Nothobranchius furzeri (turquoise killifish): 107394797
Help
Entry
107394797 CDS
T05163
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107394797 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nfu04812
]
107394797 (clasp2)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
107394797 (clasp2)
Cytoskeleton proteins [BR:
nfu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
107394797 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
HEAT_DAAF5
ParcG
MMS19_C
Motif
Other DBs
NCBI-GeneID:
107394797
NCBI-ProteinID:
XP_015829382
LinkDB
All DBs
Position
sgr19:18598015..18652484
Genome browser
AA seq
1544 aa
AA seq
DB search
MEEYDNMDYFYQQVLQKDVTRRLQVGQDLIDYLNDPHRSPDVEQDKPRLDKTIDEVTGWV
NSSNFKVALLGMDICGAFVDRMGERFKGYLGTVLPALVDRLGDAKDQVRENSQALILRCM
DQTTSPMYVWERLLPGFKHKNFRSREGICLCLSATLATYGSQPLSLSKLVPHLCTLTEDQ
NPQVREASITALVDVYRHVGERVRADLGKRGLPAARLQTIFARFDEALNSGNMALSPSHD
RSFEDNDSVDGRSSSGFKVPKVPKKPAETSAARRPSATGSKLVSKESAGAVDEEDFIKAF
TDVPTVQIYSTRDLEDNLNKIREICSDDKHDWDQRCNALKKIRSLLVAGAAGYDCFYQHL
RLLDGAFKLSAKDLRSQVVREACITVAHLSSVLANKFDHGAEAIVPVLFNLIPNCAKVMA
TSGVSAIRIIIRHTHVPRLIPLITSNCTSKSVAVRRRCYDFLDLLLQEWQTHSLERHTAV
LVESIKKGIRDADSEARVEARKAYWGLRNHFPADADALYNSLESSYQRTLQSCLKSSGSV
ASLPQSDRSSSSSQESLNRPLSSKWSANPGRVTAGSKAGMTPVSLQRSRSDVDVNAAALA
KRRHVGQAGGAGRLPPGSYSSLDDASDKTDGRVRAKQPLTTASSISSQVDSRGRSRTKMV
SQSQRSDESDCTPGSQSANTVGAGSRSGSPGRVLTTTALSTMSSGTHRVLGGTAGDGRRR
SRIPRSQGCSRDSSPTRLSVAPSSLSSNYNGASRGARGSRIPRPSMSQGCSREASRESSR
DTSPVRSFTPLATRSYSRSTGALHTPDAFGAAGSGFGISQSSRLSSSVSAMRVLNTGSDV
EEALADALLLGDMRSKKKPARRRYENYSMYSDDDANSDASSACSERSYSSRNGGAIPTYM
RQTEDVAEVLNRCASANWSERKEGLLGLQALLKSQRTLSRVELKRLCEIFTRMFADPHSK
RDSGRVYGTAESGISSASFKRVFSMFLETLVDFIVVHKEDLQDWLFVLLTQLLKKMGADL
LGSVQAKVQRALDVTRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILRYIETLTLQMEA
PDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLAALPKTFQD
GATKLLQNHLKNTGNAAQAQMGSPLTRHTPRSPASWSSPVTSPTNTSQNTPSPSAFDYDT
ENMNSEDIYSSLKGVTEAIQNFSVRSQEDMNEPVQRREGEEGGSGTERDVMDGGRMALDN
KTSLLNTPLLSSSPRLAREHFSDSPFKHGRKDASLDDSELLADDSGLDQSELVAELLKEL
SNHNERVEERKAALYELLKLIRENTLQVWDEHFKTILLLLLETMGDREHVIRTLALRVLR
EILGKQPWRFKNYAELTIMKALEAHKDPHKEVVRAAEETAAMLALSISPEQCIKVLCPII
QSADYPINLAAIKMQTKVVERIPREGLISMLPEIVPGLIQGYDNSESSVRKACVFCLVAL
YAVIGEDLKPHLSQLSSSKLKLLNLYIKRAQSGSSGGEPSSEGL
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtatgacaacatggactatttttaccagcaggtactgcagaaagacgttaca
