Nothobranchius furzeri (turquoise killifish): 107394795
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Entry
107394795 CDS
T05163
Symbol
pdcd6ip
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03250
Viral life cycle - HIV-1
nfu03272
Virion - Hepatitis viruses
nfu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107394795 (pdcd6ip)
03272 Virion - Hepatitis viruses
107394795 (pdcd6ip)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107394795 (pdcd6ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107394795 (pdcd6ip)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107394795 (pdcd6ip)
Membrane trafficking [BR:
nfu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
107394795 (pdcd6ip)
Exosome [BR:
nfu04147
]
Exosomal proteins
Proteins found in most exosomes
107394795 (pdcd6ip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
SCAB-ABD
JIP_LZII
COG3_N
Motif
Other DBs
NCBI-GeneID:
107394795
NCBI-ProteinID:
XP_015829379
UniProt:
A0A1A8A1G8
LinkDB
All DBs
Position
sgr19:18677158..18693740
Genome browser
AA seq
882 aa
AA seq
DB search
MASFISVPLKKSSEVDLVKPLSKFVTASYPSGEEQAEYLRAVEELNKLRKNALGRPLDKH
ESSLEILLRYYDQLCAIEPKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLSLASLGYEKT
CVLFNCAALASQIAAEQNVDNDECLKAAARFYQLASSAFSHIKDTVLSALNREPTMDICP
ETVSTLSSIMLAQAQEVFFLKATSDKMKDAVIAKLANQAADFYGEAFKQCQYKDTLPKYF
YFQEVLPVLAAKQGIMQASAELHQSILAKQKKHFGEEIARLQHAADLLKTVRSRYDEYVS
VKDLAEKINRALNAAKKDNDFIYHDRVPEVKDLEQIGKAALVKATAITPPLSQKFTDLFE
KMVPMAVQQSMSIYSQRKAETVNRLVGAMREATNLCNGVLASLNLPAALEDLSGDSIPQS
IAEKSKSIVGQGGLQSIEKLIKDLPELLTRNREILDESLKMLDDEETTDNELRTKFSQRW
NRTPSGDLYKPLRAEGSNFRNILDKAVQADQVVRDRYNTQCDMIALLCKPENELTAAIPS
ANPTKTLQGSEVVNVLRSLLAQLDEMKREREVLEGEIKAVTFDMSTAFLKALAQDGAINE
EQLSVSQLDQLYGSYNQKVQASLHRQEELLGQVQTSHQEFASLKQSNSEANQREEVLKKL
ASAHDSYVEICSNLREGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKELQQSIARE
PSAPSFSVPAYQSNPGAPTPVPGPTPAPRTVFQPQQAPQKPQAPARPPPPSFNPQAASTP
PTGSTAVGPPPTNNPPPVAPTSQAQGPPYPSYQGYPGFYQMPMGFNPYAYGQYNMPYMPY
QAAPGQGGYPGAPPAGPSYPGYPQQQPPQQQPPQQQPYYPQP
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtttatttcagtcccgttgaaaaagtcctccgaagtagatctggtgaagcct
ctgtcgaagtttgtcacagcctcgtacccatcgggcgaggagcaggcggagtatctccgt
gctgtggaggagttgaacaagctccgcaagaacgcgctgggaaggccgttggacaaacac
gaaagctccctggagatcctactgcgatactacgatcagctgtgtgcaatcgagccgaag
tttcccttctcagaaaaccagctctgcttgactttcacatggaaggatgcttttgataaa
ggctctctgtttggaggctccgtcaagctctctttggccagtttgggctacgagaagacg
tgcgtgttgtttaactgcgccgccctggccagtcagatcgctgccgaacagaacgtggac
aacgacgagtgtctcaaggctgctgctagattctatcagttggccagcagcgccttcagt
cacattaaggacacggtcctgtcggccctgaacagagagcccaccatggacatctgcccc
gagaccgtcagcaccctgagcagcatcatgctggctcaggctcaggaggtcttcttcctc
aaagccacatcagataagatgaaagacgccgtgattgcaaaactggccaatcaggcggca
gatttctacggcgaagccttcaagcagtgccagtacaaagacacgcttcctaaatatttt
tattttcaggaagtgctgccggtgctggcggctaaacaaggcatcatgcaagccagcgcc
gagctgcaccagagcatcctcgccaaacagaagaagcattttggagaggagatcgctcgt
ctgcagcacgcagcagatctgctgaagaccgttaggtctcgttacgacgagtatgtgagc
gtgaaggacctggctgagaagattaaccgagctctcaacgcagccaagaaggacaacgac
tttatctaccacgaccgagtccccgaggtcaaagacctggagcagatcggcaaggcggca
ctggtgaaggctaccgccatcacacctccactcagccagaagttcacagatttgtttgag
aagatggttcccatggccgtgcagcagtccatgagcatctacagccagaggaaagcagag
acggtgaacagactagtgggagccatgagggaggccaccaatctctgcaacggggtgctg
gcgtctctcaaccttcctgctgctttggaggacctgtcaggagacagcatcccacaatcc
atcgctgagaagtccaaatcgatcgtgggacagggaggtctgcagagcatcgagaagttg
atcaaagaccttcctgagcttttaactcgtaacagagagatcctggacgagtctctgaag
atgctggatgatgaggaaacaacagacaacgagctgagaaccaagttcagccagcgctgg
aacagaaccccatctggagatctctacaagccccttcgtgccgagggctccaacttccgt
aacatcctggacaaggcggtgcaggccgaccaggtggtgagggaccgctacaacacacaa
tgcgacatgatcgccctgctgtgtaaacccgagaacgagctcaccgccgccatcccctcc
gccaacccgaccaagacactacagggcagcgaggtggtgaacgtgctgcgctcgctgctc
gcccagctggatgagatgaagagggagagggaggtcctggagggagagatcaaggccgtg
acgttcgacatgtccaccgccttcctgaaggcgctggcccaagacggcgccatcaacgag
gagcagctgtccgtgtcgcagctcgaccagctgtacggcagctacaaccaaaaggtgcag
gccagcctccacaggcaggaggagctgctgggacaagtgcagacgtcccaccaggagttc
gccagcttgaagcagtccaacagcgaggccaaccagagggaggaggtcctgaagaagctg
gcgtcagcccatgacagctacgtggagatctgcagcaacctgcgcgagggcaccaagttc
tacaacgacctgacggagatcctgctcaagttccagaacaaatgcagcgacatcgttttt
gctcgtaagaccgagcgcgacgagctgctcaaggagctgcagcagagcatcgctcgggag
cccagcgctccctccttcagcgtcccggcctaccagagcaacccgggtgcccccacccca
gtccccggtccaactcctgctcccagaacagtcttccagcctcaacaagccccgcagaag
ccccaagcccccgccaggcctcctcctcccagcttcaaccctcaggcggcatccacccca
cccaccggctccacagccgttggcccaccccccaccaacaacccaccaccggttgctccg
acctcccaggcccagggaccgccgtacccgtcctaccagggctacccaggcttctaccag
atgcccatgggcttcaacccgtatgcttacggccagtacaacatgccctacatgccttac
caagccgcccccggacagggaggataccccggagctcctccagctggaccatcctacccc
ggttacccccagcagcagcccccccagcagcagcccccccagcaacagccctactaccct
cagccgtaa
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