMLK
KSRVKFLECEIVTYPTTQMMRNLLVAQVTFKGQKLCLMTSHLESCKGYAGERMKQLQLVM
QRMKEAPEDVNVLFGGDTNLRDTEVAKVGLPSGVCDVWERLGRQEHCRYTWDTKTNNNKS
FSFVSRCRFDRIFLRPATKEGVPRLYPDHMALVGLEKLDCGRFISDHWGVYCSFPAE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcgtctgacacccatcagccgtctgtttctgatgtggaaaaagacagaacg
cgcctctgtgaggagtttgcttccataacgggtaaccacagcgacgtcgcgcagtgctac
ctggctgagaatgactggcagatggagagagctttgaactcattctttgaggcagacatg
gagagagtatttgaggaagattttgaggaaaacgacactcccaaaaagaagcaaaaagtt
gagaaaacccctccagaagattgcatagatctgactaaagacagccccgctgctcaaaaa
cctaccgacgaggacgacaacaaactgtccctgatgtcctggaacgtagacgggctcgat
tcagacaacctacaggaacgcgccagaggcttgtgctcctttttagtcttatacactcca
gacgtggtgttcctacaggagctcatcccgccttatgtccactacctgaagaaacgggct
gttagctacctgatcattgaaggcggtgaagacgagtacttcacagggatcatgctgaag
aagtcgcgagtcaaattcttggagtgtgagatcgtaacgtaccccacaacacagatgatg
agaaacctcctcgtagctcaggtgacttttaaaggccagaagctgtgcctgatgacctct
caccttgagagttgtaaaggctacgcaggagaacggatgaaacagctgcagctggtgatg
cagaggatgaaagaggctccggaggacgtcaacgtcctgtttggtggagacacgaacctg
agggacactgaagtggccaaagtgggtcttccttcgggcgtctgtgacgtgtgggagcga
ctcggcagacaggagcactgccgctacacctgggacaccaaaactaacaacaacaagtcc
ttttccttcgtcagccgctgccgcttcgaccgcatcttcctccgtcccgctaccaaagaa
ggagtcccgcgtctgtaccccgatcacatggccctggtggggctggagaagttggactgt
ggccgtttcattagtgaccactggggggtttactgcagcttccctgctgagtag
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