cgtagactgcaggtcggacaggacctgatagattacctgaacgacccgcatcgctccccg
gacgttgagcaggacaagcctcggctggacaaaaccatagacgaagtaacgggatgggtg
aactcgagcaacttcaaggtggcgttgttggggatggacatctgtggtgcgttcgtggat
cggatgggagagcgcttcaaaggataccttggcacagtgttgccagctctggtggacagg
ctgggcgatgctaaggatcaggtcagggagaacagccaagcgctcatcctccgctgcatg
gaccagaccacgtcccccatgtacgtttgggaaaggctgcttcccgggttcaaacacaaa
aacttccgctctcgagaaggaatctgcctgtgtctcagcgccacgctcgccacgtatgga
tctcagcctctcagtctcagtaaattagttccacatctttgcactctgactgaagaccag
aatccacaggtacgcgaggcctccatcacagcgctggtggatgtttatcgtcacgttggg
gagcgagtccgagcagacctgggaaaaagaggacttccagctgcacggttacagacgata
ttcgctcgctttgatgaagccttgaactcaggcaacatggctctcagcccgagtcacgat
cgtagttttgaagacaacgacagcgtggacggacgctcctcctcggggttcaaggttccc
aaagttcccaagaagcctgcagagacgtctgccgcacgccggcccagcgccaccggcagc
aagctagtttccaaggaaagtgctggagctgtggacgaggaggactttattaaagctttt
acggatgtccctactgtgcagatttactcaacacgagaccttgaagacaaccttaataag
attcgtgagatttgctctgacgacaaacacgactgggaccagagatgcaacgctctgaag
aaaatccgctccctgctggtggcgggcgcagccggctacgactgtttttaccagcatcta
cggcttcttgacggagcttttaaactgtctgctaaggacctgcgctcacaagtggtccga
gaagcctgcatcactgtggcccacctctcgtcggttctggcaaataaatttgaccacgga
gcagaagcaattgtgcctgttctgttcaacctcatcccaaactgtgccaaagttatggcg
acctctggtgtctcagctatccgcattattatacgacacacccacgtccccagactgatt
cccctcatcaccagtaattgcacatccaagtctgtagcagtaagaagacgctgttatgat
ttcttggacctcctgctacaagaatggcaaacccactcgttagaaaggcacacggcagtt
ttggttgaaagtattaaaaagggaatcagagatgctgactcagaggctagagtggaggcc
cgcaaagcctactggggtctgaggaaccacttcccagcagacgccgacgctctttacaac
tccttggagtcgtcctaccagcggacgctgcagtcctgcctgaagagctccgggagcgtg
gcctctcttccccagagcgatcgctcctcatcttcgtctcaggagagcctgaaccgtcct
ctgtcttccaaatggtcagcaaatccagggcgagtcactgccggttcaaaggctgggatg
acgccagtctccctgcagcgttcccgcagcgacgtagacgtaaacgcagcggccctagct
aaacgccggcacgtcggacaggctgggggagcgggccgtctgccccccggctcctactcc
tctctggatgatgcctctgataaaacggatggccgcgttcgcgccaagcagcctttgacg
acagccagcagcatctccagccaggtggactcacgaggacgcagccgcaccaagatggtg
tcccagtctcaacgttccgacgaatccgattgcacaccaggatctcagtctgctaacact
gttggtgccggcagtcggagcggctctccgggacgagtgctgacgacgacggcgctgagc
accatgagctccgggacccacagggttctgggtgggaccgccggggacggacgcagacgc
agccgcattccccgcagccagggctgctccagagactcctcgcccactcgcctgtctgtc
gctccttctagccttagttccaactacaatggcgcaagcagaggagctcgaggcagccgt
atccctcggcccagtatgagtcagggctgcagcagggaggccagccgggagagcagccgg
gacaccagccccgttcgctccttcacacctctggcgacacggagctactcccgctccact
ggagctctccacacacctgatgcatttggtgctgcagggtcaggcttcggcatcagtcag
tccagtcgtctctcctcttcggtcagcgccatgagggtcctcaacaccggctcagacgta
gaagaagctctggcagacgctctgctgttgggagacatgagatctaagaagaagccagcg
cggcggcggtatgagaactacagcatgtattcagacgacgatgctaacagcgatgcgtcc
agcgcctgttcagagaggtcctacagctccaggaacggaggagccatccccacctacatg
aggcagacggaggacgtggccgaggtgctcaaccgctgcgccagtgccaactggtcagag
aggaaggagggtttattaggcctacaagctctgctgaagagccagcgcacactcagtcga
gtagagttaaagaggctgtgtgagatcttcaccaggatgtttgcagaccctcacagtaag
cgagactccggcagggtgtacggcaccgcagaatccggtataagctcagcctccttcaag
agagtgttcagcatgttcttggagactctggtggacttcatcgtggtccataaggaggac
ctgcaggactggttgtttgtcctgctcacgcagctgctgaagaagatgggagctgacctg
ctgggctcggtgcaggccaaagttcagagagctctggatgtcacaagagaatcgtttcca
aacgacctccagttcactattctcatgaggttcacggtggaccagacacagacgcccaac
ctcaaggtgaaagtggctatcctaaggtacattgagacgttgacactacagatggaagcg
ccggactttgtgaactccagtgaaacccgactagccgtctcccgcatcatcacctggaca
actgaacccaagagctccgatgtcagaaaggcggcccagtcggtgctgatctccttgttc
cagctcaacactcccgagttcaccatgctgctggcagcgctccccaaaaccttccaggac
ggagccaccaagttgcttcagaatcacctgaagaacaccggaaatgctgcacaggctcaa
atgggcagcccgctgacgcgccacacccctcgatctccagccagctggtccagtccagtc
acctcgcctacgaacacttcccagaacactccttcaccaagtgcatttgactatgacaca
gaaaacatgaactcggaggacatctacagctctctgaaaggtgtcacagaggccatccag
aacttcagcgtccgcagccaagaggacatgaatgaaccggttcagcggcgagaaggagag
gagggtggcagcgggacagagagagatgtgatggacggtggccgcatggctctagacaac
aagacctccctcctcaacacccccctgctctcctccagcccccggttagcccgcgagcac
ttctccgactcccccttcaaacacggccgcaaagacgccagcctggacgactccgagctg
ctcgccgacgacagcggcctggaccagtcggagctggtggccgagctgctcaaagagttg
tccaaccacaacgagcgcgtggaggaaaggaaggcggcgttgtacgagctgctgaagctg
atccgtgaaaacaccctgcaggtgtgggacgaacacttcaagaccatcctgctgcttctg
ctggagaccatgggcgacagagagcatgtgatccgaacactggctctgcgggtgctgagg
gagattcttggtaagcagccttggaggttcaagaactatgcagagctcaccatcatgaag
gccctggaggctcacaaagatcctcacaaagaggtggtacgtgcagcggaggagacggcg
gccatgctggcgttgtccatcagtccagagcagtgtatcaaagtgttgtgtcccattatt
cagtcagctgattacccaatcaacttggctgctatcaagatgcagacgaaggtggtggag
aggattccccgcgagggtctgatcagcatgctgcctgaaatcgtaccgggactcattcag
ggttacgataactcggagagcagcgtgaggaaagcctgcgtgttctgcctggtggcgctc
tacgccgtgataggagaggacctcaaaccgcacctcagccaactctccagtagcaagctg
aagctgttgaacctgtacatcaagcgcgcccagtcgggctccagcggtggcgagccctcg
tcggagggtctttag
DBGET
integrated database retrieval system
